GBrowse Details

Vigan.01G121300.01

Basic Information:
Name: Vigan.01G121300.01
Multiple alignment
Variant Information
Position: Chr01:11810713..11813686 (- strand)
Length: 2974
Functional Information:
Description: Similar to uncharacterized protein. [C6TNX8, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.97,0.10,2.88,1.07,0.93,2.79,0.02,1 .76
Automatic updates:
Name: NM_001289337 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100814011 (LOC100814011), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:11810713..11810924 (- strand)
Length: 212
Type: three_prime_UTR
Position: Chr01:11810925..11811280 (- strand)
Length: 356
Type: CDS
Position: Chr01:11812329..11812409 (- strand)
Length: 81
Type: CDS
Position: Chr01:11812547..11812631 (- strand)
Length: 85
Type: CDS
Position: Chr01:11813201..11813332 (- strand)
Length: 132
Type: CDS
Position: Chr01:11813333..11813686 (- strand)
Length: 354
Type: five_prime_UTR

>Vigan.01G121300.01 class=Sequence position=Chr01:11810713..11813686 (- strand)
TATGTCATTA ATTTAGTTTT TAAATTTTTT GAGCATTTAT GCGTATATAG CATAAATTAT TTAATCCGTA GATAAATTTT
CCGACTACTA GCCATTCCAC TTTATCGTTT TCGGGACGGT CTGAATTGAC CGGGCTAACC ATTTTAGAGT GGATGTGTTA
GGGAAGTAAT AGAATCAAAT TTTCACCATT GATGGACTCA ACTTGTGTTC ATAATCCAAC GCAGTTTTGC ATCAGACTAT
TTTTATCTGC ATTTGAACTG AAGAATTGTT TACTGTTTTC GGTGTTTGAT TTTCTATCTT CCTTTCTTCT GTGTTTCCTT
TAAATATGGG TGGGGTTTAT TTTAGGCTCT GCTAATGTCA ATGGCTGATT TGGAGGGCGT AGAAGGTTAC ATGCCTTCTG
CAGAATATGT GGAAGACAGT AATGAAGCTC TCATTAACTT GACTGATTCA ACTGAACTTT TGTTTCTTAA GCTGCCTTCT
TCCAATGTAA GTTTGTCCTT TATGCCTTTG GTTTTTTTTT TTTTTTTTTG AACTGAATCT TAACTGTTGA TGCCAACTAA
ATGAAAAAGA AAAATCCTTA AGGATTGATA TCATTGTTAT TACAAAAGTG AATGATCAAG TATAGTATCA AGTAAAATTA
AAAATAAAAA TTAGTTCATT GGCTTTTGTT TCCAAACAAT TAGGTTTCTT TTTTTATCAA GCCTCTCTAC TAAGCGTAGT
TTTTATTGTG TTATATTTTG TTTGGAGATT AAAAGTTGCA GTACATGTTT CATGTTAATT TTTGTTGTGC TAGATCTCAT
TAAAGAGTGT GAAAAAATAC ATTTCTGTGT ATTTCCTCTA TTCATTTGCT GACGTTTACC CCTTACTTTA TTATAGGAGA
CTGATCAATT TTTATAAATT TTTAAGGTTG CATTTTATTC AAATGAACTG GTGTTTGTAT TGGTGGTGTT TCCTTCCATC
TAGCAGTTAG ATGATGGAAG AAGAGTCCTT TTTGGTGTTG TGTTAATTAT TGCCATTGTT GTCTTGCTTG ATGTGTGTAT
GATGCTTTTG TCCAGGATTT TTTATCTGAC ATAAATGGAC AGAAATTGTT TCTCACACTT AACAATGGTG GTAAGCTAGC
CAGCTTTGAG GGTTCATCAG GTAAATAAAA TTAATCATCT GTGTTCTCAA CTTCAAGTTT TGCATGATTG ATCTCTAAAT
GGTGTTTTTT TTTGTGTGTG GGGAAATGAA TATGATTGCT TTCTGCAAGG ACCTTAATTT TCATATTATG TTGGCAGGTA
AGGTATATGA TTTTGTAAAC TTTTTTGCTC AGAAGCCAGA TGAAACAGTT TTTGTTTCCT CTACAGAACC AACAATTGGT
AAGCATCCAT ATATTTTGTT TTTCTTGTTT AATGTCATAT GAAGGATATC AACAATAATT TTGAGAATTA TTCTAGCTCA
CAGAGAGCAA GAGCTTTTTT GTTATTTATT ATTTGAGGTA GACTCTCAAG TTATTAGAAC ATGTAAGATG GGACTTTATT
TGGTCATTTC AATGTAAGAA TTATTTGAGA AGTATCCCAG CTTTCCGACA GAGCTTTATT GTTAGTTACT ATAATTTGAG
GTAAAATCTC AAGCCATAAG AAGAGTAGTG TCTGGTTTTG CATCAAGTGT TGTTTGAGTA AATAACTTTT ACAAAGGTGT
TGAATGTACT TGGTGCAACA TTATATCTAA TGAGTTATGA TAGTAAGTGT TCATTTGCTC CACATTTTTT CTTTTAAAAA
TTACTTCTAA AAAAATTTCG GTGTGTCTGT TTAACCTTCT AAAATAATAA AACATGAAAA TTCTCATTAT TTTTTACAAG
CTGCTTTGAG TAGCCTTCTT TTGAAAAACT TCTAGATTCA ACCATTATCA CTTTTGCCAA ACTGGCCAGC CAGCCCGTTT
CTCCATCTCA ACATTTGCTA GTAATTTTCA TGAGTTTCAA GTCTGGTTTC TATCCATTTG GTGAACCATG AAACCTCTAA
TCTGAGGTTT GATTGGTTTG TTCAATTAAT GTTTTTCTTA AAAAAAGCGT GTGAATATAA GTCCAATGTT CATGTAACAG
GAAGTTATAT TGTAAGTACA GTGCCAAATG ATTTACTTTT GATTTTGAAC TTGACCAGCA GCTTTCTCAT TAGCTTTGTT
TTTCAGAAAC TGTGAATTCA CGTGGATCTC ACTCCCGATT TTGTTCCCCA TTCCCCTTTC ACCCGCCCTT TTTATATTTG
GATTGGATTT TCCCTTGCTG TATTTGACTA CTTTTCTTGT CACTTTGTCT TGCTAGAATC TGGTTCTTGC GAGTGTTTAA
TAGCACTTTT AATTTTTTAT AGGTTTCTAA TTTGTAGCCT TTGAATTCAA GCATTAAGAA AAGTTATTTC TTTTGCTTTA
CTGCAGCAAA GATTTCAATG CGAGTTTCAA CCATCCATTA CCCTGATCCT AAAGAACTTG AGAACCTCAA TTCAATCAAC
GCAAGACATG CACATCGAAA TTCTTCTGGA ATCACTGGGA CAACTTCATC TCGGTACTTT CCTATGCAAA GTGGTGGACG
TGCAGCTTCA TCAAAAGGTA GCAGACAGAG AAGCTCCTTG TCTGGAGTTA CTGAGCCATC AAGTATTTCG AAAAAAGGAC
ACGTGTCTAA ATCTAAATTC AACTTGTCTG AGTCCTCACA TGGTCACAGC ACTGGCATTT CCTCTATGTC CGTAGACAAT
TCTCATGAAA GAAAACCAAA GAGAAGAAAA CACACGGAAT AATGTTTCCT ATACCCGCCA TGGCCTTTAA TAGTGTAATT
TTTAAAATTA ACATTATCCC GGGCCTAACT ATATAGGAAA GAATAGGGCA ACACTTTTAT GTTGCAAAAG GATGATAAAT
TTTTGTATTT TCTTTGTATT TTTCAAATTG TCATTTACTT CAGTTGCACA ATGCTCACTG ATTTAAGGAC CCTTTCTTTT
CTCATTTTTC TGGC

>Vigan.01G121300.01
TATGTCATTA ATTTAGTTTT TAAATTTTTT GAGCATTTAT GCGTATATAG CATAAATTAT TTAATCCGTA GATAAATTTT
CCGACTACTA GCCATTCCAC TTTATCGTTT TCGGGACGGT CTGAATTGAC CGGGCTAACC ATTTTAGAGT GGATGTGTTA
GGGAAGTAAT AGAATCAAAT TTTCACCATT GATGGACTCA ACTTGTGTTC ATAATCCAAC GCAGTTTTGC ATCAGACTAT
TTTTATCTGC ATTTGAACTG AAGAATTGTT TACTGTTTTC GGTGTTTGAT TTTCTATCTT CCTTTCTTCT GTGTTTCCTT
TAAATATGGG TGGGGTTTAT TTTAGGCTCT GCTAATGTCA ATGGCTGATT TGGAGGGCGT AGAAGGTTAC ATGCCTTCTG
CAGAATATGT GGAAGACAGT AATGAAGCTC TCATTAACTT GACTGATTCA ACTGAACTTT TGTTTCTTAA GCTGCCTTCT
TCCAATGATT TTTTATCTGA CATAAATGGA CAGAAATTGT TTCTCACACT TAACAATGGT GGTAAGCTAG CCAGCTTTGA
GGGTTCATCA GGTAAGGTAT ATGATTTTGT AAACTTTTTT GCTCAGAAGC CAGATGAAAC AGTTTTTGTT TCCTCTACAG
AACCAACAAT TGCAAAGATT TCAATGCGAG TTTCAACCAT CCATTACCCT GATCCTAAAG AACTTGAGAA CCTCAATTCA
ATCAACGCAA GACATGCACA TCGAAATTCT TCTGGAATCA CTGGGACAAC TTCATCTCGG TACTTTCCTA TGCAAAGTGG
TGGACGTGCA GCTTCATCAA AAGGTAGCAG ACAGAGAAGC TCCTTGTCTG GAGTTACTGA GCCATCAAGT ATTTCGAAAA
AAGGACACGT GTCTAAATCT AAATTCAACT TGTCTGAGTC CTCACATGGT CACAGCACTG GCATTTCCTC TATGTCCGTA
GACAATTCTC ATGAAAGAAA ACCAAAGAGA AGAAAACACA CGGAATAATG TTTCCTATAC CCGCCATGGC CTTTAATAGT
GTAATTTTTA AAATTAACAT TATCCCGGGC CTAACTATAT AGGAAAGAAT AGGGCAACAC TTTTATGTTG CAAAAGGATG
ATAAATTTTT GTATTTTCTT TGTATTTTTC AAATTGTCAT TTACTTCAGT TGCACAATGC TCACTGATTT AAGGACCCTT
TCTTTTCTCA TTTTTCTGGC 

>Vigan.01G121300.01
ATGTCAATGG CTGATTTGGA GGGCGTAGAA GGTTACATGC CTTCTGCAGA ATATGTGGAA GACAGTAATG AAGCTCTCAT
TAACTTGACT GATTCAACTG AACTTTTGTT TCTTAAGCTG CCTTCTTCCA ATGATTTTTT ATCTGACATA AATGGACAGA
AATTGTTTCT CACACTTAAC AATGGTGGTA AGCTAGCCAG CTTTGAGGGT TCATCAGGTA AGGTATATGA TTTTGTAAAC
TTTTTTGCTC AGAAGCCAGA TGAAACAGTT TTTGTTTCCT CTACAGAACC AACAATTGCA AAGATTTCAA TGCGAGTTTC
AACCATCCAT TACCCTGATC CTAAAGAACT TGAGAACCTC AATTCAATCA ACGCAAGACA TGCACATCGA AATTCTTCTG
GAATCACTGG GACAACTTCA TCTCGGTACT TTCCTATGCA AAGTGGTGGA CGTGCAGCTT CATCAAAAGG TAGCAGACAG
AGAAGCTCCT TGTCTGGAGT TACTGAGCCA TCAAGTATTT CGAAAAAAGG ACACGTGTCT AAATCTAAAT TCAACTTGTC
TGAGTCCTCA CATGGTCACA GCACTGGCAT TTCCTCTATG TCCGTAGACA ATTCTCATGA AAGAAAACCA AAGAGAAGAA
AACACACGGA ATAA

>Vigan.01G121300.01
MSMADLEGVE GYMPSAEYVE DSNEALINLT DSTELLFLKL PSSNDFLSDI NGQKLFLTLN NGGKLASFEG SSGKVYDFVN
FFAQKPDETV FVSSTEPTIA KISMRVSTIH YPDPKELENL NSINARHAHR NSSGITGTTS SRYFPMQSGG RAASSKGSRQ
RSSLSGVTEP SSISKKGHVS KSKFNLSESS HGHSTGISSM SVDNSHERKP KRRKHTE*