GBrowse Details

Vigan.01G226600.01

Basic Information:
Name: Vigan.01G226600.01
Multiple alignment
Variant Information
Position: Chr01:30135058..30137873 (+ strand)
Length: 2816
Functional Information:
Description: Similar to VDAC1.3. [Q6W2J3, Lotus japonicus]
GO: Biological Process: anion transport (GO:0006820)
Biological Process: regulation of anion transport (GO:0044070)
Biological Process: transmembrane transport (GO:0055085)
Cellular Component: mitochondrial outer membrane (GO:0005741)
Molecular Function: voltage-gated anion channel activity (GO:0008308)
InterPro: Porin, eukaryotic type (IPR001925)
Porin domain (IPR023614)
Eukaryotic porin/Tom40 (IPR027246)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:126.60,65.00,130.82,82.29,123.17,320.12,92.08,72.25
Automatic updates:
Name: BT095468 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-19M8 unknown mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001254125 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max mitochondrial outer membrane protein porin of 36 kDa-like (LOC100805016), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:30135058..30135321 (+ strand)
Length: 264
Type: five_prime_UTR
Position: Chr01:30135322..30135370 (+ strand)
Length: 49
Type: CDS
Position: Chr01:30135498..30135565 (+ strand)
Length: 68
Type: CDS
Position: Chr01:30135897..30136007 (+ strand)
Length: 111
Type: CDS
Position: Chr01:30136325..30136411 (+ strand)
Length: 87
Type: CDS
Position: Chr01:30136558..30136766 (+ strand)
Length: 209
Type: CDS
Position: Chr01:30136872..30137178 (+ strand)
Length: 307
Type: CDS
Position: Chr01:30137179..30137873 (+ strand)
Length: 695
Type: three_prime_UTR

>Vigan.01G226600.01 class=Sequence position=Chr01:30135058..30137873 (+ strand)
GTAGTTTACA CGTAGTACAA GCTGAACAAC TCACGAATTG ACACCAGAAA AAAGAATCAC GAATATGCTC CCAGCTCAAC
TCTTGTCCCG ATTCTCGTGG CAACTCTTCC TCTTCTTCTA AATCAACGAT CACCGTTTCA TCTTCCCATC CAACGGTTCT
CCTTCATTCT CTCCCTCCCC AATATTAGGG TTTCGTTTTC TTCATCTTCG GACACTTCCC ACATTTTCTC CTCTTCTCCC
TCCTTCAGTT TTCTCGCAAA AATCATGGTG AAAGGTCCAG GTCTCTACAC TGACATCGGC AAGAGAGCTC GAGGTAGCTG
GTTTTTCCTT TCAAACCATT CAGTGAATTC AGTTTTCATT TATCTCTCTC TCCCTTTTTC CCCCATTTTC ATGCACTAAT
CTGCGTGAAT ATCTCACTTA TACTGATGAT TGCTACTCAG ATCTTCTGTT CAAGGATTAT CAGAATGACC ACAAGTTCAC
CATCACCACT CACACTTCTA CTGGAGTGGT AATAATTGTT TGTCTTTGTG TAGTGATTTT ATTGTTTAAA CTTGATGGAA
AACGTATTGT TTTTGTTTTC GTATATTGGT TACTCTTTAA GTTTCATTGC TTTTTCTACA TTTTCATTGG AACCTTGTCT
TGTTGGAGTT AGAAGTTTTG CATGTTGTTC TGTCTGATTA TTTTGCAATA ATTGGCAGTA ATTTGAAAAT GATTCAAGAA
ACTAGAGAAG CCTTTTCATT TGAGATTATG TTTTGTTAGC TTGAAATCTG GATTTAATAC TCTGTTGTAA TAGCTTAGGT
CTCGTTGCAC TGACTATTTC GCTGGCTTTA TGTGTTCAGG AAATTACTTC AACTGGAGTC AGGAAGGGTG AGTTATATTT
GGCCGATATC AGCACTAAGC TGAAGAACAA GAACATCACA TCTGATATCA AAGTGGACAC TAACTCAAGT GTAAGTTGAA
ATTTATTGGT GAAGTAGATT TGAATTAGAA AACTAGCCAT TTCTTTCAGA CCTGTTGGAT GTAATAAAAA GGTTTTTTAA
TTGTAGATGG ACAATATTTT TGCCTTGTGA TTAATAACCG GTTATTCGCT TTATTTATTG TATTATGGGT TTGCAGATTT
GTTATTTGCG TAGTTTGTAT TACTGTGCTT GATCACTTTA CAATTGAATT GACTATTGTA CACTCAGAGT GTCATGAAAA
AAAAAATCCG ATGAGTAGCT GGTTAGAGAC ATATGATACA TTGCTCATCT GACTGAATAC TTTTCAGCTA CGTACAACCA
TTACCGTGGA TGAACCCGCT CCTGGACTCA AGGCAATTTT TAGCTTTATT TTTCCAGATC AGAAATCTGG CAAGGTAAAA
GGCATTTTCC TTTGCTCTAT CTTGCGAAGT ATTTATGCAA TATGGGTTTC TGTTTTCTTA AATTCACTTA ATGCAGGCAA
TAATAATATT TCTAGTTATC CTGGATAATG ATATCTGCTG AATTGTCCAT GGTTTAACAG GTGGAACTCC AGTACCTGCA
CGAGTATGCT GGAATCAGCA CCAGCATTGG ATTGACAGCA AATCCCATTG TTAACTTCTC TGGTGTGGTT GGAAATAATT
TGGTCGCTGT GGGGACAGAT CTTTCATTTG ATACTGCGTC CGGCAACTTT ACTAAATACA ATGCTGGGCT GAATATTACA
CATGCTGACC TCATTGCATC TCTAACTCTG TAAGGATCTA ATCCCAAGGC CACCAATTTT AGAGAGGGTT ATCGATATAT
TGTTTTCATC TTGAATTGAT CTGATGATTC ATCTGTTCCT TTTTCTTAAT ATAGAAATGA TAAAGGTGAT ACCCTCAATG
CCTCATATTA CCACATTGTA AGCCCGTTGA CTAACACTGC CGTTGGCGCG GAGCTTTCAC ATAACTTTTC CAGCAATGAG
AATTCACTCA CCATTGGTAC ACAACATGCT CTGGACCCGT TAACGCACTT GAAAGCTCGG GTGAACAACT ATGGTCTGGC
AAGTGCTCTG ATTCAGCATG ACTGGAATCC AAAAACTCGT TTCTCTCTTG TTGGGGAGGT GGATACTGGG GCCATCGGAA
AGAGTGCAAA GGTTGGTCTT GCTGTGGCCT TGAAACCTTA GATTTAGGTT TCACTTGTGG AGGTAATAAG TAATTGTAGG
GTTTCGATTT CCGAATGAAC CTTTGGTCCT TCATTCTGGA GCTATATCAA TTTCTTGATA TATTGGTGGG CTCGAGTGTA
CAATCAATAA GCACAAACAA AACTTCAATT TGTACTTAAC AGATCCACTC GAATTTTATT GATTTGGGGG CACCTTTGCG
TAAGTTTTTT CGGCATGGAA GGTGATTAAT TTCAATATAA TTTGGGGTGT ACATCAAAGG TTTGATTAGA TGGCTGGCGC
GTGTTTGGTA ATATTTAGTT TTCTTGGTTT TATATTTGAA ATCATCCAGA TTTTTAATGT ATCTATTAAG ATGCTCATTA
CACAAAACGA CCCGAATGAG AAACCGATTT AGACAAGGAT TAATTAAAAT TTATTCCAAC TAGTTAAAGT CTTTAAAGAG
ATCTGAAGTT TGATTTTCTC CAACCTTTTA AGGGGGAAGA TGTACTAAAT CGAGCAAGAG AGCCTCTCAT CTGTTGGAGT
TGTGTGATGG TCTCGCGTCT ATTAATTTTC TGTCCGGATT TGTTCCAGGA AACCTATATT GAAAACTAAC CAGAGAATCT
AAATTCTAAT TACAGTCTTT AAACTACTAG TTCATCGAGT GGCTATTTCT TTCTCTAAAG ACTTAATAAC TAAACTTTAC
AGACTTTGTA AATTTG

>Vigan.01G226600.01
GTAGTTTACA CGTAGTACAA GCTGAACAAC TCACGAATTG ACACCAGAAA AAAGAATCAC GAATATGCTC CCAGCTCAAC
TCTTGTCCCG ATTCTCGTGG CAACTCTTCC TCTTCTTCTA AATCAACGAT CACCGTTTCA TCTTCCCATC CAACGGTTCT
CCTTCATTCT CTCCCTCCCC AATATTAGGG TTTCGTTTTC TTCATCTTCG GACACTTCCC ACATTTTCTC CTCTTCTCCC
TCCTTCAGTT TTCTCGCAAA AATCATGGTG AAAGGTCCAG GTCTCTACAC TGACATCGGC AAGAGAGCTC GAGATCTTCT
GTTCAAGGAT TATCAGAATG ACCACAAGTT CACCATCACC ACTCACACTT CTACTGGAGT GGAAATTACT TCAACTGGAG
TCAGGAAGGG TGAGTTATAT TTGGCCGATA TCAGCACTAA GCTGAAGAAC AAGAACATCA CATCTGATAT CAAAGTGGAC
ACTAACTCAA GTCTACGTAC AACCATTACC GTGGATGAAC CCGCTCCTGG ACTCAAGGCA ATTTTTAGCT TTATTTTTCC
AGATCAGAAA TCTGGCAAGG TGGAACTCCA GTACCTGCAC GAGTATGCTG GAATCAGCAC CAGCATTGGA TTGACAGCAA
ATCCCATTGT TAACTTCTCT GGTGTGGTTG GAAATAATTT GGTCGCTGTG GGGACAGATC TTTCATTTGA TACTGCGTCC
GGCAACTTTA CTAAATACAA TGCTGGGCTG AATATTACAC ATGCTGACCT CATTGCATCT CTAACTCTAA ATGATAAAGG
TGATACCCTC AATGCCTCAT ATTACCACAT TGTAAGCCCG TTGACTAACA CTGCCGTTGG CGCGGAGCTT TCACATAACT
TTTCCAGCAA TGAGAATTCA CTCACCATTG GTACACAACA TGCTCTGGAC CCGTTAACGC ACTTGAAAGC TCGGGTGAAC
AACTATGGTC TGGCAAGTGC TCTGATTCAG CATGACTGGA ATCCAAAAAC TCGTTTCTCT CTTGTTGGGG AGGTGGATAC
TGGGGCCATC GGAAAGAGTG CAAAGGTTGG TCTTGCTGTG GCCTTGAAAC CTTAGATTTA GGTTTCACTT GTGGAGGTAA
TAAGTAATTG TAGGGTTTCG ATTTCCGAAT GAACCTTTGG TCCTTCATTC TGGAGCTATA TCAATTTCTT GATATATTGG
TGGGCTCGAG TGTACAATCA ATAAGCACAA ACAAAACTTC AATTTGTACT TAACAGATCC ACTCGAATTT TATTGATTTG
GGGGCACCTT TGCGTAAGTT TTTTCGGCAT GGAAGGTGAT TAATTTCAAT ATAATTTGGG GTGTACATCA AAGGTTTGAT
TAGATGGCTG GCGCGTGTTT GGTAATATTT AGTTTTCTTG GTTTTATATT TGAAATCATC CAGATTTTTA ATGTATCTAT
TAAGATGCTC ATTACACAAA ACGACCCGAA TGAGAAACCG ATTTAGACAA GGATTAATTA AAATTTATTC CAACTAGTTA
AAGTCTTTAA AGAGATCTGA AGTTTGATTT TCTCCAACCT TTTAAGGGGG AAGATGTACT AAATCGAGCA AGAGAGCCTC
TCATCTGTTG GAGTTGTGTG ATGGTCTCGC GTCTATTAAT TTTCTGTCCG GATTTGTTCC AGGAAACCTA TATTGAAAAC
TAACCAGAGA ATCTAAATTC TAATTACAGT CTTTAAACTA CTAGTTCATC GAGTGGCTAT TTCTTTCTCT AAAGACTTAA
TAACTAAACT TTACAGACTT TGTAAATTTG 

>Vigan.01G226600.01
ATGGTGAAAG GTCCAGGTCT CTACACTGAC ATCGGCAAGA GAGCTCGAGA TCTTCTGTTC AAGGATTATC AGAATGACCA
CAAGTTCACC ATCACCACTC ACACTTCTAC TGGAGTGGAA ATTACTTCAA CTGGAGTCAG GAAGGGTGAG TTATATTTGG
CCGATATCAG CACTAAGCTG AAGAACAAGA ACATCACATC TGATATCAAA GTGGACACTA ACTCAAGTCT ACGTACAACC
ATTACCGTGG ATGAACCCGC TCCTGGACTC AAGGCAATTT TTAGCTTTAT TTTTCCAGAT CAGAAATCTG GCAAGGTGGA
ACTCCAGTAC CTGCACGAGT ATGCTGGAAT CAGCACCAGC ATTGGATTGA CAGCAAATCC CATTGTTAAC TTCTCTGGTG
TGGTTGGAAA TAATTTGGTC GCTGTGGGGA CAGATCTTTC ATTTGATACT GCGTCCGGCA ACTTTACTAA ATACAATGCT
GGGCTGAATA TTACACATGC TGACCTCATT GCATCTCTAA CTCTAAATGA TAAAGGTGAT ACCCTCAATG CCTCATATTA
CCACATTGTA AGCCCGTTGA CTAACACTGC CGTTGGCGCG GAGCTTTCAC ATAACTTTTC CAGCAATGAG AATTCACTCA
CCATTGGTAC ACAACATGCT CTGGACCCGT TAACGCACTT GAAAGCTCGG GTGAACAACT ATGGTCTGGC AAGTGCTCTG
ATTCAGCATG ACTGGAATCC AAAAACTCGT TTCTCTCTTG TTGGGGAGGT GGATACTGGG GCCATCGGAA AGAGTGCAAA
GGTTGGTCTT GCTGTGGCCT TGAAACCTTA G

>Vigan.01G226600.01
MVKGPGLYTD IGKRARDLLF KDYQNDHKFT ITTHTSTGVE ITSTGVRKGE LYLADISTKL KNKNITSDIK VDTNSSLRTT
ITVDEPAPGL KAIFSFIFPD QKSGKVELQY LHEYAGISTS IGLTANPIVN FSGVVGNNLV AVGTDLSFDT ASGNFTKYNA
GLNITHADLI ASLTLNDKGD TLNASYYHIV SPLTNTAVGA ELSHNFSSNE NSLTIGTQHA LDPLTHLKAR VNNYGLASAL
IQHDWNPKTR FSLVGEVDTG AIGKSAKVGL AVALKP*