GBrowse Details

Vigan.01G357900.01

Basic Information:
Name: Vigan.01G357900.01
Multiple alignment
Variant Information
Position: Chr01:49242391..49247232 (+ strand)
Length: 4842
Functional Information:
Description: Similar to formamidase-like isoform X2. [XP_004509072.1, Cicer arietinum]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (GO:0016811)
InterPro: Acetamidase/Formamidase (IPR004304)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:38.79,0.04,8.51,102.02,2.58,18.19,1.28,9.11
Arabidopsis thaliana homolog: AT4G37550.1, AT4G37560.1
Structure :
Position: Chr01:49242391..49242925 (+ strand)
Length: 535
Type: five_prime_UTR
Position: Chr01:49242926..49243144 (+ strand)
Length: 219
Type: CDS
Position: Chr01:49243463..49243700 (+ strand)
Length: 238
Type: CDS
Position: Chr01:49243779..49243969 (+ strand)
Length: 191
Type: CDS
Position: Chr01:49244932..49245167 (+ strand)
Length: 236
Type: CDS
Position: Chr01:49245293..49245536 (+ strand)
Length: 244
Type: CDS
Position: Chr01:49245820..49245927 (+ strand)
Length: 108
Type: CDS
Position: Chr01:49246923..49247054 (+ strand)
Length: 132
Type: CDS
Position: Chr01:49247055..49247232 (+ strand)
Length: 178
Type: three_prime_UTR

>Vigan.01G357900.01 class=Sequence position=Chr01:49242391..49247232 (+ strand)
AACAATTTAT AATAAAAAAT ACATATAAAA TAAATAAAAT TTATTATTTA CTATAATAAT TATTTATATT TATTTTTATA
ATTATAATTT TATTTTATTT TATATCAAAG AAAAGAACAC ATGTTTTCAC TTGGTTAATC ATAAATAAGT TACCCTATTT
TTTATTATTT TAATAATACA AATCAAACAT TAATCATTCA GTTATTGTAC CGAATCAAAG ATTAATCATT CAGTTATCCT
ACACAGTTTA AATTTAATGG TATGATATTT GGTCTTGATT AAGGAGCTTT ATGTGATCTC TTAAGATATT ATAGTGAATC
ATGTAATTAA GAAAAACGGT ATGCACGAAA TGAATAGATG CCACACGCTT TCATCGATGA CTACAACATT GTTTTCTGGG
ACCAGCAAAG TGTGGTCCTT CCACCAATTG AAAACCGATC CCCTTTCGTC ACCGTAATGC TAAACTATGT GAGAACAGTA
TCTATCTAGA GTCTTCACCA AATCCAACAG TATGTGAGAA CACATCAATT TGTCCATGGC ACCACCAACT ACAAGACTGG
TTTCGTCAAT AGATTTGAAG AAGAAGCCAT GGCAGCAAAA CCCTCCTCTC CACAACCGAT GGCACCCTCA CATACTACAC
GTAGCCACTG TTAACACTGG TCATGTCTTT AGAGTAGAGA TGGTAGATTG GACAGGAGGC GCAATTAGAG ATGATGATTC
ACCACTCGAC GTAAAATCCA TAGACCTCTC AACTGTAAGT ACAAAGCTCA TCACCACTCC AGGTGTTACA ACTTAATTAC
TAAACCTGAT TTTGGATATT AATTATCGAC AAAGGAACCA ACAAAACTAT ACATATATAG ACAAACCAAA CATGTAGACC
AAACTGTTGA AAACTATACC TGTTTCTTTC TCAAGTATAT ATACACTTTA TAACTGTGTA AATAACAAAT TTAATGCATT
ATAAGTGTAG TTAGTAATTC CTAATCACAT GGAAAAAGAG TAAAGGAAGG AAATTTACAT GGCTTTGTGT AATTAATTAA
CTTTGGCTGT TGTGGGGCGA ATGGATGATA AGGTACATTA TCTTAGTGGG CCAATTAGAA TTGTGGATGA TGATGGGATC
CCAGCCAAGC CTGGAGATCT GCTTGCTGTT GAAATATGCA ACTTGGGTCC TCTACCTGGT GATGAATGGG GTTTTACTGC
AACATTTGAC AGAGAAAATG GAGGTGGCTT CTTAACAGAC CATTTTCCTT GTGCCACAAA AGCTATCTGG TACTTTGAGG
GAATATATGC TCATTCACCT CAGATACCAG GTGAACATCT CATATGAAGA CACTTGTGCA TATTTATTTC GCTAACCGCT
ACTCATGTAG TTTGTTTATT CTGCAAAGGA GTACGATTTC CAGGTTTAAC GCACCCCGGG ATAATTGGAA CTGCACCATC
AATGGAACTC CTCAACATAT GGAATGAACG GGAGAGAGAT ATAGAAGAAA ATGGTGTTAA GTCTTTCAAA CTCTGTGAGG
TTTTGCATAC TCGACCTTTG GCAAACTTGC CATCAACAAA TGGCTGTCTC CTTGGAAAGG TAATAATCAA TTCATCTCCA
GAATGTCTAT AAATTTAATC TGATCATAGG TCATTTGACT ACCACATATG AATTAAAGAT CCAGAATTAT TTTAGATTTC
TACATATTTA TGTCTCGTGC TGATTTTTGA GAAAGTTCAA GATATTATAT TAATTAGGAT TTTATTATTT GTACTCTTAG
ACTTAAACTT TAATCATACT ATATACATTT AATACAAAAT TAAGAGAAAT TAGAAAACGA TAGAAAAGTA ATTTATTTAA
TAGAAAAATT TATAACAATT TAAGAAATAA TATTTATTAT ATTTTTTAAT TCTAAAGTTA AAGTCTTAAG TGAAAAAATT
ATTAGTAGTT TAAAATGATA ATATAACACC TTAAAACAAA AAGAAACTCT CTCAAGAAAT CAGTAAAACA TTGCTTCTAA
AATAAATCAC ACTCGTAGGT TTTTTTTAGG GCAAGATAGA TAAAACAGTA AATTTTCTCC ATTTCATCTT CCCAGAATTA
TATGTGGTAT AAAACTAGTC AAATAATAAA ATACACTCTA ACCTACCACA GAAATCTAAA CTAGTGAAAT CATCATCATT
CGTATCAATA AGCGTCGGTT TTCTTAAATA ACAGACGAGA TAATTTGTTT AGTTCAGCAG ATTAAATAAG ATTTATCGGG
CATTTAACGG TTTCACCCAT CAATCGGGTA TTAACTTTTT TTTTAACTGA AAAAATGTGA TTAGTTTAAT GTAGAAATTG
ACTGAAACCA GATGATTTTA GAGCACCCTC CCTAAAATAA GGAAAAAGAC TTGAATCATA GTAGTTCCCT ATATGAGACT
ATCAGGTCAA AGCAAACTAA TCTTGATCCA AAAGTTCACA AAAAGTATTA AGAATTTGAG CGATGCTTTG TTAACATGCT
AAGAAATCAA GCAAGATTTT CCATTGTGTT GTTTTAAATC CTTTTCCTGA CATGGTTCTA GGTTGAAAAA GGCTCTAGTG
AATGGGAGAG GATTGCAAAG GAAGCTGCAA GAACAATACC AGGACGAGAA AATGGTGGGA ATTGTGACAT AAAAAACCTT
AGTAGAGGGG CAAAGGTATA CCTCCCAGTT TTTGTGGAAG GAGCAAATCT CAGCACCGGT GACATGCACT TTTCACAGGG
CGATGGCGAG GTCTCCTTCT GTGGTGCAAT CGAGATGAGT GGTTTCTTAG AACTCAAGTT AGTATAACTT CAGTTACTCA
AATATCACCT AACTCTGCCA CTGCAAATGT AGCTAAAACT CATGTTAAAA ATGAAAGATT ATTTATTATA TGAAGAGATG
ATAATAGTTT TGGTGTAATC AGGTGCGAAA TTATAAGAGG TGGAATGAAA GAGTACCTTA CACCAATGGG ACCCACTCCC
CTTCATGTAA ACCCAATTTT TGAGATAGGC CCTGTTGAGC CAAGATTCTC AGAGTGGCTA GTTTTCGAGG GAATCAGTGT
TGATGAAAGT GGGAGACAAC ACTACCTAGA TGCAAGTGTT GCATACAAGC GAGCAGTGCT CAATGCCATC GACTACATAT
CCAAGTTTGG ATACTCCAAA GAACAGGTTT AGCTCTTTTC TCATTCTTGT ACCATTTCCA CATTGTATGA TTAAATGCTA
AGGTTGTGAT TGTTTTATCA TCATGTGTGT CCAGTAAATT TAATTTTACA TGTTTGGCTT TTCTAACAAA TAGTTTTCAC
ATTAATTATA TTTAGTCTCA AACTAAGTTA CGGCTGAAAA TAATATATTC AACTTGTTTT TTAAAATCCA GATGAAATGT
GTTTGATTTT AAGTTTGAAA TGTTAATTTA TTCAAATTAA ACATGCACTG GTATGTTGCA CATCATCAGG TGTACCTGTT
GCTGTCTTGC ATTCCTTGTG AAGGAAGAAT ATCTGGAATA GTCGATGCCC CCAATGCTGT GGCAACCCTG GCCATTCCAA
CAGCTATATT TGACCAGGTA AAATACTTTT AATTAAGCAC CACCATTGTT ATTCACACAT GTAAACTCAC AATTACTACA
AATTTACAAT AAATGCTTAT TTAAATATGA TTTACTAAGA CTATAGTGAC TTAAAATATT ACTCACAAAA AAAATTAAAC
TTTTTAACAA AAAGAACTAT CAAATGTTCA TACTTTTCAA GATGTTTTTA AACATTAACG GGGTGTCTAT TAGTACTTTT
ATCAGAAGTC GGCCAAGTTC AAACACAAAG GACATGCCAT CTTATTTCTA TGTTAACCTA GTTTTGGCTA AAATTGAGAT
ACAAATAAAG AAAACAAAGG AATATACAAA CTAACTAGGG TATGCTAATA AAACAAAGGT TAGGATCAAT AGAGCACATG
TAAAGTTCAA ACTCTTAATT TGCACAAGAG CTATTCCTAC GAAAAAAACC TTTTCAAAAT GCCAACTTTG TGTGACTTGC
ACCAAGTAGT TCAAACAATA CAAGTTGTTC TAGATGAAGA AATGCTTTTG ACAAGAACAA GGGACGATCC ATCTTTATAA
TTATCTGTGC TCAACAGATT GATCAGCTCA CTCTGGTATT CCTTCCTTTA GACTTTCCAT TGTTTCAAAT AAATGTAAGC
TTCCAACCTT CATGTCTTTT GCTTAGTGTC TTGTTCCAAA ACTTTGTACT TTTGTACTCC TTCCTGTATA GAAATAATCC
AGCACACATC CATATTCCTA TTTTCCATTT TTCTACTTAC ACTCATCATT ATACATTAAA TATATATTTC AATACATTAA
GTATTCAAAT GAGAAATTCA ATGTGCATGA AACAATTTTA GAAGACATCG AGTCATGACC CTCAAAATCT ACACATATTA
ATTTAAGACA TGGTACAGGA TGAATACACC ATGTAGGATA TGAAAAGGCT AGAGATCCTT ACTTGTTCTT CACAGTTATT
TTAATAAAAG AGATTAATTA GCTTGTAATA ATGGGTTTTA TGCTATATGC AGGATATTCG TCCTAAAAAT AACAAGGTAC
CAGTTGGGCC CCGACTTATG AGAAAACCAG ATGTTTTCAA ATGCACTTAC GATGGAAATT TGCCCATTAC AAAGAATCCT
ATGCCACATC ATGATTCATA TTAACTACAC GGGAAAAATA AATTTAATAT CAACATTTAT ATGTATGTTG TTGTTCCTCG
ACCGTTGAGA AAAATTAGTG ACCTATATTA TAATAAATCT TTACAATTTC GTGATTTCTT TTTTTGTATT GTTCTTGTAC
ATGATTCTAT TATCCAACTT CTCTCTTTTA TTTAACTAAC AT

>Vigan.01G357900.01
AACAATTTAT AATAAAAAAT ACATATAAAA TAAATAAAAT TTATTATTTA CTATAATAAT TATTTATATT TATTTTTATA
ATTATAATTT TATTTTATTT TATATCAAAG AAAAGAACAC ATGTTTTCAC TTGGTTAATC ATAAATAAGT TACCCTATTT
TTTATTATTT TAATAATACA AATCAAACAT TAATCATTCA GTTATTGTAC CGAATCAAAG ATTAATCATT CAGTTATCCT
ACACAGTTTA AATTTAATGG TATGATATTT GGTCTTGATT AAGGAGCTTT ATGTGATCTC TTAAGATATT ATAGTGAATC
ATGTAATTAA GAAAAACGGT ATGCACGAAA TGAATAGATG CCACACGCTT TCATCGATGA CTACAACATT GTTTTCTGGG
ACCAGCAAAG TGTGGTCCTT CCACCAATTG AAAACCGATC CCCTTTCGTC ACCGTAATGC TAAACTATGT GAGAACAGTA
TCTATCTAGA GTCTTCACCA AATCCAACAG TATGTGAGAA CACATCAATT TGTCCATGGC ACCACCAACT ACAAGACTGG
TTTCGTCAAT AGATTTGAAG AAGAAGCCAT GGCAGCAAAA CCCTCCTCTC CACAACCGAT GGCACCCTCA CATACTACAC
GTAGCCACTG TTAACACTGG TCATGTCTTT AGAGTAGAGA TGGTAGATTG GACAGGAGGC GCAATTAGAG ATGATGATTC
ACCACTCGAC GTAAAATCCA TAGACCTCTC AACTGTACAT TATCTTAGTG GGCCAATTAG AATTGTGGAT GATGATGGGA
TCCCAGCCAA GCCTGGAGAT CTGCTTGCTG TTGAAATATG CAACTTGGGT CCTCTACCTG GTGATGAATG GGGTTTTACT
GCAACATTTG ACAGAGAAAA TGGAGGTGGC TTCTTAACAG ACCATTTTCC TTGTGCCACA AAAGCTATCT GGTACTTTGA
GGGAATATAT GCTCATTCAC CTCAGATACC AGGAGTACGA TTTCCAGGTT TAACGCACCC CGGGATAATT GGAACTGCAC
CATCAATGGA ACTCCTCAAC ATATGGAATG AACGGGAGAG AGATATAGAA GAAAATGGTG TTAAGTCTTT CAAACTCTGT
GAGGTTTTGC ATACTCGACC TTTGGCAAAC TTGCCATCAA CAAATGGCTG TCTCCTTGGA AAGGTTGAAA AAGGCTCTAG
TGAATGGGAG AGGATTGCAA AGGAAGCTGC AAGAACAATA CCAGGACGAG AAAATGGTGG GAATTGTGAC ATAAAAAACC
TTAGTAGAGG GGCAAAGGTA TACCTCCCAG TTTTTGTGGA AGGAGCAAAT CTCAGCACCG GTGACATGCA CTTTTCACAG
GGCGATGGCG AGGTCTCCTT CTGTGGTGCA ATCGAGATGA GTGGTTTCTT AGAACTCAAG TGCGAAATTA TAAGAGGTGG
AATGAAAGAG TACCTTACAC CAATGGGACC CACTCCCCTT CATGTAAACC CAATTTTTGA GATAGGCCCT GTTGAGCCAA
GATTCTCAGA GTGGCTAGTT TTCGAGGGAA TCAGTGTTGA TGAAAGTGGG AGACAACACT ACCTAGATGC AAGTGTTGCA
TACAAGCGAG CAGTGCTCAA TGCCATCGAC TACATATCCA AGTTTGGATA CTCCAAAGAA CAGGTGTACC TGTTGCTGTC
TTGCATTCCT TGTGAAGGAA GAATATCTGG AATAGTCGAT GCCCCCAATG CTGTGGCAAC CCTGGCCATT CCAACAGCTA
TATTTGACCA GGATATTCGT CCTAAAAATA ACAAGGTACC AGTTGGGCCC CGACTTATGA GAAAACCAGA TGTTTTCAAA
TGCACTTACG ATGGAAATTT GCCCATTACA AAGAATCCTA TGCCACATCA TGATTCATAT TAACTACACG GGAAAAATAA
ATTTAATATC AACATTTATA TGTATGTTGT TGTTCCTCGA CCGTTGAGAA AAATTAGTGA CCTATATTAT AATAAATCTT
TACAATTTCG TGATTTCTTT TTTTGTATTG TTCTTGTACA TGATTCTATT ATCCAACTTC TCTCTTTTAT TTAACTAACA
T

>Vigan.01G357900.01
ATGGCACCAC CAACTACAAG ACTGGTTTCG TCAATAGATT TGAAGAAGAA GCCATGGCAG CAAAACCCTC CTCTCCACAA
CCGATGGCAC CCTCACATAC TACACGTAGC CACTGTTAAC ACTGGTCATG TCTTTAGAGT AGAGATGGTA GATTGGACAG
GAGGCGCAAT TAGAGATGAT GATTCACCAC TCGACGTAAA ATCCATAGAC CTCTCAACTG TACATTATCT TAGTGGGCCA
ATTAGAATTG TGGATGATGA TGGGATCCCA GCCAAGCCTG GAGATCTGCT TGCTGTTGAA ATATGCAACT TGGGTCCTCT
ACCTGGTGAT GAATGGGGTT TTACTGCAAC ATTTGACAGA GAAAATGGAG GTGGCTTCTT AACAGACCAT TTTCCTTGTG
CCACAAAAGC TATCTGGTAC TTTGAGGGAA TATATGCTCA TTCACCTCAG ATACCAGGAG TACGATTTCC AGGTTTAACG
CACCCCGGGA TAATTGGAAC TGCACCATCA ATGGAACTCC TCAACATATG GAATGAACGG GAGAGAGATA TAGAAGAAAA
TGGTGTTAAG TCTTTCAAAC TCTGTGAGGT TTTGCATACT CGACCTTTGG CAAACTTGCC ATCAACAAAT GGCTGTCTCC
TTGGAAAGGT TGAAAAAGGC TCTAGTGAAT GGGAGAGGAT TGCAAAGGAA GCTGCAAGAA CAATACCAGG ACGAGAAAAT
GGTGGGAATT GTGACATAAA AAACCTTAGT AGAGGGGCAA AGGTATACCT CCCAGTTTTT GTGGAAGGAG CAAATCTCAG
CACCGGTGAC ATGCACTTTT CACAGGGCGA TGGCGAGGTC TCCTTCTGTG GTGCAATCGA GATGAGTGGT TTCTTAGAAC
TCAAGTGCGA AATTATAAGA GGTGGAATGA AAGAGTACCT TACACCAATG GGACCCACTC CCCTTCATGT AAACCCAATT
TTTGAGATAG GCCCTGTTGA GCCAAGATTC TCAGAGTGGC TAGTTTTCGA GGGAATCAGT GTTGATGAAA GTGGGAGACA
ACACTACCTA GATGCAAGTG TTGCATACAA GCGAGCAGTG CTCAATGCCA TCGACTACAT ATCCAAGTTT GGATACTCCA
AAGAACAGGT GTACCTGTTG CTGTCTTGCA TTCCTTGTGA AGGAAGAATA TCTGGAATAG TCGATGCCCC CAATGCTGTG
GCAACCCTGG CCATTCCAAC AGCTATATTT GACCAGGATA TTCGTCCTAA AAATAACAAG GTACCAGTTG GGCCCCGACT
TATGAGAAAA CCAGATGTTT TCAAATGCAC TTACGATGGA AATTTGCCCA TTACAAAGAA TCCTATGCCA CATCATGATT
CATATTAA

>Vigan.01G357900.01
MAPPTTRLVS SIDLKKKPWQ QNPPLHNRWH PHILHVATVN TGHVFRVEMV DWTGGAIRDD DSPLDVKSID LSTVHYLSGP
IRIVDDDGIP AKPGDLLAVE ICNLGPLPGD EWGFTATFDR ENGGGFLTDH FPCATKAIWY FEGIYAHSPQ IPGVRFPGLT
HPGIIGTAPS MELLNIWNER ERDIEENGVK SFKLCEVLHT RPLANLPSTN GCLLGKVEKG SSEWERIAKE AARTIPGREN
GGNCDIKNLS RGAKVYLPVF VEGANLSTGD MHFSQGDGEV SFCGAIEMSG FLELKCEIIR GGMKEYLTPM GPTPLHVNPI
FEIGPVEPRF SEWLVFEGIS VDESGRQHYL DASVAYKRAV LNAIDYISKF GYSKEQVYLL LSCIPCEGRI SGIVDAPNAV
ATLAIPTAIF DQDIRPKNNK VPVGPRLMRK PDVFKCTYDG NLPITKNPMP HHDSY*