GBrowse Details

Vigan.01G175100.01

Basic Information:
Name: Vigan.01G175100.01
Multiple alignment
Variant Information
Position: Chr01:20324360..20328883 (+ strand)
Length: 4524
Functional Information:
Description: Similar to Urease accessory protein ureG. [T2DLW5, Phaseolus vulgaris]
GO: Biological Process: GTP catabolic process (GO:0006184)
Cellular Component: cytoplasm (GO:0005737)
Molecular Function: GTPase activity (GO:0003924)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: nickel cation binding (GO:0016151)
Molecular Function: metallochaperone activity (GO:0016530)
Molecular Function: protein homodimerization activity (GO:0042803)
InterPro: CobW/HypB/UreG domain (IPR003495)
Urease accessory protein UreG (IPR004400)
[NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase (IPR012202)
P-loop containing nucleoside triphosphate hydrolase (IPR027417)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:109.83,151.37,6.17,4.57,12.02,11.71,20.06,5.56
Arabidopsis thaliana homolog: AT2G34470.2
Automatic updates:
Name: NM_001251306 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max Ni-binding urease accessory protein UreG (EU3), mRNA.
PubMed ID: 22271305 NCBI(pubmed)
10652150 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:20324360..20324473 (+ strand)
Length: 114
Type: five_prime_UTR
Position: Chr01:20324474..20324742 (+ strand)
Length: 269
Type: CDS
Position: Chr01:20324816..20324876 (+ strand)
Length: 61
Type: CDS
Position: Chr01:20324973..20325174 (+ strand)
Length: 202
Type: CDS
Position: Chr01:20325453..20325574 (+ strand)
Length: 122
Type: CDS
Position: Chr01:20325681..20325785 (+ strand)
Length: 105
Type: CDS
Position: Chr01:20326370..20326453 (+ strand)
Length: 84
Type: CDS
Position: Chr01:20326454..20328883 (+ strand)
Length: 2430
Type: three_prime_UTR

>Vigan.01G175100.01 class=Sequence position=Chr01:20324360..20328883 (+ strand)
AAAAATCTGT ATATTTTACT AGACCTTAGT GCTTGGATTG GAGGCGGTTT GTGCTTTGGT TTTCTTTCTA TTTCCAGAGT
CCATCACAGT GACAGTTAGC ATCAGACACA TTCAATGGCT TCTCACGGCG AACATCACCA CCACCACCAT CATGATCATG
GTCATGATCA CGATCACGAA CATGATCATG ACGGTGAAAA GGGAGAGGGG AAGTCATGGG TAGGCAAGGA TGGTAGGGTG
TACCACAGCC ATGATGGTCT GGCGCCGCAT TCTCACGAAC CCATCTACTC TCCTGGCTTC TTCAGCAGAA GAGCCCCTCC
TCTTAACAGG AATTTCAACG AAAGAGCCTT CACTGTCGGA ATTGGTGGAC CTGTCGGCAC TGGGTGGGTT TCTCTTTCTC
TGTCTATGCA GAACCCTTCA AAAGTTAAAC CCTTTTTCAT TTTCATGGCA ATGCAGGAAA ACAGCTCTCA TGTTGGCCCT
TTGTGAATTC CTTCGGGATA ACTACAGTCT CGCTGCTGTG AGTTTTTCCA CCTTCTCTCT GTCTTCCAAT TTTACTCTTA
CTTTGACTAA AGCAAAACCA AAAAAATGTG CTTTGCTTTC TTGTTTGTTT CAGGTGACTA ATGATATATT CACCAAAGAG
GATGGTGAAT TCTTGGTGAA GCACAAAGCT CTTCCAGAAG AAAGGATACG CGCTGTGGAA ACTGGGGGCT GCCCACATGC
TGCCATTCGG GAAGACATTA GTATTAATCT TGGACCTCTG GAGGAGCTTT CTAACCTCTT CAAAGCAGAT ATACTTCTTT
GTGAATCCGG GGGAGGTATT TTTCTTTATC TAATTTTTAA TTAATTACTA CAATTTAATT AAGTTTACTC ACATGTTATT
AAGTTTATTC ACTCTTAGAA ATACATGATC TTTGGTTGCT ATGTTTAGAA TCTAGTTAAC ATGTTTTGGA TGATTTTTAC
ATTAAACCAG ATGTTGAACA AGCTAAACGA TTGTTTGTAT GAATTAGTTA TGTGTGTTCA TAGATATGTG ATTGTTTTTT
AAATTTAGAT TCCAAGAGAT TTGGATATTC ATTTGAGTTT CCTTCTTCTG CAGATAACCT GGCTGCCAAT TTTAGCAGGG
AATTGGCTGA CTACATAATT TACATAATAG ATGTATCTGG TGGTGATAAA ATTCCTAGGA AAGGTGGTCC TGGAATCACA
CAAGCTGATC TCCTTGTAGG TGCTATTTGC ATAGATCTTG CACTGTTCTT GTTACAGATC CATCAATACT TGTTGCAAGA
TTTTAGAATA TGATTGTGGA ACTGGTTGGA CTTTATTCCA GGTGATAAAC AAGACTGACC TTGCTCCGGC AATTGGGGCT
GATTTAGCAG TCATGCAGCG GGATGCTTTG CGGATGAGAG ACGGAGGACC ATTTGTCTTT GCACAGGTTA TTTAAGAACA
TCATTTATTG GAACAATGGT GTTATACATC TTAATTGTGG TGTAATACAC TTAAACCCCA TGGTATATCC AAGTTTCAGC
TTTTCACTTA GGCCTACTGT GTCCAGTTTT TGCATGCTTT GTGACAATAA ATATACAGCA GTGAACATTC TATTGGCAAT
TCTGTGCTTT CTCTTACATG TTCTTTTTAA GGTTAGAATG TTTATAAGAC TTACCTTTTT GACTTTGGTT TTTTATTGCA
TTTTTCCCTT GCTGAAACAA ACTGAGACCT GTTGTCTTAC ACCAATAATT AGTTCTCCAC ATCATGCACG TGTTCTAATG
CAAATTTGTA TACAGATCCC AATTATCATT CACTTCCTTT CAGCATTGAA GTAATAGCAA AACTGGTTGT GAGCTGCACC
TTAATCAACC CTCACTAGAC TCTTTTTTTC AGCTTTCCAA TTTCTAGCAT CCTAATCAAA CTGTTTTTTA TCACTCATAA
TCTGCATCTT TATCATGATC TTGAACTACA AACAATCCTT TAATTTTTCA CCTCTTTTCT TCTCAACTTG ATTTACAAAT
GTATGTGCAG GTGAAGCATA AGGTTGGAGT AGAAGAAATT GTGAATCATG TCTTACAGGC GTGGGAAGCA ACGACAGGGA
ATAAACTCCA TTAACGTGTC TTTCTAAAAT TGTTTTCTTT TTGTCGCATA TTCTGATAGC ATGTTGAGAA ACAACTTCCC
GAACATTCTT GTTCCTGCAT GTTACCATAA TAACTTCATC GACATGTTAC TGCTTGGACC TATTAATCTT TGTTACTGTC
GTCAAATGGA TTGTTGTTGT TTAAGAGTTA CACAAATGTC AAACAATATG GAAGTTGAAC ATCAAGATAA GATATCTGTA
CAAACTTATT ATGAAAAAAG AAGTATACCC ACATAGGTTG TGGTCATAAA CCAAGACATG AACAACAAGA TATATTCAAC
AATTTGAAGG AAGACCACGA CAATATACTA AAACAATATC AATGTGTGGG ATAAGTTGTC GAAAATAATT TTTGATTGAT
TAATCATATT GTGTATTTCT TTGTAATATC TTGCAATTTA AATTTACCAA AATTTATTCA ATAATTTTTA ACATTTAAAA
AATTTATGTT ACCGAAACTT AAAAACTAGT CACAAAATTT TAAAATTAAA AATAGGAGAA TCACCTGATC GTAGATACAA
CTTCATCCAA CTAAGAAACC GATCAATCTG AATTTGAAAA GATAGCTGAA AATGGAGAGA ACTTTGAAGG AGTTGGCTAA
TCCAGATATT GGATGCAAAC CTTTGTTCGT ACTGCTGCCA CAATTGCAGG AAGGCGCAAT CAGTTATGAA TTAACATCAG
GCCTAATACA TTTGTTACCT AAATTTTATG GACTGGCTGG AAAAGATCCT CACAAACACC TGATGGAATT GTGGTGTGTT
CAATCATGAA GCCAGCTGAA GTGCCTGAAG AACTGATCAA GATGAAGGCC TTCCCATTTT CTCTCTCTGA CATTGCAAAG
GATTGGCTAT ACCTTCAACT TACCCCAAAT TACCATTTGG AATGAGATGA AAAGGAGGTT TCTGGATAAA ATTTTCCTGC
TTCAAGAACT GTCTCAATCA GGAATGAAAT TAGTGGTATA AGACAGCTTC AAAGAGAAAG TTTGTATGAT TACTAGGAGA
GGTTCAATAA GTTGTGTTCC ACATGCTCTA TCTATCTATC AGATTAGTTA ATAGCTACTG ATACAATATT TTTATGAGGG
TCTGCTGCCA ATAGAGAGGA GTATGATAGA TGCAGCCAGT GGAGGCACAC TCATGGATAC CCCTGCTGCC AGGTATTTGA
TATCCAAAAT GGCTGAAAAC TCACAGCAAT TCGATTCTAG AAATACAGGC AAAAATGTGC ATGACGTAAA GACCAGTTCT
ACAACAGAAT TTGATGGCCA AAGGCTGGAA AATAAAATAA CCGAACTAAC TTTGTTGGTC AGACAGTTAG CTATAAAAGA
GCAAGTATGC TCAGTGCAGA AGACATGTTG AATATGTAGT TTAAATGACC ATTACCCTGA CGCTTGCCCT CAGCCAACCA
TGGAAAGTGT AGCTGGAATT TCTAGTTTCT GTCCAGGTTT CCACTTTCCA GTTTCTGCCC AAAAAACAAA TCAGCTTAGC
CACTCCATTT TAGCTTTAGC CCATATCACT TTTGACTACT TGTACTGACT TTGCAAAATT CATTAAAAAT TGTGCTAACT
TCTATTAGTG TATATTTGTT TGTAGAGTCT TTACATTGCA TGTATTAGTA GTAGATTCTG CTTTGCCGAA AGTTGGTGGT
GAAAAACTTG AAATGATCAT TACTTTTGCT ATGGATCTTG GTGAATTGCA AAGTTGTTAG AAATTGTGTT TTCATTCCGC
TGGCCAACTT CCAAAGGAGG CTGGGGTTCC AAATTTTCAA AATTCCACCA TTTATTATCT CTTTGCTATT TTCTTAGTAT
TCTTTTTCCA TTTTTCTAGA TTTTAGAGAT GTATTTCACT TACCTATAGT ATTCAGAACA GTCTAAGACA TTTTGTGGTA
TTGTCTAGTA GTTAGTAGAG ATTTTCCGTG ATTTTAAATT TTAGATTCAT TTTATACGTA GAACATTCAT ATAGCTGGTC
ATTTCTCATA GTTCATTGTT TCACTGTTTT TCCGTTTTCT CTGCTGTTTC AATCTTTCAC TGTTCACTGC TGCAGTTTTC
AGTATGACGC TGTTCTCAGC CAAATGTTAC TCCTCATGGT GCTATGGAAA TTAAAGATGA AGTTTCCAGA ACAAAGCCTT
CGAGTAAACT GCATTTTTTG GATTAAGAGG AAATAACACA TGGAATTTGT GATTAGAAGA GAACAAGAGT AGAAATTTCA
AAGTTAATGA ACATCAATTG AAGATTTTTC AAGAAAGGCA ACCTGCAGTA GATGAGGAAA TAAACCTGGA GTTGACAGAA
CCTGTGATAC AGAAATGATG TGCAGAACAA TTTTCAAGTT TTAGCTTTTA GGGCTTTGTT TTGAAGAATG GATCTGCGGC
GTCAAAATTA GGGTTAATGA TAAAACTTTT GATTTCATAT CGGG

>Vigan.01G175100.01
AAAAATCTGT ATATTTTACT AGACCTTAGT GCTTGGATTG GAGGCGGTTT GTGCTTTGGT TTTCTTTCTA TTTCCAGAGT
CCATCACAGT GACAGTTAGC ATCAGACACA TTCAATGGCT TCTCACGGCG AACATCACCA CCACCACCAT CATGATCATG
GTCATGATCA CGATCACGAA CATGATCATG ACGGTGAAAA GGGAGAGGGG AAGTCATGGG TAGGCAAGGA TGGTAGGGTG
TACCACAGCC ATGATGGTCT GGCGCCGCAT TCTCACGAAC CCATCTACTC TCCTGGCTTC TTCAGCAGAA GAGCCCCTCC
TCTTAACAGG AATTTCAACG AAAGAGCCTT CACTGTCGGA ATTGGTGGAC CTGTCGGCAC TGGGAAAACA GCTCTCATGT
TGGCCCTTTG TGAATTCCTT CGGGATAACT ACAGTCTCGC TGCTGTGACT AATGATATAT TCACCAAAGA GGATGGTGAA
TTCTTGGTGA AGCACAAAGC TCTTCCAGAA GAAAGGATAC GCGCTGTGGA AACTGGGGGC TGCCCACATG CTGCCATTCG
GGAAGACATT AGTATTAATC TTGGACCTCT GGAGGAGCTT TCTAACCTCT TCAAAGCAGA TATACTTCTT TGTGAATCCG
GGGGAGATAA CCTGGCTGCC AATTTTAGCA GGGAATTGGC TGACTACATA ATTTACATAA TAGATGTATC TGGTGGTGAT
AAAATTCCTA GGAAAGGTGG TCCTGGAATC ACACAAGCTG ATCTCCTTGT GATAAACAAG ACTGACCTTG CTCCGGCAAT
TGGGGCTGAT TTAGCAGTCA TGCAGCGGGA TGCTTTGCGG ATGAGAGACG GAGGACCATT TGTCTTTGCA CAGGTGAAGC
ATAAGGTTGG AGTAGAAGAA ATTGTGAATC ATGTCTTACA GGCGTGGGAA GCAACGACAG GGAATAAACT CCATTAACGT
GTCTTTCTAA AATTGTTTTC TTTTTGTCGC ATATTCTGAT AGCATGTTGA GAAACAACTT CCCGAACATT CTTGTTCCTG
CATGTTACCA TAATAACTTC ATCGACATGT TACTGCTTGG ACCTATTAAT CTTTGTTACT GTCGTCAAAT GGATTGTTGT
TGTTTAAGAG TTACACAAAT GTCAAACAAT ATGGAAGTTG AACATCAAGA TAAGATATCT GTACAAACTT ATTATGAAAA
AAGAAGTATA CCCACATAGG TTGTGGTCAT AAACCAAGAC ATGAACAACA AGATATATTC AACAATTTGA AGGAAGACCA
CGACAATATA CTAAAACAAT ATCAATGTGT GGGATAAGTT GTCGAAAATA ATTTTTGATT GATTAATCAT ATTGTGTATT
TCTTTGTAAT ATCTTGCAAT TTAAATTTAC CAAAATTTAT TCAATAATTT TTAACATTTA AAAAATTTAT GTTACCGAAA
CTTAAAAACT AGTCACAAAA TTTTAAAATT AAAAATAGGA GAATCACCTG ATCGTAGATA CAACTTCATC CAACTAAGAA
ACCGATCAAT CTGAATTTGA AAAGATAGCT GAAAATGGAG AGAACTTTGA AGGAGTTGGC TAATCCAGAT ATTGGATGCA
AACCTTTGTT CGTACTGCTG CCACAATTGC AGGAAGGCGC AATCAGTTAT GAATTAACAT CAGGCCTAAT ACATTTGTTA
CCTAAATTTT ATGGACTGGC TGGAAAAGAT CCTCACAAAC ACCTGATGGA ATTGTGGTGT GTTCAATCAT GAAGCCAGCT
GAAGTGCCTG AAGAACTGAT CAAGATGAAG GCCTTCCCAT TTTCTCTCTC TGACATTGCA AAGGATTGGC TATACCTTCA
ACTTACCCCA AATTACCATT TGGAATGAGA TGAAAAGGAG GTTTCTGGAT AAAATTTTCC TGCTTCAAGA ACTGTCTCAA
TCAGGAATGA AATTAGTGGT ATAAGACAGC TTCAAAGAGA AAGTTTGTAT GATTACTAGG AGAGGTTCAA TAAGTTGTGT
TCCACATGCT CTATCTATCT ATCAGATTAG TTAATAGCTA CTGATACAAT ATTTTTATGA GGGTCTGCTG CCAATAGAGA
GGAGTATGAT AGATGCAGCC AGTGGAGGCA CACTCATGGA TACCCCTGCT GCCAGGTATT TGATATCCAA AATGGCTGAA
AACTCACAGC AATTCGATTC TAGAAATACA GGCAAAAATG TGCATGACGT AAAGACCAGT TCTACAACAG AATTTGATGG
CCAAAGGCTG GAAAATAAAA TAACCGAACT AACTTTGTTG GTCAGACAGT TAGCTATAAA AGAGCAAGTA TGCTCAGTGC
AGAAGACATG TTGAATATGT AGTTTAAATG ACCATTACCC TGACGCTTGC CCTCAGCCAA CCATGGAAAG TGTAGCTGGA
ATTTCTAGTT TCTGTCCAGG TTTCCACTTT CCAGTTTCTG CCCAAAAAAC AAATCAGCTT AGCCACTCCA TTTTAGCTTT
AGCCCATATC ACTTTTGACT ACTTGTACTG ACTTTGCAAA ATTCATTAAA AATTGTGCTA ACTTCTATTA GTGTATATTT
GTTTGTAGAG TCTTTACATT GCATGTATTA GTAGTAGATT CTGCTTTGCC GAAAGTTGGT GGTGAAAAAC TTGAAATGAT
CATTACTTTT GCTATGGATC TTGGTGAATT GCAAAGTTGT TAGAAATTGT GTTTTCATTC CGCTGGCCAA CTTCCAAAGG
AGGCTGGGGT TCCAAATTTT CAAAATTCCA CCATTTATTA TCTCTTTGCT ATTTTCTTAG TATTCTTTTT CCATTTTTCT
AGATTTTAGA GATGTATTTC ACTTACCTAT AGTATTCAGA ACAGTCTAAG ACATTTTGTG GTATTGTCTA GTAGTTAGTA
GAGATTTTCC GTGATTTTAA ATTTTAGATT CATTTTATAC GTAGAACATT CATATAGCTG GTCATTTCTC ATAGTTCATT
GTTTCACTGT TTTTCCGTTT TCTCTGCTGT TTCAATCTTT CACTGTTCAC TGCTGCAGTT TTCAGTATGA CGCTGTTCTC
AGCCAAATGT TACTCCTCAT GGTGCTATGG AAATTAAAGA TGAAGTTTCC AGAACAAAGC CTTCGAGTAA ACTGCATTTT
TTGGATTAAG AGGAAATAAC ACATGGAATT TGTGATTAGA AGAGAACAAG AGTAGAAATT TCAAAGTTAA TGAACATCAA
TTGAAGATTT TTCAAGAAAG GCAACCTGCA GTAGATGAGG AAATAAACCT GGAGTTGACA GAACCTGTGA TACAGAAATG
ATGTGCAGAA CAATTTTCAA GTTTTAGCTT TTAGGGCTTT GTTTTGAAGA ATGGATCTGC GGCGTCAAAA TTAGGGTTAA
TGATAAAACT TTTGATTTCA TATCGGG

>Vigan.01G175100.01
ATGGCTTCTC ACGGCGAACA TCACCACCAC CACCATCATG ATCATGGTCA TGATCACGAT CACGAACATG ATCATGACGG
TGAAAAGGGA GAGGGGAAGT CATGGGTAGG CAAGGATGGT AGGGTGTACC ACAGCCATGA TGGTCTGGCG CCGCATTCTC
ACGAACCCAT CTACTCTCCT GGCTTCTTCA GCAGAAGAGC CCCTCCTCTT AACAGGAATT TCAACGAAAG AGCCTTCACT
GTCGGAATTG GTGGACCTGT CGGCACTGGG AAAACAGCTC TCATGTTGGC CCTTTGTGAA TTCCTTCGGG ATAACTACAG
TCTCGCTGCT GTGACTAATG ATATATTCAC CAAAGAGGAT GGTGAATTCT TGGTGAAGCA CAAAGCTCTT CCAGAAGAAA
GGATACGCGC TGTGGAAACT GGGGGCTGCC CACATGCTGC CATTCGGGAA GACATTAGTA TTAATCTTGG ACCTCTGGAG
GAGCTTTCTA ACCTCTTCAA AGCAGATATA CTTCTTTGTG AATCCGGGGG AGATAACCTG GCTGCCAATT TTAGCAGGGA
ATTGGCTGAC TACATAATTT ACATAATAGA TGTATCTGGT GGTGATAAAA TTCCTAGGAA AGGTGGTCCT GGAATCACAC
AAGCTGATCT CCTTGTGATA AACAAGACTG ACCTTGCTCC GGCAATTGGG GCTGATTTAG CAGTCATGCA GCGGGATGCT
TTGCGGATGA GAGACGGAGG ACCATTTGTC TTTGCACAGG TGAAGCATAA GGTTGGAGTA GAAGAAATTG TGAATCATGT
CTTACAGGCG TGGGAAGCAA CGACAGGGAA TAAACTCCAT TAA

>Vigan.01G175100.01
MASHGEHHHH HHHDHGHDHD HEHDHDGEKG EGKSWVGKDG RVYHSHDGLA PHSHEPIYSP GFFSRRAPPL NRNFNERAFT
VGIGGPVGTG KTALMLALCE FLRDNYSLAA VTNDIFTKED GEFLVKHKAL PEERIRAVET GGCPHAAIRE DISINLGPLE
ELSNLFKADI LLCESGGDNL AANFSRELAD YIIYIIDVSG GDKIPRKGGP GITQADLLVI NKTDLAPAIG ADLAVMQRDA
LRMRDGGPFV FAQVKHKVGV EEIVNHVLQA WEATTGNKLH *