GBrowse Details

Vigan.01G076300.01

Basic Information:
Name: Vigan.01G076300.01
Multiple alignment
Variant Information
Position: Chr01:6139086..6141794 (+ strand)
Length: 2709
Functional Information:
Description: Similar to uncharacterized bolA-like protein C8C9.11-like. [XP_004503975.1, Cicer arietinum]
InterPro: BolA protein (IPR002634)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:43.55,58.24,41.64,50.62,46.48,76.71,63.25,42.47
Arabidopsis thaliana homolog: AT5G09830.1
Automatic updates:
Name: NM_001250196 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500634 (LOC100500634), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:6139086..6139206 (+ strand)
Length: 121
Type: five_prime_UTR
Position: Chr01:6139207..6139269 (+ strand)
Length: 63
Type: CDS
Position: Chr01:6141198..6141220 (+ strand)
Length: 23
Type: CDS
Position: Chr01:6141327..6141522 (+ strand)
Length: 196
Type: CDS
Position: Chr01:6141523..6141794 (+ strand)
Length: 272
Type: three_prime_UTR

>Vigan.01G076300.01 class=Sequence position=Chr01:6139086..6141794 (+ strand)
AAAAAATTAA TACTTTAATC ACTGCTTTCA TTTTATAAGC GTACTGAGAA CGCAAGAAGA GAAGCGATAT ATATATATAT
ATATATATTG ATTCCTTGAA GGAGAAAGTG AAAGAAGAGA GATGGGTGTG ACGAAGGAAA ACGTTGAAGC ATCCTTGAAG
GCCAAACTCA ACCCTTCTCA TCTTGTAAGC CTTTCCTTCT CTTTCCTCTT CTTACTCTGC TCTTCGCTCA CTCAAACCCA
ATCTCTCTGT TTGTTCTTTT GAGTTATCAA ATTAAGAAGT ATTTCAACCT TTTTGCATGC TATGCCACAT AATAAGGTTG
TAGTTTGCTG ATCGTCCCCT TTTCTTTACT GGGTTCTAAT TAATCTTTAT CAAGAGTTGT CCAAATTCAC CGTTCTTTAA
GTTCTGCATT CAATTGAGCT CTCCTTTCTT GTTTTTACCC AAATCCCAGG AATGGTTTCG CTCTATGAAC ATTGTTTCTT
TCGTAGCATT GGTAGGGAGC CTAGAAATTT GAAGACTTGT TTGGATCAAC TTTTCTATAA AGCATTTCTA GTAAAAAATA
AAATAAAATA GAAATTAAAA TAAGTTTTTG TTTAAGTTAA TATTAATACA GGTATAAGTT AATTTCTAAA AATTTTGTGA
GCTTGTGGAG AAACTAATTT TGATTTCTTC TCTTAAAAGT GGTGTGGAGA AATTTCTCCA ATCTGGTTCT TACTTTCTAT
ATAGCCATAA ATACCGAATG GATTGGTTTA TCTAGAGAAC CAATGGATTG GTTTGTGGGT AGCAATTTGT GGTTAACCTG
CGAATTGTGT CAGTTCCATT CTTGCAGAGT CAAGAAAATG ACAGTGTAGT CAAGATGGGT AATGGGTGGA ATTTGGAGTT
GATGAAGATG GAATGGGAAG GGGAGAAATG GAGCAGCCCA ACTGGAGAAT GGGTTTGCAG CAGTATTGGG AGGGAGTGGG
AATGGAAATG CCCGAAGAAC TCCAATTGCA CTCTACAAAT GATGATGATT GTGGATCGTT ACGTCAGTGT GTCTAATAAT
TCTTCAATTT CTTTGTATCT TTGTGTATTT CTCTTTGATG GGTGTGGAAG GGAAGGAAAC CCTTGCATCA CAAGGCAAGT
ATAAAAGCGT ACCGCAACTA GCAATTATAT GCCCACGTCC TTGGCAAAGT GGCATGCAGC ATATCCAAAT CTTTAACATG
TACCGCCAGA ATATATATCT TTGGCTGTGT GATTTCTTTT CCATAGAGTT ATACTGCTTT GTTCTTGTTC GTTGTTCCTT
TTAATGAACA TTAGTAATAT TTTGTCCCGA GTTATATCCA CATTCCAATT TTTTGTTGCA CAAAGGCGGA ATGATCTTGT
GCAAACTATC TCCCTCGCCA ACTAGGCTGT CTCATGCAGG GTAGTCAGTT TCTTATCTGA CTGCAACCTT TTCTAGATAT
CAAAGAGTCA TTGACATATA CACTTTCTTC TCCTACTAAG TTTATTAACT TTGATATTTA TTTTAATTCC GTAAGAGTAG
ATGATTCATG GTGCTTCTAC TTATCTGTTG GATCTTGGTT GTTTAGATAA TGCATTGAAA TTTTATGCAA TCTAAAAATT
TCATGTTCTA CAGGCTACCT GTTATTATCT ATGGCTATCA GAAATCCATA TAACAATTTT GGAATTTCCT TAGATATTGA
CAGTCTGAAT GACTTATGCA GTGACCTTGG ATTTAGTGTT GAATCTTGAA GCTTTCGCAC ATGTCCAATC TTATTGTTAC
AAAAATTTAC TTTTGCCAAC ATTATGGTTT GCTTTATTAC AAAATCTTCT TTCAGTACGT CAACGGAGAG CTTTCCCCTT
GCGTGTCACA TGCGGTCTGT AATATGGAAT TTGTTGTGCA TTAACGTGAA AATTTGTTAA ACTTCAAGGG GTTATTTATA
AGGGTTTAGG GATTGTCTGT TAATTCTAGC TTCTTTTAAT AATGCCATAG TTTGTCTAAG TTCATAGGAG TTACGTCTAA
CAGAACAAAT TTTATGCACC ATAGATAATG AGTCTATTTC AGGGGTGTAC TGAGTTTGAC ACTCACTTTT CTTAAATATT
TCCGTTCTAA TTGTATTCTA TTTGTGTTTC AGGAAGTGGT TGATACATCT GGAGGGTAGG TTTCTTTCCA CTTACAGACC
TCGTGTCCTC TACTTATAGC ACTGCTTACT TGCTCCGTTT TTTATCTTAC AATCTTGTAA TTTCCGTGTT GTGGCTATTA
GGTGCGGCGC TAGTTTTGTA GTGGAGATTG TATCAGAACA ATTTGAAGGA AAAAGGCTAC TGGAGAGGCA TCGAATGGTG
AATGCTGCCT TAGAGGAGGA ACTGAAAGAG ATTCATGCTC TCTCGATAAA GAAAACTGTT ACCCCAGAGC AGTGGAAACA
ACAGCAAGAA GCCAACCAAT CAAATGCTGC TGCCTAGATC ATATGTTTCG GTTATAATCA TTTATAAATA AGAAATCCAG
TGTGTTACTG ACTTTTGACA ATGTTTATGG ATTTTAGCTC TCTGTACTTT TATCGACACT CAAATTTGTA GCTGTAGTAC
TAAAGTCAAG TTTACAAAAT TTCTTCCTTT CCCCTAGTTA TTAAGTAACG TGACCCTCTT TGGGTAGAAA CTTTTACATC
AACTACACTT TGTTGAGCGA CCCCCTTCAA GTAGAAACTT TGAAATCAAT TGTAGTCGTA AAACACCCA

>Vigan.01G076300.01
AAAAAATTAA TACTTTAATC ACTGCTTTCA TTTTATAAGC GTACTGAGAA CGCAAGAAGA GAAGCGATAT ATATATATAT
ATATATATTG ATTCCTTGAA GGAGAAAGTG AAAGAAGAGA GATGGGTGTG ACGAAGGAAA ACGTTGAAGC ATCCTTGAAG
GCCAAACTCA ACCCTTCTCA TCTTGAAGTG GTTGATACAT CTGGAGGGTG CGGCGCTAGT TTTGTAGTGG AGATTGTATC
AGAACAATTT GAAGGAAAAA GGCTACTGGA GAGGCATCGA ATGGTGAATG CTGCCTTAGA GGAGGAACTG AAAGAGATTC
ATGCTCTCTC GATAAAGAAA ACTGTTACCC CAGAGCAGTG GAAACAACAG CAAGAAGCCA ACCAATCAAA TGCTGCTGCC
TAGATCATAT GTTTCGGTTA TAATCATTTA TAAATAAGAA ATCCAGTGTG TTACTGACTT TTGACAATGT TTATGGATTT
TAGCTCTCTG TACTTTTATC GACACTCAAA TTTGTAGCTG TAGTACTAAA GTCAAGTTTA CAAAATTTCT TCCTTTCCCC
TAGTTATTAA GTAACGTGAC CCTCTTTGGG TAGAAACTTT TACATCAACT ACACTTTGTT GAGCGACCCC CTTCAAGTAG
AAACTTTGAA ATCAATTGTA GTCGTAAAAC ACCCA

>Vigan.01G076300.01
ATGGGTGTGA CGAAGGAAAA CGTTGAAGCA TCCTTGAAGG CCAAACTCAA CCCTTCTCAT CTTGAAGTGG TTGATACATC
TGGAGGGTGC GGCGCTAGTT TTGTAGTGGA GATTGTATCA GAACAATTTG AAGGAAAAAG GCTACTGGAG AGGCATCGAA
TGGTGAATGC TGCCTTAGAG GAGGAACTGA AAGAGATTCA TGCTCTCTCG ATAAAGAAAA CTGTTACCCC AGAGCAGTGG
AAACAACAGC AAGAAGCCAA CCAATCAAAT GCTGCTGCCT AG

>Vigan.01G076300.01
MGVTKENVEA SLKAKLNPSH LEVVDTSGGC GASFVVEIVS EQFEGKRLLE RHRMVNAALE EELKEIHALS IKKTVTPEQW
KQQQEANQSN AAA*