GBrowse Details

Vigan.01G222300.01

Basic Information:
Name: Vigan.01G222300.01
Multiple alignment
Variant Information
Position: Chr01:29397105..29399508 (+ strand)
Length: 2404
Functional Information:
Description: Similar to Uncharacterized protein. [I1JE29, Glycine max]
InterPro: TB2/DP1/HVA22-related protein (IPR004345)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.14,0.72,7.01,0.76,9.44,5.43,21.85,11.55
Automatic updates:
Name: NM_001249194 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306512 (LOC100306512), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:29397105..29397291 (+ strand)
Length: 187
Type: five_prime_UTR
Position: Chr01:29397292..29397359 (+ strand)
Length: 68
Type: CDS
Position: Chr01:29397479..29397505 (+ strand)
Length: 27
Type: CDS
Position: Chr01:29397606..29397728 (+ strand)
Length: 123
Type: CDS
Position: Chr01:29398283..29398541 (+ strand)
Length: 259
Type: CDS
Position: Chr01:29399315..29399383 (+ strand)
Length: 69
Type: CDS
Position: Chr01:29399384..29399508 (+ strand)
Length: 125
Type: three_prime_UTR

>Vigan.01G222300.01 class=Sequence position=Chr01:29397105..29399508 (+ strand)
GTTCTTTTCA AAGACTACTT TGGCTGTTTG CCAACTTTCC CGCATTTTCT TTCTTACTTT TTTCACTCTT TTCCAAACCC
CTTTTCTCTC ACCTTCTTCT TCCCTCTTCA CTTTCTCGCT TCAATTTCTC CACTTTCTCA CTTCCAAGTT GAAGCTGTAG
AAAACAAAAC AACTTTCATT GCAAAATATG GGTGCTTCGG ACAACAACAA CCACTTTCTT CAAGTTGTCT TCAATAACTT
CGACGTTCTT GCTCTGTAAA TCTCCTCTCT TCTTTTCCAA ATCATATACT TTTTTTTTCA CTCTTGCTCA ATTTATGGCA
ATCATTTTGG TGTGTCTGTT ACTAAATGCA TTCTATCATT GACATTTTCT CCAGACCCTT GGTTACGCTT GCTTACCCTT
TGTAAGTATG CTGCTCCTTT TGTTGTATTT ATCTCATTTG GGAAATGAAT GTATGTCTGA ATTTTCAACT TTTATGCCTA
CCCTTTTGCC TCTATGGTCA GATATGCTTC AATTAAGGCG ATCGAGACCA AGTCTGCTGC AGATGATCAG CAATGGCTCA
CATATTGGAT TCTGTATTCC ATTCTAACAC TCTTTGAGCT CACATTTGCA AAAGTTCTTG AAGTGTGAGT CCCTCTTCTA
ATGGTCATGT TTGAGATATT ATAACTTCAT TTTCTATGCC ATATAACTTA TAAATGATCC GTTATTGAAT GTTCTCTCTC
TATTCCTTTA GAAGGACAAG GGGAAAACAT TGTCATATCA TAATCGCTTC ACAATTTAAC CATAGTTGTA ATTTTTGGAG
CATATCAAGA GTTTCACGTC TCACATTCTC TTGGTTTTGC TTACCTTCTA GTTTTTATTT GTCAAAATAA TTTGAAGAAT
TTCAAATAAG GATAAGTGTA GGTTCACACG CATGAAATTG GGCCAAGTGA CCTGATATAG TGAAAATTGT CCCATTTGTT
CGTTGCTTGG TCAAGTGGAT TTTGTTGTTG TAAAATGCTG CACTTGTGTG AAACCTAAAA TGCCTTGAAC TTTGTCTCTT
ATTGTGCTTA TGTTTGGGTA AAGATTGTGA GTGAGGATAC AATAATAGTC TTTGCAATGT TTTCTGTTTT TTGTTTTCTT
TGCTTTACAT CTGTTTAAGT GTTATTTCTC CAATATAATA TTTTGGTACT AATTTCAGGC TTCCCATTTG GCCCTTTGCC
AAGTTGATAT TCAGTTGTTG GTTGGTTCTG CCTCACTTCA ATGGGGCTGC AGTTGTTTAC AGGAATTACA TCAGACCATT
CTATATGAAT CCACAAATCC CAATTCCACA AGGCTCACAA ATGTGGTATT TTCCCCAAAA GAAATCCTTA TTCAGTGAGT
CAGATGATGT TTTAAGTGCT GCTGAGAGAT ACATGGAAGA GCATGGTACA GAAGCCTTTG AAAGACTTAT AAACAAGGTA
CACATATCAC TAATGCTTTT AGTCCAGAAT AACTGGCCCT GCTTCAAAGT TAAGATATTT CAAAATTTGC GAAAATGTGG
TTTTTGGGAC TATTCAGCTT TGCTTATATA TTATTAGGCA ATTACATGTT ACACAGAATT GGCATATTAC CCCGTGTCTA
ATTCTAAATA TGCAACATTT GTTTATGAAC TAAAATCAGA GTTGTGGACA ATAACAGGCT AGCCTGGGAG ATAACTGTCT
TGCATAAGTC CTGTTTATAA GTAAGTCGAA GGTAACTTAA CATTAGCAGA AGCATGATTG TTAAGTTACA AAACTTAATT
TTGGAGTAGT TTTCAATTTT CTCATTGAGT TCTCAAAAGA AAGTTTGGTT TTGTTTTTAT AGTAACTTGG TTCAGATTAA
ATGTAAGTAT GCCAATGTAC CTTTGAAAGT GATCAAACAT GTTATGATAA TGAGTTTATT CTCCAGAATT TCGAACACTC
CAGACATATT TGCACTTTAG TGGGGGGAGA TTTGGCTGCT TGGTATTTAT TTTAGAAATT TGCTACATAA TTCTATCTTA
GTTTTCAACA TTCAATGAAT CATTTGAGCT AGACAAGCTG GAATTATAAG CTGAAATTTC ATTTACAAGT TGAGGTACAA
TTGTTTTAGA CTTCTTGTGA TTCCCTTGTA GTAAATTTAA ACTTGTGATT TTTACGCACC GGGTTTCACT TCATTTGGGT
TTGGACTAAT ATTTGAAACT ATGAAGAACA TAATTGGTTT TGATGTGCAG AATGACAGAC AGGCTAGGGC AAGGAGGAAT
GGAAATTACA TGATCTTTGA TGACGACTAT AGATATTGAA CTTTATTTTT GTTTTCTTAA ACTTTGTTAA GGCATCATTG
CTAATATTTC ATTTTATCAT ATTTTGTGAT GTTTGATGAT GACCATATAT ATTGAACTAT GTTAATGGCT CACTTGTTCT
CCAA

>Vigan.01G222300.01
GTTCTTTTCA AAGACTACTT TGGCTGTTTG CCAACTTTCC CGCATTTTCT TTCTTACTTT TTTCACTCTT TTCCAAACCC
CTTTTCTCTC ACCTTCTTCT TCCCTCTTCA CTTTCTCGCT TCAATTTCTC CACTTTCTCA CTTCCAAGTT GAAGCTGTAG
AAAACAAAAC AACTTTCATT GCAAAATATG GGTGCTTCGG ACAACAACAA CCACTTTCTT CAAGTTGTCT TCAATAACTT
CGACGTTCTT GCTCTACCCT TGGTTACGCT TGCTTACCCT TTATATGCTT CAATTAAGGC GATCGAGACC AAGTCTGCTG
CAGATGATCA GCAATGGCTC ACATATTGGA TTCTGTATTC CATTCTAACA CTCTTTGAGC TCACATTTGC AAAAGTTCTT
GAAGTGCTTC CCATTTGGCC CTTTGCCAAG TTGATATTCA GTTGTTGGTT GGTTCTGCCT CACTTCAATG GGGCTGCAGT
TGTTTACAGG AATTACATCA GACCATTCTA TATGAATCCA CAAATCCCAA TTCCACAAGG CTCACAAATG TGGTATTTTC
CCCAAAAGAA ATCCTTATTC AGTGAGTCAG ATGATGTTTT AAGTGCTGCT GAGAGATACA TGGAAGAGCA TGGTACAGAA
GCCTTTGAAA GACTTATAAA CAAGAATGAC AGACAGGCTA GGGCAAGGAG GAATGGAAAT TACATGATCT TTGATGACGA
CTATAGATAT TGAACTTTAT TTTTGTTTTC TTAAACTTTG TTAAGGCATC ATTGCTAATA TTTCATTTTA TCATATTTTG
TGATGTTTGA TGATGACCAT ATATATTGAA CTATGTTAAT GGCTCACTTG TTCTCCAA

>Vigan.01G222300.01
ATGGGTGCTT CGGACAACAA CAACCACTTT CTTCAAGTTG TCTTCAATAA CTTCGACGTT CTTGCTCTAC CCTTGGTTAC
GCTTGCTTAC CCTTTATATG CTTCAATTAA GGCGATCGAG ACCAAGTCTG CTGCAGATGA TCAGCAATGG CTCACATATT
GGATTCTGTA TTCCATTCTA ACACTCTTTG AGCTCACATT TGCAAAAGTT CTTGAAGTGC TTCCCATTTG GCCCTTTGCC
AAGTTGATAT TCAGTTGTTG GTTGGTTCTG CCTCACTTCA ATGGGGCTGC AGTTGTTTAC AGGAATTACA TCAGACCATT
CTATATGAAT CCACAAATCC CAATTCCACA AGGCTCACAA ATGTGGTATT TTCCCCAAAA GAAATCCTTA TTCAGTGAGT
CAGATGATGT TTTAAGTGCT GCTGAGAGAT ACATGGAAGA GCATGGTACA GAAGCCTTTG AAAGACTTAT AAACAAGAAT
GACAGACAGG CTAGGGCAAG GAGGAATGGA AATTACATGA TCTTTGATGA CGACTATAGA TATTGA

>Vigan.01G222300.01
MGASDNNNHF LQVVFNNFDV LALPLVTLAY PLYASIKAIE TKSAADDQQW LTYWILYSIL TLFELTFAKV LEVLPIWPFA
KLIFSCWLVL PHFNGAAVVY RNYIRPFYMN PQIPIPQGSQ MWYFPQKKSL FSESDDVLSA AERYMEEHGT EAFERLINKN
DRQARARRNG NYMIFDDDYR Y*