GBrowse Details

Vigan.01G296600.01

Basic Information:
Name: Vigan.01G296600.01
Multiple alignment
Variant Information
Position: Chr01:42209130..42214315 (+ strand)
Length: 5186
Functional Information:
Description: Similar to Heat shock factor protein hsf8-related. [Q564C8, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Biological Process: response to heat (GO:0009408)
Cellular Component: nucleus (GO:0005634)
Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
Molecular Function: sequence-specific DNA binding (GO:0043565)
InterPro: Heat shock factor (HSF)-type, DNA-binding (IPR000232)
Winged helix-turn-helix DNA-binding domain (IPR011991)
Heat shock transcription factor, plant (IPR027709)
Heat shock transcription factor family (IPR027725)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:24.34,17.73,2.37,5.51,4.95,2.82,4.79,3.69
Arabidopsis thaliana homolog: AT1G32330.1
Automatic updates:
Name: NM_001249811 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max heat stress transcription factor 33 (HSF-33), mRNA.
PubMed ID: 25416131 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:42209130..42209245 (+ strand)
Length: 116
Type: five_prime_UTR
Position: Chr01:42209246..42209503 (+ strand)
Length: 258
Type: CDS
Position: Chr01:42212829..42214091 (+ strand)
Length: 1263
Type: CDS
Position: Chr01:42214092..42214315 (+ strand)
Length: 224
Type: three_prime_UTR

>Vigan.01G296600.01 class=Sequence position=Chr01:42209130..42214315 (+ strand)
AACTAGGGTT TGAGTTTTTC CTTTTCTCTG TAGAAATCAA GATTACACAT AACAAAACCC AGCATTTTTT TTCGCTTTAA
TTTTGGCTTC AGATTTTTTA TTATCGAAAT TGTGAAATGG AGGGAGCAGG CAGTGGGGGC GGAGAAGTGT CGACGGCGGG
GCCGACACCG ATTCCGAACG CTAACGCGCC GCCGCCTTTC CTGAGCAAGA CGTATGACAT GGTGGACGAC CCTTCGACGG
ACTCAATTGT GTCGTGGAGT CCAATGAACA ACAGCTTCAT TGTTTGGAAC CCTCCGGAGT TCGCCAGAGA CCTTTTGCCC
AAACACTTCA AGCACAATAA CTTCTCCAGC TTCGTTCGCC AGTTAAACAC CTACGTAAGT AAACCCCTTC TGACTTTCGT
TTTCTACACT TGGACCATTG TTTACCGGCA ATTGTCAATT GGATTAACTG TTTCCGAGTG GGAAATGGAG GGTTTTTCTT
GAACTGTTCT TGAACTGTTC TTGAACTGTT CTTGAATTGT TCTTGAATTG TTCTTGAATT GTTCTTTATG TTTACCGTCC
TTGGTTGTCG TTTCAACTGA AGTAGATAGT GGGCCTTGAA GTTGGAATTA TAATGGAGGA AGTAACTGTT ATTTATTTCT
CGGATATGTT GGGTCAATCA CGTAATTAAA TTTATGGGTT GTTTTGTCTG GATGATTATG AAGAGTGAAT GGATTGCGAT
TATTGTTTAT TTGGGATGGA CCACCTGAGG GGAATGTGAG GAAACATATC TTTGCTAGAT AAGTTACATG ATTGCTTGTT
TATTTGTGTG ATGACTCAAG GCATGCTCGT TGATTGGTCT GTCCTCTATT TTGAGGGGAT GCGTCAATGT TCGGTGCAAA
AAACCGAGTG ATTAGATCCG ATGATATGTT ATCATAAATT TGATTGTAGG CTGGTTATAC TATGTTGAAT GTGTAACTTC
ATTTTAAGTA TGAAAAATTA TTTTTTTTAA GTTGAGTTTG TCTATTTTTT TATTGTGGTA AGTTAAGGAT TAGGGTAAAA
AATGACCTGG TGGCTTAGCC GAAGCAGTGA CCATTTTTGA GGAAAATGGA ATTAATAATC TTTGCAACCA CGTTTTGTGT
AGTGCGGTCA CTCCTAGCCT GATTTAACTA CGACTTTTTC CAACTAGTTT ATGAAGTTGA GTTATGCTTA AAATCAACTT
TTAAGATGAT ATCAAAATTT ATCCCAGATC TATTGTTGGG TCATTTGCAT TTTCCGTGCT CCAAGCTGGT AGCCCGAGGA
ATAGATGGTA GCGTTGAAAA GCCCCTTTAG AAGTGATCAA TCCCAGGCAA CTCTAGTTAT GGCATGTTTT GGGGGTTGCA
CTAATTGTAG CTTCAAGGGT GGGGATTTAG TTTTTCATCA ACTAGATATA CTACTTGAAT AGAGTTTATA GAGCATGGGC
GGTCTTCACT TTCCAAGTTG ATTTTGTGGA GTTGAATTAA GACTTAAACT TAAATTCTAG GCCGTCAAAC TTAGTATTTG
TGTTAAATAA TGTTAGCTAG GTGATTTTGA ATGATGAAAG GCCATTTGCC ACACATTCAC CATTCTATTT CAGATCTGTT
GAGCACTTTC TATTAGAATG CAAATTCTAT TAATTACTTC CTCTTCTAGA GATCAATTTA AACTAAACTC TATAGCTATT
TATTGACATT TCTACTCAAG TTAGGAGGTA TTTATCTCCT TGGTTATTTT GGGTGCATTT GATGTCAAAA TCTTCTGGCT
ATTGAGAACA AATTAGCTTG ATTGACTAGA GATATGGTCA AGTTATAATA TATAAGTGGA AGCAATTCTC ATACTTTGTA
AGTTAGTTTT GTAGGTTGAG TTAGGTATCT AAAATGTACC ACAATCTATC CTAAAAAGGT TTGTTGGGTT ATCATATCAC
TTGCTATCAA GTTACTATAA AGTCTCACAT TTGAGATTTC CATTTCTCAA TTTGAATGGG TGTATTGGAG ATCTCACATC
AATTAGAGAT ATGATCAAAT TATGGTATGT AAGTAGGTGC AAACCTCAAA ATTCAAGCCA ATTTTCATAG AGTTGAATCA
GGCCTAAATC CATTTGAGCC TGTTATAGCA AGGTTTGATT GGTCTATCAA GTTCCTATTA GACTACCTCC AAATATCTTG
TCCTACACTG CAGATGTCCC CAATCCTTGA TGTGACTAGT TGTGTCTGAA ATCTTACATC AACTAGAGAT GCTTCTAAAT
TATAATATAT AAGTAAGTAT AAACCTTACC TTGTAAGCTA GTTTTGTAAA GTTGAATTAA ACCAAAATCC ACTTTTTAAA
AAGCTCATTG TCAAAATCTT TTCTAGGATA AAGATGTATA TATTCGGTAA ACTTATACAC TATTGTTTTC TAGTTTTCTA
CACAATACAG CTACTTCCTT CTAAATTTTG TATAACCATA GTTTGTGACA TCTTAACAAC ACGGGATGAA CCATAGTTTT
GGAGCCACGT CAAATGATAA CTGTTAATGA TCATATGTAT AGGCATGTTG GTCCATGTTT GTGTGTCTAA GTTTTCTAAA
CACTTCAAGT TATGTAACTC TTGGGAGTTT AGCTTGTGAA AGCATCACAG CTTTTCTTAA ATTTTTTTTG GCAACCTTGT
TGGTTTGTAT GCTTATATGC AGGAGAAAAG TATCTAAATT CCAAAATCTA GTAGTTGATT GTGAGATTTT GTGGTGTTGT
GCCACTGTGG CTCGTTATGC ATCGCCTTGC ATCACATTTT CATAAGCTTC CATTGCAGAG CCCCAAGCTA GTGATAATCA
TGGCATTACT GTGGTATCAC AGTCACTACT GATGATTCAT GAGCTTCATC TTGGCCCCCT CTGTTTCGAC AGTGCTTCTT
GCTCTAGTTT TCACCTGCTA TTGTTAGGAA ATCATAGTTG TCATTATGTT GTGCATGCTC TTCTTATGGT TTGAATTTCA
CCCTTTACAT GTGTTTATTG TCATTTTCTT GCCACTCTAC AGCAATTCAT GGCATTGTTT GCTCTTGTTT GTAGCAACTC
CTGTCCTGTT CTGTCCCACC TCTGTTCTCA AGGTTTTTTC TGGTGTGTGC AGTTTACAAA GACCTCTGTT TTTTACTCTT
TGATTTTATT ATTGAAAATA TTGCTTTAAA ATTATTTTAT TATTCACTAG AATCGTAGTC TTTTTCTGCT TTTATTACAA
ATTTTGAATT AGATTCATAA TGTTTCCACC GGTGGCTGGG TTAAAGAAAC AAGTAGCATT GGATTATTAT AATATATATC
AAATTTAATG TAATAGAAAT GCATACACAC AAGTTTGGTA GTGCATGTGT TTCGGCTAGT GTGCAATATA TAAATCATAA
ATAATTTATC TTGTATCATA AGTCCTGAGG TAGGCTGCTT TGCTCTGGTG TATGGGATTA ACTACTTTGC CTAGAATCTA
GTTCCCAAGA AGAACCTGTC TCAGGCTATG GAGGAGCCCT TTTCATGCAG ACGTGGGTTA AATGAATAAT TCTGTTTTGT
TGTCCGTTTA ATCTTTTTGC TATATTGTTG CATCTTATCC ATATGTTACC ATTTTTAATT TCCTCCTTCA AGGTTTTCGG
CTGTTAGTGC ATGCCAAATG TTGTGTATAT CAAATAAAAA GTTTTACATT TGGCCTCCTT GTGACCTTAC GTTTCTCACA
ACAATTCATC ATTAAGCAGG GTTTTAGAAA GGTAGACCCG GATCGCTGGG AGTTTGCAAA TGAGGGATTT TTAAGGGGTC
AAAAGCACTT GCTTAAGACC ATATCTCGGC GGAAACCTGC CCATGGTCAT AATCATCAAC AAGCACAACA AGTACACGGA
CAGAATTCAT CGGTTGGGGC TTGTGTAGAA GTTGGGAAGT TTGGACTTGA GGAAGAGGTT GAAATTCTCA AGAGAGATAA
GAATGTGCTC ATGCAAGAGC TTGTGAGATT GAGGCAGCAG CAGCAATCTA CTGATAACCA GCTGCAGACT ATGGTTCAGC
GCCTTCAGGG AATGGAGCAA CGGCAGCAAC AAATGATGTC ATTCCTTGCA AAGGCTGTTC AGAGCCCTGG TTTCTTATCT
CAATTTGTAC AACAGCAAAA TGATAGTAAT AGACGCTTAA CAGAGGCAAA TAAAAAACGT CGACTGAAGC AGGAAGGTAT
TGGTGAAATG GAACATACAG CTGCTTCTGA TGGGCAAATT GTTAAATATC AACCTCTGAT AAATGAAGCA GCAAAAGCAA
TGGTAAGGCA AATAATGAAA TTGGATGCTT CTCGACAAGA ATCTTTCAGT AATAACCCCG ATAATTATTT GATTGGTGAT
CATTCATCAC CATCCAGTGA AATGGACAGG GGAAACTCTT TGAGTCGATC TTCTGGAGTA ACACTTCAAG AGGTCCCTCC
AACTAAGGTG CAGTCTTCTT ATGTTCCATC TGCAGCAAGG ACTCAAGGGC ACGGTCCTTC AACAGGAAAA TCTGAGATTC
TATCTTCTTC CCAAGTTGCA GCCTGTGGAG AAGTTACATA TCCTAATCTA AATGTTTCAG TTGGGGAACC TAATGCACCT
GCTATCCCTG TTACTCAAAC AGATGAAATA ATGCCGGACC TTGCTACAAT ACCAGATATA GTAGCAGGAA ACATTCTCAA
TATTCCTCAA GAAAATTATA TGGCACCAGA AACTGGTGGT GACGGATACA TGGATCCTAC TTCATTTGGG GTGAATATGT
CACTACCCCT TGATTTTGAT AGTATTTCAA CTGAACCAGA CATCGATGAT TTGTTGAACA ATCCTCACTT TTGGGATGAT
ATTGTGCGAA CTCCGGTGTC AGAGGATATT GAAACGAATG GTACTGAAGT ATTCTATGAG AATGAGTTGC AGCCAACTGA
AAATGGATGG GAAAAATCTC AACATATGGA CCTACTTACT GAACAGATGG GCTTACTTTC TTCTGATGCA AAAAAAAACT
GAATGTCTTA TGAAAATGTA CATTAATAAT TCATATTGTT CAAGGTAACC TTATCCCCAA CAATGAGTGA TGTTCTTTTA
GTACTAATTA CACCTGCAAG TGCTCACTCA GAACTAACAT GGATTTTGTT TAGTCTGGCT TAGTTTGTGC ATATCAGACC
AAAATTGTCT TGTTGTAGAC TAATATTGAT TTTTTACTTA TATTTTATGA AATATTAATT GTGAAC

>Vigan.01G296600.01
AACTAGGGTT TGAGTTTTTC CTTTTCTCTG TAGAAATCAA GATTACACAT AACAAAACCC AGCATTTTTT TTCGCTTTAA
TTTTGGCTTC AGATTTTTTA TTATCGAAAT TGTGAAATGG AGGGAGCAGG CAGTGGGGGC GGAGAAGTGT CGACGGCGGG
GCCGACACCG ATTCCGAACG CTAACGCGCC GCCGCCTTTC CTGAGCAAGA CGTATGACAT GGTGGACGAC CCTTCGACGG
ACTCAATTGT GTCGTGGAGT CCAATGAACA ACAGCTTCAT TGTTTGGAAC CCTCCGGAGT TCGCCAGAGA CCTTTTGCCC
AAACACTTCA AGCACAATAA CTTCTCCAGC TTCGTTCGCC AGTTAAACAC CTACGGTTTT AGAAAGGTAG ACCCGGATCG
CTGGGAGTTT GCAAATGAGG GATTTTTAAG GGGTCAAAAG CACTTGCTTA AGACCATATC TCGGCGGAAA CCTGCCCATG
GTCATAATCA TCAACAAGCA CAACAAGTAC ACGGACAGAA TTCATCGGTT GGGGCTTGTG TAGAAGTTGG GAAGTTTGGA
CTTGAGGAAG AGGTTGAAAT TCTCAAGAGA GATAAGAATG TGCTCATGCA AGAGCTTGTG AGATTGAGGC AGCAGCAGCA
ATCTACTGAT AACCAGCTGC AGACTATGGT TCAGCGCCTT CAGGGAATGG AGCAACGGCA GCAACAAATG ATGTCATTCC
TTGCAAAGGC TGTTCAGAGC CCTGGTTTCT TATCTCAATT TGTACAACAG CAAAATGATA GTAATAGACG CTTAACAGAG
GCAAATAAAA AACGTCGACT GAAGCAGGAA GGTATTGGTG AAATGGAACA TACAGCTGCT TCTGATGGGC AAATTGTTAA
ATATCAACCT CTGATAAATG AAGCAGCAAA AGCAATGGTA AGGCAAATAA TGAAATTGGA TGCTTCTCGA CAAGAATCTT
TCAGTAATAA CCCCGATAAT TATTTGATTG GTGATCATTC ATCACCATCC AGTGAAATGG ACAGGGGAAA CTCTTTGAGT
CGATCTTCTG GAGTAACACT TCAAGAGGTC CCTCCAACTA AGGTGCAGTC TTCTTATGTT CCATCTGCAG CAAGGACTCA
AGGGCACGGT CCTTCAACAG GAAAATCTGA GATTCTATCT TCTTCCCAAG TTGCAGCCTG TGGAGAAGTT ACATATCCTA
ATCTAAATGT TTCAGTTGGG GAACCTAATG CACCTGCTAT CCCTGTTACT CAAACAGATG AAATAATGCC GGACCTTGCT
ACAATACCAG ATATAGTAGC AGGAAACATT CTCAATATTC CTCAAGAAAA TTATATGGCA CCAGAAACTG GTGGTGACGG
ATACATGGAT CCTACTTCAT TTGGGGTGAA TATGTCACTA CCCCTTGATT TTGATAGTAT TTCAACTGAA CCAGACATCG
ATGATTTGTT GAACAATCCT CACTTTTGGG ATGATATTGT GCGAACTCCG GTGTCAGAGG ATATTGAAAC GAATGGTACT
GAAGTATTCT ATGAGAATGA GTTGCAGCCA ACTGAAAATG GATGGGAAAA ATCTCAACAT ATGGACCTAC TTACTGAACA
GATGGGCTTA CTTTCTTCTG ATGCAAAAAA AAACTGAATG TCTTATGAAA ATGTACATTA ATAATTCATA TTGTTCAAGG
TAACCTTATC CCCAACAATG AGTGATGTTC TTTTAGTACT AATTACACCT GCAAGTGCTC ACTCAGAACT AACATGGATT
TTGTTTAGTC TGGCTTAGTT TGTGCATATC AGACCAAAAT TGTCTTGTTG TAGACTAATA TTGATTTTTT ACTTATATTT
TATGAAATAT TAATTGTGAA C

>Vigan.01G296600.01
ATGGAGGGAG CAGGCAGTGG GGGCGGAGAA GTGTCGACGG CGGGGCCGAC ACCGATTCCG AACGCTAACG CGCCGCCGCC
TTTCCTGAGC AAGACGTATG ACATGGTGGA CGACCCTTCG ACGGACTCAA TTGTGTCGTG GAGTCCAATG AACAACAGCT
TCATTGTTTG GAACCCTCCG GAGTTCGCCA GAGACCTTTT GCCCAAACAC TTCAAGCACA ATAACTTCTC CAGCTTCGTT
CGCCAGTTAA ACACCTACGG TTTTAGAAAG GTAGACCCGG ATCGCTGGGA GTTTGCAAAT GAGGGATTTT TAAGGGGTCA
AAAGCACTTG CTTAAGACCA TATCTCGGCG GAAACCTGCC CATGGTCATA ATCATCAACA AGCACAACAA GTACACGGAC
AGAATTCATC GGTTGGGGCT TGTGTAGAAG TTGGGAAGTT TGGACTTGAG GAAGAGGTTG AAATTCTCAA GAGAGATAAG
AATGTGCTCA TGCAAGAGCT TGTGAGATTG AGGCAGCAGC AGCAATCTAC TGATAACCAG CTGCAGACTA TGGTTCAGCG
CCTTCAGGGA ATGGAGCAAC GGCAGCAACA AATGATGTCA TTCCTTGCAA AGGCTGTTCA GAGCCCTGGT TTCTTATCTC
AATTTGTACA ACAGCAAAAT GATAGTAATA GACGCTTAAC AGAGGCAAAT AAAAAACGTC GACTGAAGCA GGAAGGTATT
GGTGAAATGG AACATACAGC TGCTTCTGAT GGGCAAATTG TTAAATATCA ACCTCTGATA AATGAAGCAG CAAAAGCAAT
GGTAAGGCAA ATAATGAAAT TGGATGCTTC TCGACAAGAA TCTTTCAGTA ATAACCCCGA TAATTATTTG ATTGGTGATC
ATTCATCACC ATCCAGTGAA ATGGACAGGG GAAACTCTTT GAGTCGATCT TCTGGAGTAA CACTTCAAGA GGTCCCTCCA
ACTAAGGTGC AGTCTTCTTA TGTTCCATCT GCAGCAAGGA CTCAAGGGCA CGGTCCTTCA ACAGGAAAAT CTGAGATTCT
ATCTTCTTCC CAAGTTGCAG CCTGTGGAGA AGTTACATAT CCTAATCTAA ATGTTTCAGT TGGGGAACCT AATGCACCTG
CTATCCCTGT TACTCAAACA GATGAAATAA TGCCGGACCT TGCTACAATA CCAGATATAG TAGCAGGAAA CATTCTCAAT
ATTCCTCAAG AAAATTATAT GGCACCAGAA ACTGGTGGTG ACGGATACAT GGATCCTACT TCATTTGGGG TGAATATGTC
ACTACCCCTT GATTTTGATA GTATTTCAAC TGAACCAGAC ATCGATGATT TGTTGAACAA TCCTCACTTT TGGGATGATA
TTGTGCGAAC TCCGGTGTCA GAGGATATTG AAACGAATGG TACTGAAGTA TTCTATGAGA ATGAGTTGCA GCCAACTGAA
AATGGATGGG AAAAATCTCA ACATATGGAC CTACTTACTG AACAGATGGG CTTACTTTCT TCTGATGCAA AAAAAAACTG
A

>Vigan.01G296600.01
MEGAGSGGGE VSTAGPTPIP NANAPPPFLS KTYDMVDDPS TDSIVSWSPM NNSFIVWNPP EFARDLLPKH FKHNNFSSFV
RQLNTYGFRK VDPDRWEFAN EGFLRGQKHL LKTISRRKPA HGHNHQQAQQ VHGQNSSVGA CVEVGKFGLE EEVEILKRDK
NVLMQELVRL RQQQQSTDNQ LQTMVQRLQG MEQRQQQMMS FLAKAVQSPG FLSQFVQQQN DSNRRLTEAN KKRRLKQEGI
GEMEHTAASD GQIVKYQPLI NEAAKAMVRQ IMKLDASRQE SFSNNPDNYL IGDHSSPSSE MDRGNSLSRS SGVTLQEVPP
TKVQSSYVPS AARTQGHGPS TGKSEILSSS QVAACGEVTY PNLNVSVGEP NAPAIPVTQT DEIMPDLATI PDIVAGNILN
IPQENYMAPE TGGDGYMDPT SFGVNMSLPL DFDSISTEPD IDDLLNNPHF WDDIVRTPVS EDIETNGTEV FYENELQPTE
NGWEKSQHMD LLTEQMGLLS SDAKKN*