GBrowse Details

Vigan.01G329900.01

Basic Information:
Name: Vigan.01G329900.01
Multiple alignment
Variant Information
Position: Chr01:45873045..45875034 (+ strand)
Length: 1990
Functional Information:
Description: Similar to Epoxide hydrolase 2-like protein. [T2DLH1, Phaseolus vulgaris]
GO: Molecular Function: catalytic activity (GO:0003824)
InterPro: Alpha/beta hydrolase fold-1 (IPR000073)
Epoxide hydrolase-like (IPR000639)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.38,0.02,3.45,3.24,8.09,1.70,13.43,1.38
Arabidopsis thaliana homolog: AT3G51000.1
Automatic updates:
Name: NM_001253205 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max epoxide hydrolase 2-like (LOC100809053), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:45873045..45873187 (+ strand)
Length: 143
Type: five_prime_UTR
Position: Chr01:45873188..45873487 (+ strand)
Length: 300
Type: CDS
Position: Chr01:45873622..45873804 (+ strand)
Length: 183
Type: CDS
Position: Chr01:45873948..45874189 (+ strand)
Length: 242
Type: CDS
Position: Chr01:45874581..45874845 (+ strand)
Length: 265
Type: CDS
Position: Chr01:45874846..45875034 (+ strand)
Length: 189
Type: three_prime_UTR

>Vigan.01G329900.01 class=Sequence position=Chr01:45873045..45875034 (+ strand)
TAGACAGAAA TGTTGTGGTT AACAAGTCAG AGTTGGGGTT TGACCCAAGG CATGACATTT AAGAGTGTCT TGAAGACATG
TTTCATCTTC TTCATTCATT CTTAAGGAAC ATCGTACTTT GGTTGATTTG ATCCTCGAAG GTTATGGAGC ACTTAGAGTT
GGTGAATGAA GTGAAACACC AAAGAATCAA AGCCAACGGG ATATGGTTAC ATGTGGCAGA GAAAGGAACA GGCCCACTTG
TTCTTCTGCT TCATGGCTTC CCAGAACTAT GGTATGCCTG GCGCCACCAG ATCAATTACT TGGCCCAACA TGGCTATCAT
GCAGTTGCAC CTGATCTAAG AGGCTATGGT GACTCCGATT CTCCTATTGA ACCTACTTCC TACACTTGTC ACCACGTTGT
AGGTGACCTT ATAGCTTTGC TTGACCATTT TGGTGAACAA CAGGTATCAA AATGTTCTCA TTTCTTTTTC TTTCTTTCTA
AACTTGCATA CATTTTTTGT ATGAGTATAT ATATACATGA TCATGCTTCC TTTTTATGTC TTGTTCTTTC TGTTTTTGAC
CCACTTGAAC AATACAGGCA TTTGTCGTTG GATCTGATTG GGGATCAACA ATTGGATGGC ATCTGAGTCT GTTTAGACCT
GACAGAGTAA AAGGATTTGT TGCTTTGGGT GTTCCTTTCC ACCCAAGATC ACCCACCAGT AAAACGGTTG AAACTATCAG
AAAATTATTT GGAGATCAGA GTCATGTCTG CCAATTCCAG GTTCCCTTTA CTTGCTGTTT GTTTTGACAT TTTTATGTAT
TTAAAAACAT GAATTTTATG ACAAATCTAA GATTTGTGCT TGCCTGAATT GCTTTTAGTG ATGCACATGA TGGTGTGATT
TATTTGTTGT GTTGGGTATG CAGGAACCAG GCAGAGCAGA GAGAGCTTTC GCTAGATATG ATTATCTGAC AGTGATGAAG
AAGTTTATTC TGATGATACA TACAGATTTT CTAGCATCTC CAGAAGGCAT GGAGCTAATT GATTTCCTGC CGACACCTTC
TGTTGTGCCA TCATGGATAA CTGAGGAAGA ACTCACGGTT TTTGCAGACA AATTCCAAGA ATCTGGTTTT ACTGGTCCAC
TCAATTATTA CCGTGCAATG GACTTGTAAG TATTTTCATC ACTGCTTTTT TTGCTTAATT TTAAAACATA ATCATTCAAT
TCCTTGAGAA GTACGCAATG CAACTTTGAA TTCTCTACTA TAGTCAAACT TGGAGAAAAA ACAGCTCTTT TTTTGGCGGC
TGATAGCACT TATAAAATTG TATATAAGTT GTGGGCTAAT TTTATATTAT ATTTCCAACA ATTTAATTTG ACAAAGATAA
ATTTAAACTA AGTTGACTTC TGAGCTAAGC ATAAACTATT TCATCTTATC ATAAACTATT CTTCTTATAT GATGCTTCTC
ACACACGCGA CATAGAGTAA AAATAAAATC CGACAGATGT TATTTGTTAG TGAAAGAACT CACCTTTTTA CTTACGCTGA
TGGTCTATGG TTACAGAAAC TGGGAGCTTC TTGCACCATG GCAAGGATCA AAGGTAACAG TTCCAACGAA GTTCATAGCA
GGAAACAAAG ACATGGCTTT TGATCTTGAA ACATTTGGTA CAAAGGCTTT TTTGGAAAGT GGTACTTTCA AGAGTCTTGT
TCCCAACCTT GAAGTTGTTA TTATAGACGG CCACCATTTT ATCCATCAAG AAAAAGCCCA ACAAATTTCG GACGAAATCC
TTTCCTTCAT CCGTAAATTC CCCCCCAATG CTTCCATATA ACGTTGCCGA TTTATGTACC TTTTATTTTT TGGTGTATTT
TTAGCTATTT ATATTGTTGT TTGTTAAAAA AAAAACTCCT GGATTTCCAT TGTTAATTAT TTACAATTTT ACGTAACTAG
AATTGTGGGT TTCTGTAAGA GAAAGGCAAA CGAATCATCC ATTTAAAAAG TCCATAATTT ATAGGAGTAA 

>Vigan.01G329900.01
TAGACAGAAA TGTTGTGGTT AACAAGTCAG AGTTGGGGTT TGACCCAAGG CATGACATTT AAGAGTGTCT TGAAGACATG
TTTCATCTTC TTCATTCATT CTTAAGGAAC ATCGTACTTT GGTTGATTTG ATCCTCGAAG GTTATGGAGC ACTTAGAGTT
GGTGAATGAA GTGAAACACC AAAGAATCAA AGCCAACGGG ATATGGTTAC ATGTGGCAGA GAAAGGAACA GGCCCACTTG
TTCTTCTGCT TCATGGCTTC CCAGAACTAT GGTATGCCTG GCGCCACCAG ATCAATTACT TGGCCCAACA TGGCTATCAT
GCAGTTGCAC CTGATCTAAG AGGCTATGGT GACTCCGATT CTCCTATTGA ACCTACTTCC TACACTTGTC ACCACGTTGT
AGGTGACCTT ATAGCTTTGC TTGACCATTT TGGTGAACAA CAGGCATTTG TCGTTGGATC TGATTGGGGA TCAACAATTG
GATGGCATCT GAGTCTGTTT AGACCTGACA GAGTAAAAGG ATTTGTTGCT TTGGGTGTTC CTTTCCACCC AAGATCACCC
ACCAGTAAAA CGGTTGAAAC TATCAGAAAA TTATTTGGAG ATCAGAGTCA TGTCTGCCAA TTCCAGGAAC CAGGCAGAGC
AGAGAGAGCT TTCGCTAGAT ATGATTATCT GACAGTGATG AAGAAGTTTA TTCTGATGAT ACATACAGAT TTTCTAGCAT
CTCCAGAAGG CATGGAGCTA ATTGATTTCC TGCCGACACC TTCTGTTGTG CCATCATGGA TAACTGAGGA AGAACTCACG
GTTTTTGCAG ACAAATTCCA AGAATCTGGT TTTACTGGTC CACTCAATTA TTACCGTGCA ATGGACTTAA ACTGGGAGCT
TCTTGCACCA TGGCAAGGAT CAAAGGTAAC AGTTCCAACG AAGTTCATAG CAGGAAACAA AGACATGGCT TTTGATCTTG
AAACATTTGG TACAAAGGCT TTTTTGGAAA GTGGTACTTT CAAGAGTCTT GTTCCCAACC TTGAAGTTGT TATTATAGAC
GGCCACCATT TTATCCATCA AGAAAAAGCC CAACAAATTT CGGACGAAAT CCTTTCCTTC ATCCGTAAAT TCCCCCCCAA
TGCTTCCATA TAACGTTGCC GATTTATGTA CCTTTTATTT TTTGGTGTAT TTTTAGCTAT TTATATTGTT GTTTGTTAAA
AAAAAAACTC CTGGATTTCC ATTGTTAATT ATTTACAATT TTACGTAACT AGAATTGTGG GTTTCTGTAA GAGAAAGGCA
AACGAATCAT CCATTTAAAA AGTCCATAAT TTATAGGAGT AA

>Vigan.01G329900.01
ATGGAGCACT TAGAGTTGGT GAATGAAGTG AAACACCAAA GAATCAAAGC CAACGGGATA TGGTTACATG TGGCAGAGAA
AGGAACAGGC CCACTTGTTC TTCTGCTTCA TGGCTTCCCA GAACTATGGT ATGCCTGGCG CCACCAGATC AATTACTTGG
CCCAACATGG CTATCATGCA GTTGCACCTG ATCTAAGAGG CTATGGTGAC TCCGATTCTC CTATTGAACC TACTTCCTAC
ACTTGTCACC ACGTTGTAGG TGACCTTATA GCTTTGCTTG ACCATTTTGG TGAACAACAG GCATTTGTCG TTGGATCTGA
TTGGGGATCA ACAATTGGAT GGCATCTGAG TCTGTTTAGA CCTGACAGAG TAAAAGGATT TGTTGCTTTG GGTGTTCCTT
TCCACCCAAG ATCACCCACC AGTAAAACGG TTGAAACTAT CAGAAAATTA TTTGGAGATC AGAGTCATGT CTGCCAATTC
CAGGAACCAG GCAGAGCAGA GAGAGCTTTC GCTAGATATG ATTATCTGAC AGTGATGAAG AAGTTTATTC TGATGATACA
TACAGATTTT CTAGCATCTC CAGAAGGCAT GGAGCTAATT GATTTCCTGC CGACACCTTC TGTTGTGCCA TCATGGATAA
CTGAGGAAGA ACTCACGGTT TTTGCAGACA AATTCCAAGA ATCTGGTTTT ACTGGTCCAC TCAATTATTA CCGTGCAATG
GACTTAAACT GGGAGCTTCT TGCACCATGG CAAGGATCAA AGGTAACAGT TCCAACGAAG TTCATAGCAG GAAACAAAGA
CATGGCTTTT GATCTTGAAA CATTTGGTAC AAAGGCTTTT TTGGAAAGTG GTACTTTCAA GAGTCTTGTT CCCAACCTTG
AAGTTGTTAT TATAGACGGC CACCATTTTA TCCATCAAGA AAAAGCCCAA CAAATTTCGG ACGAAATCCT TTCCTTCATC
CGTAAATTCC CCCCCAATGC TTCCATATAA 

>Vigan.01G329900.01
MEHLELVNEV KHQRIKANGI WLHVAEKGTG PLVLLLHGFP ELWYAWRHQI NYLAQHGYHA VAPDLRGYGD SDSPIEPTSY
TCHHVVGDLI ALLDHFGEQQ AFVVGSDWGS TIGWHLSLFR PDRVKGFVAL GVPFHPRSPT SKTVETIRKL FGDQSHVCQF
QEPGRAERAF ARYDYLTVMK KFILMIHTDF LASPEGMELI DFLPTPSVVP SWITEEELTV FADKFQESGF TGPLNYYRAM
DLNWELLAPW QGSKVTVPTK FIAGNKDMAF DLETFGTKAF LESGTFKSLV PNLEVVIIDG HHFIHQEKAQ QISDEILSFI
RKFPPNASI*