GBrowse Details

Vigan.01G396600.01

Basic Information:
Name: Vigan.01G396600.01
Multiple alignment
Variant Information
Position: Chr01:53550932..53554700 (+ strand)
Length: 3769
Functional Information:
Description: Similar to serine/threonine-protein kinase AFC2-like. [XP_004515857.1, Cicer arietinum]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:160.22,125.85,49.84,72.94,39.65,31.91,59.31,60.43
Arabidopsis thaliana homolog: AT3G53570.1, AT4G24740.1, AT4G32660.1
Automatic updates:
Name: NM_001255351 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max serine/threonine-protein kinase AFC2-like (LOC100804452), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001255690 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max serine/threonine-protein kinase AFC2-like (LOC100804022), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:53550932..53551064 (+ strand)
Length: 133
Type: five_prime_UTR
Position: Chr01:53551065..53551163 (+ strand)
Length: 99
Type: CDS
Position: Chr01:53552023..53552215 (+ strand)
Length: 193
Type: CDS
Position: Chr01:53552522..53552702 (+ strand)
Length: 181
Type: CDS
Position: Chr01:53552806..53552854 (+ strand)
Length: 49
Type: CDS
Position: Chr01:53552944..53553058 (+ strand)
Length: 115
Type: CDS
Position: Chr01:53553256..53553347 (+ strand)
Length: 92
Type: CDS
Position: Chr01:53553603..53553753 (+ strand)
Length: 151
Type: CDS
Position: Chr01:53553851..53553915 (+ strand)
Length: 65
Type: CDS
Position: Chr01:53553996..53554093 (+ strand)
Length: 98
Type: CDS
Position: Chr01:53554176..53554278 (+ strand)
Length: 103
Type: CDS
Position: Chr01:53554377..53554523 (+ strand)
Length: 147
Type: CDS
Position: Chr01:53554524..53554700 (+ strand)
Length: 177
Type: three_prime_UTR

>Vigan.01G396600.01 class=Sequence position=Chr01:53550932..53554700 (+ strand)
CACGGTCGTT ATTATTGGGC TAACATCGAG ATTAGGGTTT CAGAAGCTGA GGCTCTATCT TCACACAAGC ATATTTTCTC
TTTCATCTTA ATCTGTCTTT CTCTACTTTG AAGTTTTCGT AGTTGTTCGA ATCATGGAGA TGGAACGCGT TTTCGAATTT
CCCCATTCTC ATATGGATCG GCGACCGAGA AAGAGAGCGA GGTTGGGCTG GGACATTCCT GAGGTCCCTA AGGTAGCTTT
TTCACCCTAA AATCCCAGAT CTGATAATTC TTTTTCTCTT CTTGCTCTAT TATCTTTTCT GCGTGTAGAT CTGGTGGAAT
ATGTGTATAT TAGGTTTTGT TTCGATCAGG TAACGTTTCC TTTTGCTCGC AGGGTTTGTT TGACGATATT TTCTGTTTTA
TTGATCGGAT CTGTTAGTTT TTTCCCTTTT ACCCAATATT GCGTGACTGT GTATCGGTAG AACAGTTGAT CTTCATTATT
TTAATCATTT GTCTTTATTT TTGTTTGTTT AATTAATATG TGGTCTCTCT GGTAAATTTG TTTTGATTTA TATGTGCATA
GATCTGATTT TGATAAATAT AGATTTTCGT TATCGCTTTT AAGAATGAAG ATTCACTTGC TTCTTACAGT TTCTGTTCTT
CCTGTATGAC TTTTATTGAC GCGATTCTCT GTGTTCACAT TTTTATAAAT ATTTTCCAAA CTTCAAATTT GTAATTTACA
CCATCAGATC ATTCGTTTTC ATGTGGTGCA TAATAGTTTT CGAAATCATC ATTCGTAAAT AGGGCATCTG TTATTCAAGA
TCTAATGTTT GAAACCTTAC ACAGTGTGAA TTTGTTTAAT TTATTGCATG TTATTTCATT CTAAAGTGAA TTATTGAAAT
TTGTTTCAAT ACTTGTCCTT TCGTTTGTCT TGCCCTATAT AATTAAATTT TCTACTGGAG CTCCCCTGGA GCTCCCTTGC
TTATTTGTTT AATTTCTTCT TTTTGGGTTA TATTTTGAGT TGGTGGTGAG AGCGTAGGTT GCGTTAATTA CACTGGGTGG
AGTTTTATTT TTTAACTATT GAGTGGTGCA TGAATGGATG GCTGTGTGTA GGCTCAGGTA GGATTGTTTT GTGGACAAGA
TGTTGGGGCT ATTTCAAGCT ATGCTCCTTC AAGGGGTCCC TCAGAACATA CCACTTGTTC CCTATTTGTT AAGGCTGTTG
CTCAAAATGG TTCTCCCCCT TGGCGAGATG ATGACAAAGA TGGACATTAC ATGTTTGCGC TTGGAGATAA TTTAACTTCT
CGCTGTAATT ACACTTACCA TCATTAAGAA ATTTACATTC ATAGTTAATA TTTTTAGTTT GTTTGTGAAA CTCAGCATTC
ACATGCATAA GCATGTTCGC AACCTGAACT TTTTAATTGT GGACATATTT TATGTTTTTT TAATACCTTA AAACAATTAT
TCCTGTTTCA ATTGTAGATT TTTTTTATCT TATTGAGTTT TTAATCTAGT GTGGATAAAC ATATGGGCAG TATATGTTCA
AGTGGATGTT ACAGTTCACT TCATTGGCTA GGGTTGCATT GTTTATATGT TTGTGTAAAT ATGTCTGCAG ATAAGATCCA
TAGCAAAATG GGTGAAGGAA CTTTTGGGCA GGTCTTAGAA TGCTGGGACC GAGAAAGGAA GGAAATGGTT GCGATTAAAA
TTGTCCGTGG GATAAAGAAG TATCGAGAAG CAGCCATGAT AGAAATTGAG GTGCTTCAAC AGCTTGGTAA ACATGACAAA
GGAGGGAATC GGTAAGTAGA TTAAATCTAA TTTCTGTCCT ATGCTAGTAA AAGCAAAGTA CAGTGTAAAA TCCTTGATTC
CTTTGCATTG GTTAAATGAG CTTATTCCTT GCAGTTGTGT GCAAATACGG AACTGGTTTG ACTATCGTAA TCATATCTGT
ATTGTAAGTA TTTAATTTGT GATGGAATGA TTTCCCCAAT TTACAAATAA TTTGGGGGTT AAGACAACGA TGAATTTAAA
TGGTTTTAAC AGGTGTTTGA GAAACTTGGA CCAAGCTTAT ACGATTTTCT TCGGAAAAAC AATTATCGCT CATTTCCCAT
TGATCTTGTC CGCGAGATTG GCAGACAACT ATTGGAATGT ATAGCATGTG TGTAGTTTAC TTGAACTAGC TTCCTTTTGA
GCTAATTTTT TTTTATCATG TTTCGTTTTG TGTTCTTTAT TGTTATAAAG TAATTGTAAA TGATCTTCAT TATTATATAT
ACTAACTACT ATTGGTGAGT CTTAGACCGT GTTGTTTGTT TAACCATGTT AACTTTCTAA TGAAATAATT TTATGATTTT
GCAGTCATGC ATGATTTGCG GATGATTCAT ACTGACCTGA AGCCTGAAAA TATATTACTA GTTTCGCCAG AGTATGTCAA
AGTGCCTGAC TACAAGGTAC ATTCCTTTCT CAGCATGTGG TTCTTAATTG CCTTTCCACT TATACAAAAC TTGTATGTTT
AACTTTGTTA TTGTTAATTT TTATGTTATA TTGGATTTGA TATTTTAAAA ATTGCCTTCA AAATGCACTT CCTAATCATA
GGTTTAGTTG TCTTTGCTTG ATATGGGTGT TAGTATAAGT ATTCGAGATA GATGGTGATT CGTTCTGTAG TGCCATGTTT
CATTGAATAG ATCCAATGTA TTTTTTTACA GAGTTCGTCT CGATCACCAA GTACCTATTT CAAGAGAGTT CCCAAATCTA
GCGCCATAAA GGTAATTGAT TTTGGCAGCA CCACTTACGA ACGTGATGAT CAGACTTACA TTGTATCAAC TCGTCATTAT
AGGGCGCCTG AAGTTATCCT TGGTATGTTA TATGGAAAGC TGTAGAAGGA ATGCCTGGCT TAACTTGTGT TTGAACGTAT
TATGTCTTAT ACATTTAATT TTTTGCATGT GTGTATTAGG ACTCGGCTGG AGCTATCCAT GCGATATATG GAGTGTAGGA
TGTATATTGG TTGAGTTATG CACGGTGTGT TCAAAACCTT TTATTCATAG AACGATTATC CATCCTTTCT TTTGTACGCT
ATAACTTGTT AATTTCTTTT ACAGGGCGAA GCATTATTCC AGACTCATGA AAATTTAGAA CATCTTGCTA TGATGGAAAG
GGTACTTGGT CCCTTACCGC AGCACATGTT GAAGAGAGTC GAGTAAGTGA CTTACCATGG TAAATTTCAG TTGACCCATC
GTTAATTTAG TTATTGATGT GTCTTTTGTT ATGCAAATGT TCAGCCGAAA TGCGGAGAAG TATGTTAGGA GGGGTAGATT
AGACTGGCCT GAGGGTGCAA CCTCGCGGGA GAGTATCAAA GCTGTAATGA AGCTTCCTAG GTTACAGGTT TGTATGATTT
TTCACTTTCT CATTTTACAT TAAAAGCAAT TTGAATTATT TATACTGATA TTAGTCCGTA TTTTTTTCTC CCCAAATATT
TGCAGAACCT TATAATGCAG CATGTGGATC ATTCAGCAGG CGATCTCATC CATCTGTTGC AGGGATTACT TAGATTTGAT
CCCTCTGAAA GACTTACAGC CAAGGAAGCC CTTAGATATC CCTTCTTTAT GAGAGATCAC TTCAGGAGAT AATATTTAAG
ATATTGTTTC ATTGACCTTC CTAAGGATGT GTACATTTGT GTGGTGTTTG GTTATTCTTC AGCTTTCCTC TCCTCCTTAT
TCAGGGGATT TTGAATCAAT CTGAATTCAA TGTACAGAAG AAAAAATATG TTCTAAGGTT ATGGTGAAAA GTTGGAGATG
TATTTGTAC

>Vigan.01G396600.01
CACGGTCGTT ATTATTGGGC TAACATCGAG ATTAGGGTTT CAGAAGCTGA GGCTCTATCT TCACACAAGC ATATTTTCTC
TTTCATCTTA ATCTGTCTTT CTCTACTTTG AAGTTTTCGT AGTTGTTCGA ATCATGGAGA TGGAACGCGT TTTCGAATTT
CCCCATTCTC ATATGGATCG GCGACCGAGA AAGAGAGCGA GGTTGGGCTG GGACATTCCT GAGGTCCCTA AGGCTCAGGT
AGGATTGTTT TGTGGACAAG ATGTTGGGGC TATTTCAAGC TATGCTCCTT CAAGGGGTCC CTCAGAACAT ACCACTTGTT
CCCTATTTGT TAAGGCTGTT GCTCAAAATG GTTCTCCCCC TTGGCGAGAT GATGACAAAG ATGGACATTA CATGTTTGCG
CTTGGAGATA ATTTAACTTC TCGCTATAAG ATCCATAGCA AAATGGGTGA AGGAACTTTT GGGCAGGTCT TAGAATGCTG
GGACCGAGAA AGGAAGGAAA TGGTTGCGAT TAAAATTGTC CGTGGGATAA AGAAGTATCG AGAAGCAGCC ATGATAGAAA
TTGAGGTGCT TCAACAGCTT GGTAAACATG ACAAAGGAGG GAATCGTTGT GTGCAAATAC GGAACTGGTT TGACTATCGT
AATCATATCT GTATTGTGTT TGAGAAACTT GGACCAAGCT TATACGATTT TCTTCGGAAA AACAATTATC GCTCATTTCC
CATTGATCTT GTCCGCGAGA TTGGCAGACA ACTATTGGAA TGTATAGCAT TCATGCATGA TTTGCGGATG ATTCATACTG
ACCTGAAGCC TGAAAATATA TTACTAGTTT CGCCAGAGTA TGTCAAAGTG CCTGACTACA AGAGTTCGTC TCGATCACCA
AGTACCTATT TCAAGAGAGT TCCCAAATCT AGCGCCATAA AGGTAATTGA TTTTGGCAGC ACCACTTACG AACGTGATGA
TCAGACTTAC ATTGTATCAA CTCGTCATTA TAGGGCGCCT GAAGTTATCC TTGGACTCGG CTGGAGCTAT CCATGCGATA
TATGGAGTGT AGGATGTATA TTGGTTGAGT TATGCACGGG CGAAGCATTA TTCCAGACTC ATGAAAATTT AGAACATCTT
GCTATGATGG AAAGGGTACT TGGTCCCTTA CCGCAGCACA TGTTGAAGAG AGTCGACCGA AATGCGGAGA AGTATGTTAG
GAGGGGTAGA TTAGACTGGC CTGAGGGTGC AACCTCGCGG GAGAGTATCA AAGCTGTAAT GAAGCTTCCT AGGTTACAGA
ACCTTATAAT GCAGCATGTG GATCATTCAG CAGGCGATCT CATCCATCTG TTGCAGGGAT TACTTAGATT TGATCCCTCT
GAAAGACTTA CAGCCAAGGA AGCCCTTAGA TATCCCTTCT TTATGAGAGA TCACTTCAGG AGATAATATT TAAGATATTG
TTTCATTGAC CTTCCTAAGG ATGTGTACAT TTGTGTGGTG TTTGGTTATT CTTCAGCTTT CCTCTCCTCC TTATTCAGGG
GATTTTGAAT CAATCTGAAT TCAATGTACA GAAGAAAAAA TATGTTCTAA GGTTATGGTG AAAAGTTGGA GATGTATTTG
TAC

>Vigan.01G396600.01
ATGGAGATGG AACGCGTTTT CGAATTTCCC CATTCTCATA TGGATCGGCG ACCGAGAAAG AGAGCGAGGT TGGGCTGGGA
CATTCCTGAG GTCCCTAAGG CTCAGGTAGG ATTGTTTTGT GGACAAGATG TTGGGGCTAT TTCAAGCTAT GCTCCTTCAA
GGGGTCCCTC AGAACATACC ACTTGTTCCC TATTTGTTAA GGCTGTTGCT CAAAATGGTT CTCCCCCTTG GCGAGATGAT
GACAAAGATG GACATTACAT GTTTGCGCTT GGAGATAATT TAACTTCTCG CTATAAGATC CATAGCAAAA TGGGTGAAGG
AACTTTTGGG CAGGTCTTAG AATGCTGGGA CCGAGAAAGG AAGGAAATGG TTGCGATTAA AATTGTCCGT GGGATAAAGA
AGTATCGAGA AGCAGCCATG ATAGAAATTG AGGTGCTTCA ACAGCTTGGT AAACATGACA AAGGAGGGAA TCGTTGTGTG
CAAATACGGA ACTGGTTTGA CTATCGTAAT CATATCTGTA TTGTGTTTGA GAAACTTGGA CCAAGCTTAT ACGATTTTCT
TCGGAAAAAC AATTATCGCT CATTTCCCAT TGATCTTGTC CGCGAGATTG GCAGACAACT ATTGGAATGT ATAGCATTCA
TGCATGATTT GCGGATGATT CATACTGACC TGAAGCCTGA AAATATATTA CTAGTTTCGC CAGAGTATGT CAAAGTGCCT
GACTACAAGA GTTCGTCTCG ATCACCAAGT ACCTATTTCA AGAGAGTTCC CAAATCTAGC GCCATAAAGG TAATTGATTT
TGGCAGCACC ACTTACGAAC GTGATGATCA GACTTACATT GTATCAACTC GTCATTATAG GGCGCCTGAA GTTATCCTTG
GACTCGGCTG GAGCTATCCA TGCGATATAT GGAGTGTAGG ATGTATATTG GTTGAGTTAT GCACGGGCGA AGCATTATTC
CAGACTCATG AAAATTTAGA ACATCTTGCT ATGATGGAAA GGGTACTTGG TCCCTTACCG CAGCACATGT TGAAGAGAGT
CGACCGAAAT GCGGAGAAGT ATGTTAGGAG GGGTAGATTA GACTGGCCTG AGGGTGCAAC CTCGCGGGAG AGTATCAAAG
CTGTAATGAA GCTTCCTAGG TTACAGAACC TTATAATGCA GCATGTGGAT CATTCAGCAG GCGATCTCAT CCATCTGTTG
CAGGGATTAC TTAGATTTGA TCCCTCTGAA AGACTTACAG CCAAGGAAGC CCTTAGATAT CCCTTCTTTA TGAGAGATCA
CTTCAGGAGA TAA

>Vigan.01G396600.01
MEMERVFEFP HSHMDRRPRK RARLGWDIPE VPKAQVGLFC GQDVGAISSY APSRGPSEHT TCSLFVKAVA QNGSPPWRDD
DKDGHYMFAL GDNLTSRYKI HSKMGEGTFG QVLECWDRER KEMVAIKIVR GIKKYREAAM IEIEVLQQLG KHDKGGNRCV
QIRNWFDYRN HICIVFEKLG PSLYDFLRKN NYRSFPIDLV REIGRQLLEC IAFMHDLRMI HTDLKPENIL LVSPEYVKVP
DYKSSSRSPS TYFKRVPKSS AIKVIDFGST TYERDDQTYI VSTRHYRAPE VILGLGWSYP CDIWSVGCIL VELCTGEALF
QTHENLEHLA MMERVLGPLP QHMLKRVDRN AEKYVRRGRL DWPEGATSRE SIKAVMKLPR LQNLIMQHVD HSAGDLIHLL
QGLLRFDPSE RLTAKEALRY PFFMRDHFRR *