GBrowse Details

Vigan.01G260700.01

Basic Information:
Name: Vigan.01G260700.01
Multiple alignment
Variant Information
Position: Chr01:37057024..37059335 (- strand)
Length: 2312
Functional Information:
Description: Similar to uncharacterized protein. [B9G464, Oryza sativa subsp. japonica]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:5.90,7.01,4.12,2.08,12.62,9.23,10.73,3.19
Arabidopsis thaliana homolog: AT2G04340.1
Automatic updates:
Name: NM_001369193 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527894 (LOC100527894), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:37057024..37057391 (- strand)
Length: 368
Type: three_prime_UTR
Position: Chr01:37057392..37057475 (- strand)
Length: 84
Type: CDS
Position: Chr01:37058718..37058906 (- strand)
Length: 189
Type: CDS
Position: Chr01:37059041..37059271 (- strand)
Length: 231
Type: CDS
Position: Chr01:37059272..37059335 (- strand)
Length: 64
Type: five_prime_UTR

>Vigan.01G260700.01 class=Sequence position=Chr01:37057024..37059335 (- strand)
TGAAGACATG ATGAATCGGC ACAGAGGGAT CCCCTTCCTT GTGTTGGATG AAAGGTAACC AAGGATGAAC GCATTGAAGT
GTAGATTATT GCACACTCTT CGTGGTGATG TGCCCACAGA AGCATTGAAG AGAAGAGCGT TGGAATTGGA GAAGAAAAGG
AAGATGAGGC AACCCAAGAG CAAGGACCAG TTTATCGTTA CAGTTCCCGA ATCCCTGTCT TACCTCGACA CCGCCACCAT
TCCCATGGTC GTCGCCGCCG TCGGAATCGC TCTACTCGCC AAACTCCTCA TGATGGTACG TATGTCACCT CCCAACTCCA
CAATATAAAC TAACAAGTAT ATCAATGTGA GGGTTACGGT GATTGATCTT GATGCACATC ACGTGTTCGA TGAAATGACG
TTCTGACTAA TGGATGTAAT CGATGACAGT ATGATGAATC TAAGTCCCAA GAGCTGTTGG AGCGTAAAAT AAAGAATGCT
CCTGAAGGTC AAGGCACCGT TAGAATGGTA ACCCGAGAGG AGTGGGAGAA GTTCCGAGAA ATCAGGCCCA GAACCCCGTT
TGAGTCCACT TTTTCGCGCC CTAATTCCAG AATAAGAACC GGAGAACCAT TGCGCATGGT AATCACTCTC ACCTTACATA
TTCTTTACTT TCTTTATATG TGTGTAGGCT GTCCATTCGA TGAGAATATG CTTTCTCGAA AAAAACTGAT CTTGAATAGA
TAGCTATATA ACTATGGTTG AAATTAACTT CTCTAGACTT TTGGTAGATT GGTCTACATA ATCTATGAAA TATCCTTCAT
CGCACATGAT TTAGGCATTT GTTGATGGGC ATTTTCAATG CAAAAATTGA AAACTTAGAG TGTGTTTGCA AAACTATTCA
ACTTCCGAAT CCAACAATTT CTCCCATACA TGTTTAGTTT CTTGAAAAAG AGAGATATGC GTGCTGAAAA TCTTTTTGTT
TTTGTGTTTT CAACACTGAA TTCTCATTTT CTAAGAAACT AAACATGGCA AAGGGTTTTT CTCCGGTAGG GAGGAAGGAA
AAGAAAAGAG AGAGGTCGTT AATTTTGTTG GTTTGTTTGG TAGAGTTTCA CCTTAGTAAT ATGCAATGCA TTCAATAAAA
TGCAAATTAC CATAGTAAAT TGGAAAACAT ACGGTACCTG TAATATTGTT GGACTGACTC TACTTTTTCT TATTTATCTC
CTTATCTCCC TATTTATTAT CAAATTACAC AATTTTGAAA ACATTTTCTG TATATATTTC AGCTATTTCT TTTCTCAACC
AAACAACTAA ACATTCAGTT TTATTTCTCA GCTTATTTCC TCTATTTTTT TTCAGAACTA AACAGATCAT AAGAGAAATT
GTTGGATTCG CATTCAATGG AGGTTGAATG GTTTTGAAAA CACACTCTTA CAATTTTCAT TCGAATGGTG GAATTGAACC
TGAGTTTTTA AGTTGGTTTT AGTAGTAGTA AGATTTTTCT TTTTAGTAAG TCCTCTTATA TCTCTCTACT CATGATATAT
TTTCATTTTG ACTTGAAAAA TTGTTTTTTT AATGCTAAGT AATGTTGTTA GTTGTATTGG AGTTTACATA CGCAATGTCT
TTAAGAACTC ATTTGTTCTA ATGATATTTT AAAGTTGCTT AACTTTAAGA ATCAGCACAA GTACTTGCAT TGGAGTTAGG
AAACATTTAA ATTTACAATG TGTTTAGATA GCACAAAAAT CAACTCTATC CTATCGTCCT GAAAGAGAGA AGTATTTGTT
GTCTTACCTT CCTTCACCAT GCAAAATTAA TTGATAATTT CTCACCATGA ACCTAATCCA AACACCCTGA GTGACTGAAA
TTTTCACATG CTGTGCACAG GAGGATGTAA AGGATTGGAC AACTGATGTT CTCATGGATG CTCTTCACAG AGTAGAAGAC
TATGCTAAGC ATGGTTCTAA GTAATGTAAC TAGTCCTCCT ATTAACCTCA AATTACCCTT TGCTTTTTAA TTTTAATGCT
TAGTATAAAA ATTTCCAGTA CTATTTGTTG TCTTGATCTC AGCGATGAGA TGGCATCGAA TAATTTTGCA ACTGTTACCC
ATATCTTCAC CAAGGAAAAT TGCTCTTTTT AGGCAAACAT GAATTACAGA ATGGCTCATA TTTTGTTGTA TCTTTGGCTG
AACATGTTTT ATGTACCAAA AATATACAAG ATAATTGCTG TATACGCTCA TCATAGCAGA AACTTTGATC CGAAAAGTAC
CTAAACATGT AGTTGTAGAT ACCGGTCTCA TTCAGAAATA ATGTATTACT TGGTTGTTTT TGTATATTAC TG

>Vigan.01G260700.01
TGAAGACATG ATGAATCGGC ACAGAGGGAT CCCCTTCCTT GTGTTGGATG AAAGGTAACC AAGGATGAAC GCATTGAAGT
GTAGATTATT GCACACTCTT CGTGGTGATG TGCCCACAGA AGCATTGAAG AGAAGAGCGT TGGAATTGGA GAAGAAAAGG
AAGATGAGGC AACCCAAGAG CAAGGACCAG TTTATCGTTA CAGTTCCCGA ATCCCTGTCT TACCTCGACA CCGCCACCAT
TCCCATGGTC GTCGCCGCCG TCGGAATCGC TCTACTCGCC AAACTCCTCA TGATGTATGA TGAATCTAAG TCCCAAGAGC
TGTTGGAGCG TAAAATAAAG AATGCTCCTG AAGGTCAAGG CACCGTTAGA ATGGTAACCC GAGAGGAGTG GGAGAAGTTC
CGAGAAATCA GGCCCAGAAC CCCGTTTGAG TCCACTTTTT CGCGCCCTAA TTCCAGAATA AGAACCGGAG AACCATTGCG
CATGGAGGAT GTAAAGGATT GGACAACTGA TGTTCTCATG GATGCTCTTC ACAGAGTAGA AGACTATGCT AAGCATGGTT
CTAAGTAATG TAACTAGTCC TCCTATTAAC CTCAAATTAC CCTTTGCTTT TTAATTTTAA TGCTTAGTAT AAAAATTTCC
AGTACTATTT GTTGTCTTGA TCTCAGCGAT GAGATGGCAT CGAATAATTT TGCAACTGTT ACCCATATCT TCACCAAGGA
AAATTGCTCT TTTTAGGCAA ACATGAATTA CAGAATGGCT CATATTTTGT TGTATCTTTG GCTGAACATG TTTTATGTAC
CAAAAATATA CAAGATAATT GCTGTATACG CTCATCATAG CAGAAACTTT GATCCGAAAA GTACCTAAAC ATGTAGTTGT
AGATACCGGT CTCATTCAGA AATAATGTAT TACTTGGTTG TTTTTGTATA TTACTG

>Vigan.01G260700.01
ATGAACGCAT TGAAGTGTAG ATTATTGCAC ACTCTTCGTG GTGATGTGCC CACAGAAGCA TTGAAGAGAA GAGCGTTGGA
ATTGGAGAAG AAAAGGAAGA TGAGGCAACC CAAGAGCAAG GACCAGTTTA TCGTTACAGT TCCCGAATCC CTGTCTTACC
TCGACACCGC CACCATTCCC ATGGTCGTCG CCGCCGTCGG AATCGCTCTA CTCGCCAAAC TCCTCATGAT GTATGATGAA
TCTAAGTCCC AAGAGCTGTT GGAGCGTAAA ATAAAGAATG CTCCTGAAGG TCAAGGCACC GTTAGAATGG TAACCCGAGA
GGAGTGGGAG AAGTTCCGAG AAATCAGGCC CAGAACCCCG TTTGAGTCCA CTTTTTCGCG CCCTAATTCC AGAATAAGAA
CCGGAGAACC ATTGCGCATG GAGGATGTAA AGGATTGGAC AACTGATGTT CTCATGGATG CTCTTCACAG AGTAGAAGAC
TATGCTAAGC ATGGTTCTAA GTAA

>Vigan.01G260700.01
MNALKCRLLH TLRGDVPTEA LKRRALELEK KRKMRQPKSK DQFIVTVPES LSYLDTATIP MVVAAVGIAL LAKLLMMYDE
SKSQELLERK IKNAPEGQGT VRMVTREEWE KFREIRPRTP FESTFSRPNS RIRTGEPLRM EDVKDWTTDV LMDALHRVED
YAKHGSK*