GBrowse Details

Vigan.01G321300.01

Basic Information:
Name: Vigan.01G321300.01
Multiple alignment
Variant Information
Position: Chr01:45044495..45047920 (- strand)
Length: 3426
Functional Information:
Description: Similar to Proteasome subunit alpha type. [V7CFY6, Phaseolus vulgaris]
GO: Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511)
Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603)
Cellular Component: proteasome core complex (GO:0005839)
Cellular Component: proteasome core complex, alpha-subunit complex (GO:0019773)
Molecular Function: endopeptidase activity (GO:0004175)
Molecular Function: threonine-type endopeptidase activity (GO:0004298)
InterPro: Proteasome alpha-subunit, N-terminal domain (IPR000426)
Proteasome, subunit alpha/beta (IPR001353)
Proteasome A-type subunit (IPR023332)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:66.88,54.60,84.77,58.24,135.11,175.13,45.62,65.84
Arabidopsis thaliana homolog: AT5G66140.1
Automatic updates:
Name: NM_001278992 NCBI(nuccore)
Organism: Cicer arietinum
Description: Cicer arietinum proteasome subunit alpha type-7-like (PAD1), mRNA.
PubMed ID: 10739099 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:45044495..45045017 (- strand)
Length: 523
Type: three_prime_UTR
Position: Chr01:45045018..45045179 (- strand)
Length: 162
Type: CDS
Position: Chr01:45047097..45047511 (- strand)
Length: 415
Type: CDS
Position: Chr01:45047641..45047813 (- strand)
Length: 173
Type: CDS
Position: Chr01:45047814..45047920 (- strand)
Length: 107
Type: five_prime_UTR

>Vigan.01G321300.01 class=Sequence position=Chr01:45044495..45047920 (- strand)
CTTTACTCTC TTCACCGAAG CAAAAAGCTT GAATAGAGAG GCAAGGAGAG AGCTAGCAAT CCCAACTCAG AAGTAAAACT
TAGTAGCAAA CACAAAAGCA CGGCACAATG GCCAGGTACG ATCGAGCAAT CACCGTGTTC TCCCCCGACG GTCACCTCTT
CCAGGTCGAG TATGCCCTCG AAGCCGTCCG CAAAGGTAAC GCCGCCGTCG GCGTCCGAGG CACAGACAAC GTCGTCCTCG
GCGTCGAGAA GAAATCCACC GCCAAACTCC AAGACTCCAG GTTCCTTTCC AATTCCCCCT TCTTCTTTTT TTCAGATCCC
TTTCCCTTCG ATTAGGGATC ACCGAGACAA CGACGTCGTT TCAAACTAGA CTTGGCTTAC TCCCTGATTG ACTCTGTGTC
GTTTCGCAGG ACTGTAAGGA AGATTGTGAA TCTCGACGAT CACATTGCGC TTGCCTGCGC GGGGCTGAAG GCCGACGCAC
GTGTGCTCAT AAACCGGGCA CGTGTGGAGT GTCAGAGTCA CAGGCTCACC GTCGAGGATC CCGTTACTGT TGAGTATATC
ACCCGTTACA TTGCGGGGCT TCAGCAGAAG TACACGCAGA GTGGTGGTGT GCGACCCTTT GGGCTTTCCA CCCTCATTGT
TGGGTTTGAT CCCTACACTG GCGCCCCCTC ACTGTACCAG ACGGACCCTT CTGGCACGTT TTCCGCGTGG AAGGCCAACG
CCACCGGCCG AAACTCGAAT TCGATTCGGG AGTTTCTGGA GAAGAATTTC AAGGAGACCT CTGGGCAGGA GACTGTGAAA
TTGGCTATTC GTGCATTGCT TGAAGTGAGT TTCATTTTTG CCTTTTGTTT GTGAATGAAT ACCTGCCTGC CTGGTTTTGT
TGTTTATCTA GAAACCCTTG CCTTGCATTT TGCGTGTTCT GCCTTTTAAC GTTTTTTATG GCTTGGGAAG AACGCCAAGG
TAGTTTCTGG TGGGAAGAAG AAATGGATTG GAATGGTCTA CCCTGATGTG TTCTCTTTGG TTCTACCTTT TTAGTGGAAT
CATAACATAC GACTTTATAT CTTTATGTTC AATTCCGTTG TATTTTTTAA AATGTACCGA AATAGCACAA AATCTATATA
CTATGTTCTA TCCTGTTCAA CCCTTTCTAT CAAAAGCTAT CTAATTGTCC TGAGCTTGGT ATGCCTCATA ATATATTGGG
CAGTTGAGTC AAAGTAACAT TTTCACTAGA TTAGACTGGC CTAAAGTACT CAACTTCATA CATAGATCTT GTCTCTCTCT
TTGATTCTTA ATGTAGACCT GGCTTCTTTC TAAAAATCAA TGACTAATAT AGCCATAGGA GTTGTTATGT AACACATATA
TAGCATTATT CTTTTGGAAT ATTTATCGTT GAGTAAGATT AAAAACACGA ATCTCATGCA CTGATTAATG TTTTATAGTT
GTAAACAGAA ACCATGTTTT AGCATGTGAC TCTTTCTTAA CTAAACTTTG TTGATATATG TCTGTAAGCT ATCTGGTACA
TTATTATATA CTTAATGCAA ATAAGCATGT CATTCAACCT CAACTTAAAC CATCAAATTC ATTTTAATTC ACTAAAATAA
CAATTTTGTA GAACTTCATG ATGACTTCTC ACATATCTAA TCTAATAGTT TATATCTTTC ATATTCTTTT TGTATTGATC
TATGCCAATA ACGTTCTGTA ATTGTATTTA GGAATTTAAG CCAAACCAAA ATGAATATAT GAAAAACAAG ACAACTTTGT
GATACACTTA TGTGGTAAAA GCTCTTCGTT TGAAAATTTT AATATAAAAT AAAAGATGAG AGCTAGGTCA GACAGTTGGA
AGGAATGAGG ATATCATTGG TACTTAAGAT GCACTTTTCC TTTCCTCTTA CGAATTTTTT TGCATAGATG CTAGCTAAAT
TCGTCTTTAC TGATAAATAA AATTATTAGG AACTAGGATA TGTCATTTAG ATCATTTCTA GATGATCTAG GATAGTCAGC
AACCTAAAGT GAAGCTTATG TTGCTGTATT TCACAATCCT TGGCACTTAA TTCCCTTATT GTTTTGAGCA GAATTATAAT
TTAGGTATTT CTGGTAAAAT ATTTGTTGTT CGGGAACAAT CAACCAAATA AATGGTTAAC AATGTTGTAA TATTGTTAAT
GGTTTAACCA TATATTTGCT TCAATGAACA CTTAACTAAT TAATTTTACT TAAATTAGAA AAATATTTTT CTGGGAATTT
CCCTGTTTAT GTTTTTTGTA TTTGTTATGC CCTAGGTCCA GAACTCTTAA CTAGTCCTAT TTTTGGTTTG TGTTTTGCAT
ACTTGGGAAA GGGAAATTAT CTTGGGGCAA TATTTTCCCA TTGAAGACTG ACGTTTTCAG TGCTGCAGAC TGGTTCTTTT
GATTTAGTTT TTTTTTTATT ATTGAAGTAA ATGTACATCT ATACATGACT TGTTTGCATT CAAAGCTTTT ATATAAGTTG
TGTCTTTTGC CACTTAAAAT GCAAAATTTT GGGCTGCTTA CATAATGATA TCGACTCTAA TATTGACAGA GCAAGTTGAT
AAATCTGATA GTGGTAAATT GGCCTGTTCA ATCAAACTCT GAAATAGATC GAGTGGTTCT GCCTATTCCA GTTGCATGAT
TACAGTATTA GTGTTATTAC TATCTTTTAA TAGTTATGCA TTCGGAACAT GGTTTTTTGC GCTTCACTTT GTGATTTTTA
TTTGACATCG TATGTGATTA GGTTGTTGAG AGTGGAGGGA AAAATATAGA AGTTGCTGTG ATGACCAAGG AGCATGGTCT
GCGTCAACTG GAGGAAGCTG AAATTGATGC CATCGTTGCT GAGATCGAAG CAGAGAAAGC AGCTGCTGAG GCTGCGAAGA
AAGCCCCTCC GAAGGAGACA TGATTTTCTG TTTAGTGTGT TCCGCAGTGT TCTTGCTAGG TTGTGGCTGT ACTCGCTGGA
GCTAAAATTG ATGGCATTGT GTCTGAGATT GAAACAGAGA AAACGGTTGT TGAGGCTGCA AAGAATACCA TTTCTAGGGA
GAAGACATGA TTTATGTTAC TTTTGTTTAG CACTTGTGGT CTCGATAGAT GTTGGCCTAA CTTAAAATTG AATTCTTTGT
TGTTTTTTGG TACTGCCATA TGACATAGTA TTGGTCAAAT TAATTGCATG CCCTTGTTAT TCAAGTTCAA CTTGAGTCGG
GTGATACTCC ATGATCCACA ACATTTCATA TGCAAGAACT CGTGCTTTAT ACTGGTAAAT ACGACAATAT TTAGGAAATA
TGTGTCCATT GTGTAGAAAA AAGAGAGAGT ATATTTCCAT CTCTATAAGA AAATCTAATG ACGTGAAATT GAAATAATGG
TGTTATTAGA TTGTGGATAA ATCATGTGAA CTGCTATATA ATAAAATGTT GTAATTTCGT GTTTGA

>Vigan.01G321300.01
CTTTACTCTC TTCACCGAAG CAAAAAGCTT GAATAGAGAG GCAAGGAGAG AGCTAGCAAT CCCAACTCAG AAGTAAAACT
TAGTAGCAAA CACAAAAGCA CGGCACAATG GCCAGGTACG ATCGAGCAAT CACCGTGTTC TCCCCCGACG GTCACCTCTT
CCAGGTCGAG TATGCCCTCG AAGCCGTCCG CAAAGGTAAC GCCGCCGTCG GCGTCCGAGG CACAGACAAC GTCGTCCTCG
GCGTCGAGAA GAAATCCACC GCCAAACTCC AAGACTCCAG GACTGTAAGG AAGATTGTGA ATCTCGACGA TCACATTGCG
CTTGCCTGCG CGGGGCTGAA GGCCGACGCA CGTGTGCTCA TAAACCGGGC ACGTGTGGAG TGTCAGAGTC ACAGGCTCAC
CGTCGAGGAT CCCGTTACTG TTGAGTATAT CACCCGTTAC ATTGCGGGGC TTCAGCAGAA GTACACGCAG AGTGGTGGTG
TGCGACCCTT TGGGCTTTCC ACCCTCATTG TTGGGTTTGA TCCCTACACT GGCGCCCCCT CACTGTACCA GACGGACCCT
TCTGGCACGT TTTCCGCGTG GAAGGCCAAC GCCACCGGCC GAAACTCGAA TTCGATTCGG GAGTTTCTGG AGAAGAATTT
CAAGGAGACC TCTGGGCAGG AGACTGTGAA ATTGGCTATT CGTGCATTGC TTGAAGTTGT TGAGAGTGGA GGGAAAAATA
TAGAAGTTGC TGTGATGACC AAGGAGCATG GTCTGCGTCA ACTGGAGGAA GCTGAAATTG ATGCCATCGT TGCTGAGATC
GAAGCAGAGA AAGCAGCTGC TGAGGCTGCG AAGAAAGCCC CTCCGAAGGA GACATGATTT TCTGTTTAGT GTGTTCCGCA
GTGTTCTTGC TAGGTTGTGG CTGTACTCGC TGGAGCTAAA ATTGATGGCA TTGTGTCTGA GATTGAAACA GAGAAAACGG
TTGTTGAGGC TGCAAAGAAT ACCATTTCTA GGGAGAAGAC ATGATTTATG TTACTTTTGT TTAGCACTTG TGGTCTCGAT
AGATGTTGGC CTAACTTAAA ATTGAATTCT TTGTTGTTTT TTGGTACTGC CATATGACAT AGTATTGGTC AAATTAATTG
CATGCCCTTG TTATTCAAGT TCAACTTGAG TCGGGTGATA CTCCATGATC CACAACATTT CATATGCAAG AACTCGTGCT
TTATACTGGT AAATACGACA ATATTTAGGA AATATGTGTC CATTGTGTAG AAAAAAGAGA GAGTATATTT CCATCTCTAT
AAGAAAATCT AATGACGTGA AATTGAAATA ATGGTGTTAT TAGATTGTGG ATAAATCATG TGAACTGCTA TATAATAAAA
TGTTGTAATT TCGTGTTTGA 

>Vigan.01G321300.01
ATGGCCAGGT ACGATCGAGC AATCACCGTG TTCTCCCCCG ACGGTCACCT CTTCCAGGTC GAGTATGCCC TCGAAGCCGT
CCGCAAAGGT AACGCCGCCG TCGGCGTCCG AGGCACAGAC AACGTCGTCC TCGGCGTCGA GAAGAAATCC ACCGCCAAAC
TCCAAGACTC CAGGACTGTA AGGAAGATTG TGAATCTCGA CGATCACATT GCGCTTGCCT GCGCGGGGCT GAAGGCCGAC
GCACGTGTGC TCATAAACCG GGCACGTGTG GAGTGTCAGA GTCACAGGCT CACCGTCGAG GATCCCGTTA CTGTTGAGTA
TATCACCCGT TACATTGCGG GGCTTCAGCA GAAGTACACG CAGAGTGGTG GTGTGCGACC CTTTGGGCTT TCCACCCTCA
TTGTTGGGTT TGATCCCTAC ACTGGCGCCC CCTCACTGTA CCAGACGGAC CCTTCTGGCA CGTTTTCCGC GTGGAAGGCC
AACGCCACCG GCCGAAACTC GAATTCGATT CGGGAGTTTC TGGAGAAGAA TTTCAAGGAG ACCTCTGGGC AGGAGACTGT
GAAATTGGCT ATTCGTGCAT TGCTTGAAGT TGTTGAGAGT GGAGGGAAAA ATATAGAAGT TGCTGTGATG ACCAAGGAGC
ATGGTCTGCG TCAACTGGAG GAAGCTGAAA TTGATGCCAT CGTTGCTGAG ATCGAAGCAG AGAAAGCAGC TGCTGAGGCT
GCGAAGAAAG CCCCTCCGAA GGAGACATGA 

>Vigan.01G321300.01
MARYDRAITV FSPDGHLFQV EYALEAVRKG NAAVGVRGTD NVVLGVEKKS TAKLQDSRTV RKIVNLDDHI ALACAGLKAD
ARVLINRARV ECQSHRLTVE DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY TGAPSLYQTD PSGTFSAWKA
NATGRNSNSI REFLEKNFKE TSGQETVKLA IRALLEVVES GGKNIEVAVM TKEHGLRQLE EAEIDAIVAE IEAEKAAAEA
AKKAPPKET*