GBrowse Details

Vigan.01G070100.01

Basic Information:
Name: Vigan.01G070100.01
Multiple alignment
Variant Information
Position: Chr01:5625351..5630494 (+ strand)
Length: 5144
Functional Information:
Description: Similar to PAD4. [D2DF32, Glycine max]
GO: Biological Process: lipid metabolic process (GO:0006629)
Molecular Function: triglyceride lipase activity (GO:0004806)
InterPro: Lipase, class 3 (IPR002921)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:19.63,11.01,14.48,16.11,12.28,8.56,40.25,12.15
Structure :
Position: Chr01:5625351..5625474 (+ strand)
Length: 124
Type: five_prime_UTR
Position: Chr01:5625475..5625503 (+ strand)
Length: 29
Type: CDS
Position: Chr01:5625633..5625957 (+ strand)
Length: 325
Type: CDS
Position: Chr01:5628224..5628946 (+ strand)
Length: 723
Type: CDS
Position: Chr01:5629347..5630177 (+ strand)
Length: 831
Type: CDS
Position: Chr01:5630178..5630494 (+ strand)
Length: 317
Type: three_prime_UTR

>Vigan.01G070100.01 class=Sequence position=Chr01:5625351..5630494 (+ strand)
GCAATATTCA AAGGAATGTA AAAGGTAGCA ATTCAAGGTG TTCTTCATTC AAACTTCTCC AAATTCCAGT CTCCGCAAGA
CTCCAACGTA ACGTAAGAAA CATCGAAGAA AAAACCATTA TTCCATGGGC ATGGCTTCCA ACGAACCTTC ACCGTAAGTA
CTCACTCTTA ACTTTTCCAA AAAAAAGAAA TTAAAAAAAA AAGCCAAAGG AGAATAATCA AAACTTAAAA TACTTTCCGA
GAAAAGTCGA AGCAATTCAG TCCCATGATT TACCCGTGAC AGGTTCGAGT CTCGCCAGAT GCTCGCCTCC TTCATTTCTT
CCACGCCGCT TCTCTCCGAC TCATGGCGAC TCTGCACCCA GGCCAACGCC GCCCCCTTCC GCACCTTCGT GGCGGACCGC
GTCGGCGCCT CCGTCTACGT CGCCTTCTCT GGCGTCCAGA TGCCCGGCTC CTCCGACCCC AACTCCAGGG ACTTGGTGCC
GCTCGACAGC ATCGGCGGCG TGCCCCTGTT TTCGCCGCGG CGGAGCAAGG AGCCGGACGA GCCCGTCATG GTTCACGCCG
CCATGCTCAA CCTCTTCCTT TCCCTTTTCA ATTCCTTCCA GAACCAGGTT CGTTTTCATC TTCTCAATTC ATACTTGTTT
CAATCGAAGA TAAATTCTCA CATAATTCGG ATGAACACGA ACTTGTTTAA TTGCTTTTTA CACTTCATTT ATATCGATCA
CAATTAATTG AAGTTTTATC TGTTAACTGT AGGTGAAAAT ATAGCTTTCT TCTTACCTGC TAAAACTGTC AACTATTTTC
TTTCATTTTC ATTTTATTTA CCAAAAATAG AAGAACGGGG TGTCACTGTT TCCCTATAAC TTTGAGATCT TTAATACAGT
TCATTAACTA ATAAGAAACG AAAACCCGAA TTGAAATTTT GTCGATTATA ATTTTGGCTG AGTTGAGTAT GTTGTTCGAG
TTAATTAATA ATTACCTTTA ACCAATTATA TAAATGTCAG CATCTTTTTA TGTGCATTTG TTGAGGTTTG ATGTATCCTT
ATATAGTTTG AGTAAATTTT ATGAGTTTTG ATTTTGAGAA ATGGGAAGAT TGTTGCTGCA AATTTTTTTT TTTTTATTAT
TTGGGTTGCT TCTTTTATTA TCATATGGTT ACACATGACG TAGCTGGTGG GGATGTTAAT TTTGGCTCAT CAATTGGTAG
AACATATAAA GAGAAAAAGA AAAAAGTGAA TGGTAATAAT TGATTTAAAA TTAGAGAAAA AGGGAAAAGG TTGAAAGGGA
CAGTAATTAG GTAGATGAAC TCGATATCCA TTCCATGGCG TTTTCGGGCT TTCTTTGTTA GAGTTAGAGA AGACGTGATA
ACGAATGAAG GCTGAGAAAA AAAAAGGGAA GTTACGTGTT GAAATACTAA TACCTAATTT AATTTATTAA AATTTCAACT
CAAAAGAGAT AGAAGATACC ACTGAGATTT AAGCTAATCT TAGAATAAGT TATTAACATT AAGAATATAA AAACAATAAA
TTACGCTGTT TTCTTATAGA AACATTAATT ATTTAAACAT TAAATCCCTT TATTAAAAGT GCACTAACTC TTTTAAGAAT
CCACCTCCAC TAAATCTCTT CAAATCAACA ATGGGTCGTG TTATTTTTAA CTCGTTGGTA TATGCTAATA ATATTCCCAC
ACCCAAAGTA TGTCCACGTT TATTTTTCTG TACATATTTA TTAATTTCTA AATTCCATGG CGTTCATTAG TCCTTTAATC
TATTTTATGG CCAGTTTTTA TAATAAATTT TATGAAAAGT TGAAAGAGAG AAGCAAAATA CATTTTTGCA ATGTGAAAGG
TCCCCTACAA CCTCTTATTC TGACATGGGT CCCACCAATG AGCAATCATT TTATCCGACG ACGGCTAACA ACCAAGCCAC
CTTGATCAGT GCCTGAAACA TTTGATGTAA TAACGAAAAC AAAACATCGG TTCGATTCGA GATTGTAAAA TAAAATGGTT
GACTTTTACT TTTTGGTAAC AGTTGCGTCC ATCTACAAGC AAATTATGGC ATAGAAAAGG CGTGTGGGTT GAATTTTCAG
CGTAAAATAA GCGAGTAAAA CTTCCATTAC GCTCGTTCAA TGCCTTCATC ATTATTATAT TAGGGTTAGT AGGGTTTTTG
TTCATGGACA AACATCTGTG ACAAATTTGT CTTCATCACC ACTAATTGAC CGGTAAAATG TTTCCGTACA GATAAATTTT
TGTATCCTCA GGTAGCATTT TATTTGTTAG TTTCTTTGGA AAAACAGTCT ATGTAAACTG TCTGAAAGGT CTATAAAAAT
AAGAAAATGA AAAATATATT TGGATAATAT CTACGAGGAA ATATTCTCTC TGAAACTGAC ACGTGTCTCA GTGATTTGGG
TAGGTTAAAC CCAACTTTTC TTACCATGGT GGTTTTCGAG TCATAGTTAT CACAGCAGAA TAATTAAGTT AACTTTCTAC
TTTTATGCCA AAGTCGGGGA GCAAGAACAC AAGACTTGAG TCTTGGCGTG TGGTGGGAGC TCTTGACTCT AACAACCCCA
TGGACCTTGC GAAATTGAAC AAAAAGTCAA TTTTGGAACT GTTCTTTTCA CATACAAAGC AAAAGGTTTC ATTTTCACAG
ATTATGCCCT ACGAACCGTC ACTTCAAGTC TTGCCAAGTC TTTTTAGCGT AATTTTTGGA GTTACCTTTT ATTTTTCTTT
TTCTGATTGT GCATACAACT AGATGAAGTT AAAAGTAAAA ATATTCATAT CAATATCCTT AAAGGGCATT TAATTTTTTG
TTCTTCAAAC TTATTTCCCC AGAATCTTAT TGGTATTCTT AACTAACTGC TAAAATTTAA TGTTGCAACT CAGATGTTGG
AAATAGTGGG AAACAAAGAC ACTAAATCAA TTGTGATCAC TGGACATTCA ATTGGAGGAG CCACTGCGTC GTTGTGCAGT
CTTTGGCTTC TGTCTTACCT ACAATCAATC TCTTCCTCTG TGTCAATATT GTGCATCACT TTTGGGGCAC CATTGCTTGG
GAACGAAGCC TTTTCTCAAA GCATTTTTAG AGAAAGATGG GGCGGCAACT TCTGCCACGT TGTGTCAAAG CATGACATAA
TGCCAAGGTT GCTCTTTGCC CCTATAACCT TTCTCACTAC TCAGCTAAAT TCCCTGCTAC AGTTTTGGCA ATTTTCCATG
ACCTCAGAAG ATTTTGGAAA GCTTGCAAAT CAGATATCAG AAAAAGAGAA AGCTAAATTG TTCGATGCTG TGATGGATTA
CTTGGAAGCA GCATCACAGG AGGGAGAAAC ATTTGTGCCT ATCTTGTTTC ACCCTTTCGG GAACTACTTT TTTGTCACAG
AAGAAGGAGC AGTGTGTGTA GATAGTCCAT CTGCAATCAT AAAGATGATG CACTTGATGC TTGCAACTGG TTCTCCAGTT
AGTAGTATTG AAGACCATCT GAAGTATGGA TACTATGTTA ATAAATTGTC TTCACAGACA TTGAATCAGG AAATTTCCAT
GCAGAGAACC ATTCCTGACT CGAGCTATGA AGCAGGGCTT GAATTAGCCA TCCAGTCTTC TGGCATAGCA AACGAGGTAA
TTGCAAAATC TTTTAGAGAT GTTATGCTAA AGGATTCATG TGTGTAACTA ACATTTAAAG CTTTCGGTTC ATAGATTCAG
ATTCTATATA ATTCAGTGCT AGGTGGGACT AAACATTATC AACTAAACAG CTTAAACTTT TAGATAGGTG GATAATGATA
ATATGCTGTC TCTTCTTAAA CCTTGAATTA TCAAAATCCA ATCTGTTTTC ACAAAGTCTC TGTGAAGTTG AAGATTTAAG
TGTTTATGGC TTACGATTTG AAGAACTAAA GTGGGAGGGT TTACTCTATT GGAAAATCAG CATCTATGAT TTTTGCAGCG
CCTTCTCATT ACGTAGTTAT ATTGGTCAGG CATGAATATT TTTGCTGAAC TAGTTATACT GTTATGTAAC CAACAGGAAT
CAGCTATCAC ATCCGCCAAG GAATGTCTCA AGAAAACAAG AAGAATGGGC CCTTCACCAA ATCTAAACGC AGCAACCCTA
GCAGTTAGCT TATCCAAGGT GGTACCTCTG AGAGCTCAAA TAGAATGGTA CAAGAATTGG TGCGATGAGC AAGACGACCA
AATTGGTTAC TACGACTCGT TCAAAAGCAG GGACTCTTCC AGTTCCAAAA GGGACATGAA AATCAACATT AACCGTTGCA
AGCTTGCCAG GTTTTGGAAC AACGTTATTG ACATGTTGGA AAGAGGTGAG CTGCCTCATG ACTTTGACAA GAGAGCCAAG
TGGGTCAATG CTTCACACTT CTATAAACTA TTGGTTGAGC CTCTAGACAT TGCTGAGTAT TATGGGAGGA AAGGGATGCA
TAGAGCCAAG GGGTATCATT ACATGCAGCA TGGTAGAGAG AGAAGATATG AGATTTTTGA TAGGTGGTGG AAGGACAGAA
CTGTTACTAC TGCTGCAGAA GAAAACAAGG AGAGGAGCAA GTTTGCGAGT CTTACCCAAG ATTCATGCTT TTGGGCTAGA
GTGGAAGAAG CTAGGGACTG GTTGAATTGT GTTAGAAGCG AGATAGACGC TAACAAGCTG TCTCTTTTAT GGGATAAAAT
TGAAAATTTT GAGAAGTATG CCATAAATTT AGTAGAAAAT AAAGAGGTGT CTTGTGATGT TCTCTTAAAG AACTCAAGTT
ACAGTATATG GGTGGAGGAT TTAAGAGAAC TGAAACAACT GAAAGTAAAG GTGCAAAGGC TTCCTCATCA GTTTACTGGT
TTTCTAGATG GTGAAGTAGT TCCTTAGTAG GTGATTTGGA ATCAATAAGT TTGACTCGTT GTAACTGTAC TATGTATAAG
AACTGTGCTA CCTTCTGCAA AATAACTCAT TTTGCTGTTG AGTTGTGACA CTTTTATTGC ATTAGGATTT CACTTGAATA
CATATACGAG AGCAGGGCTA AAGTGAAACA TTCAAAGGTT GATGACGATC ACATAACATT ATATCAGATT CTATATTACT
AACACCAAAA CTGAAACTAA AAGTTAAACA ATGACTAACA TTAATAGTAG TTGCCATGGT TGTCACTACA AGTTTGTAGC
ATGATTGATG TTCTCTAATA TTAG

>Vigan.01G070100.01
GCAATATTCA AAGGAATGTA AAAGGTAGCA ATTCAAGGTG TTCTTCATTC AAACTTCTCC AAATTCCAGT CTCCGCAAGA
CTCCAACGTA ACGTAAGAAA CATCGAAGAA AAAACCATTA TTCCATGGGC ATGGCTTCCA ACGAACCTTC ACCGTTCGAG
TCTCGCCAGA TGCTCGCCTC CTTCATTTCT TCCACGCCGC TTCTCTCCGA CTCATGGCGA CTCTGCACCC AGGCCAACGC
CGCCCCCTTC CGCACCTTCG TGGCGGACCG CGTCGGCGCC TCCGTCTACG TCGCCTTCTC TGGCGTCCAG ATGCCCGGCT
CCTCCGACCC CAACTCCAGG GACTTGGTGC CGCTCGACAG CATCGGCGGC GTGCCCCTGT TTTCGCCGCG GCGGAGCAAG
GAGCCGGACG AGCCCGTCAT GGTTCACGCC GCCATGCTCA ACCTCTTCCT TTCCCTTTTC AATTCCTTCC AGAACCAGAT
GTTGGAAATA GTGGGAAACA AAGACACTAA ATCAATTGTG ATCACTGGAC ATTCAATTGG AGGAGCCACT GCGTCGTTGT
GCAGTCTTTG GCTTCTGTCT TACCTACAAT CAATCTCTTC CTCTGTGTCA ATATTGTGCA TCACTTTTGG GGCACCATTG
CTTGGGAACG AAGCCTTTTC TCAAAGCATT TTTAGAGAAA GATGGGGCGG CAACTTCTGC CACGTTGTGT CAAAGCATGA
CATAATGCCA AGGTTGCTCT TTGCCCCTAT AACCTTTCTC ACTACTCAGC TAAATTCCCT GCTACAGTTT TGGCAATTTT
CCATGACCTC AGAAGATTTT GGAAAGCTTG CAAATCAGAT ATCAGAAAAA GAGAAAGCTA AATTGTTCGA TGCTGTGATG
GATTACTTGG AAGCAGCATC ACAGGAGGGA GAAACATTTG TGCCTATCTT GTTTCACCCT TTCGGGAACT ACTTTTTTGT
CACAGAAGAA GGAGCAGTGT GTGTAGATAG TCCATCTGCA ATCATAAAGA TGATGCACTT GATGCTTGCA ACTGGTTCTC
CAGTTAGTAG TATTGAAGAC CATCTGAAGT ATGGATACTA TGTTAATAAA TTGTCTTCAC AGACATTGAA TCAGGAAATT
TCCATGCAGA GAACCATTCC TGACTCGAGC TATGAAGCAG GGCTTGAATT AGCCATCCAG TCTTCTGGCA TAGCAAACGA
GGAATCAGCT ATCACATCCG CCAAGGAATG TCTCAAGAAA ACAAGAAGAA TGGGCCCTTC ACCAAATCTA AACGCAGCAA
CCCTAGCAGT TAGCTTATCC AAGGTGGTAC CTCTGAGAGC TCAAATAGAA TGGTACAAGA ATTGGTGCGA TGAGCAAGAC
GACCAAATTG GTTACTACGA CTCGTTCAAA AGCAGGGACT CTTCCAGTTC CAAAAGGGAC ATGAAAATCA ACATTAACCG
TTGCAAGCTT GCCAGGTTTT GGAACAACGT TATTGACATG TTGGAAAGAG GTGAGCTGCC TCATGACTTT GACAAGAGAG
CCAAGTGGGT CAATGCTTCA CACTTCTATA AACTATTGGT TGAGCCTCTA GACATTGCTG AGTATTATGG GAGGAAAGGG
ATGCATAGAG CCAAGGGGTA TCATTACATG CAGCATGGTA GAGAGAGAAG ATATGAGATT TTTGATAGGT GGTGGAAGGA
CAGAACTGTT ACTACTGCTG CAGAAGAAAA CAAGGAGAGG AGCAAGTTTG CGAGTCTTAC CCAAGATTCA TGCTTTTGGG
CTAGAGTGGA AGAAGCTAGG GACTGGTTGA ATTGTGTTAG AAGCGAGATA GACGCTAACA AGCTGTCTCT TTTATGGGAT
AAAATTGAAA ATTTTGAGAA GTATGCCATA AATTTAGTAG AAAATAAAGA GGTGTCTTGT GATGTTCTCT TAAAGAACTC
AAGTTACAGT ATATGGGTGG AGGATTTAAG AGAACTGAAA CAACTGAAAG TAAAGGTGCA AAGGCTTCCT CATCAGTTTA
CTGGTTTTCT AGATGGTGAA GTAGTTCCTT AGTAGGTGAT TTGGAATCAA TAAGTTTGAC TCGTTGTAAC TGTACTATGT
ATAAGAACTG TGCTACCTTC TGCAAAATAA CTCATTTTGC TGTTGAGTTG TGACACTTTT ATTGCATTAG GATTTCACTT
GAATACATAT ACGAGAGCAG GGCTAAAGTG AAACATTCAA AGGTTGATGA CGATCACATA ACATTATATC AGATTCTATA
TTACTAACAC CAAAACTGAA ACTAAAAGTT AAACAATGAC TAACATTAAT AGTAGTTGCC ATGGTTGTCA CTACAAGTTT
GTAGCATGAT TGATGTTCTC TAATATTAG

>Vigan.01G070100.01
ATGGGCATGG CTTCCAACGA ACCTTCACCG TTCGAGTCTC GCCAGATGCT CGCCTCCTTC ATTTCTTCCA CGCCGCTTCT
CTCCGACTCA TGGCGACTCT GCACCCAGGC CAACGCCGCC CCCTTCCGCA CCTTCGTGGC GGACCGCGTC GGCGCCTCCG
TCTACGTCGC CTTCTCTGGC GTCCAGATGC CCGGCTCCTC CGACCCCAAC TCCAGGGACT TGGTGCCGCT CGACAGCATC
GGCGGCGTGC CCCTGTTTTC GCCGCGGCGG AGCAAGGAGC CGGACGAGCC CGTCATGGTT CACGCCGCCA TGCTCAACCT
CTTCCTTTCC CTTTTCAATT CCTTCCAGAA CCAGATGTTG GAAATAGTGG GAAACAAAGA CACTAAATCA ATTGTGATCA
CTGGACATTC AATTGGAGGA GCCACTGCGT CGTTGTGCAG TCTTTGGCTT CTGTCTTACC TACAATCAAT CTCTTCCTCT
GTGTCAATAT TGTGCATCAC TTTTGGGGCA CCATTGCTTG GGAACGAAGC CTTTTCTCAA AGCATTTTTA GAGAAAGATG
GGGCGGCAAC TTCTGCCACG TTGTGTCAAA GCATGACATA ATGCCAAGGT TGCTCTTTGC CCCTATAACC TTTCTCACTA
CTCAGCTAAA TTCCCTGCTA CAGTTTTGGC AATTTTCCAT GACCTCAGAA GATTTTGGAA AGCTTGCAAA TCAGATATCA
GAAAAAGAGA AAGCTAAATT GTTCGATGCT GTGATGGATT ACTTGGAAGC AGCATCACAG GAGGGAGAAA CATTTGTGCC
TATCTTGTTT CACCCTTTCG GGAACTACTT TTTTGTCACA GAAGAAGGAG CAGTGTGTGT AGATAGTCCA TCTGCAATCA
TAAAGATGAT GCACTTGATG CTTGCAACTG GTTCTCCAGT TAGTAGTATT GAAGACCATC TGAAGTATGG ATACTATGTT
AATAAATTGT CTTCACAGAC ATTGAATCAG GAAATTTCCA TGCAGAGAAC CATTCCTGAC TCGAGCTATG AAGCAGGGCT
TGAATTAGCC ATCCAGTCTT CTGGCATAGC AAACGAGGAA TCAGCTATCA CATCCGCCAA GGAATGTCTC AAGAAAACAA
GAAGAATGGG CCCTTCACCA AATCTAAACG CAGCAACCCT AGCAGTTAGC TTATCCAAGG TGGTACCTCT GAGAGCTCAA
ATAGAATGGT ACAAGAATTG GTGCGATGAG CAAGACGACC AAATTGGTTA CTACGACTCG TTCAAAAGCA GGGACTCTTC
CAGTTCCAAA AGGGACATGA AAATCAACAT TAACCGTTGC AAGCTTGCCA GGTTTTGGAA CAACGTTATT GACATGTTGG
AAAGAGGTGA GCTGCCTCAT GACTTTGACA AGAGAGCCAA GTGGGTCAAT GCTTCACACT TCTATAAACT ATTGGTTGAG
CCTCTAGACA TTGCTGAGTA TTATGGGAGG AAAGGGATGC ATAGAGCCAA GGGGTATCAT TACATGCAGC ATGGTAGAGA
GAGAAGATAT GAGATTTTTG ATAGGTGGTG GAAGGACAGA ACTGTTACTA CTGCTGCAGA AGAAAACAAG GAGAGGAGCA
AGTTTGCGAG TCTTACCCAA GATTCATGCT TTTGGGCTAG AGTGGAAGAA GCTAGGGACT GGTTGAATTG TGTTAGAAGC
GAGATAGACG CTAACAAGCT GTCTCTTTTA TGGGATAAAA TTGAAAATTT TGAGAAGTAT GCCATAAATT TAGTAGAAAA
TAAAGAGGTG TCTTGTGATG TTCTCTTAAA GAACTCAAGT TACAGTATAT GGGTGGAGGA TTTAAGAGAA CTGAAACAAC
TGAAAGTAAA GGTGCAAAGG CTTCCTCATC AGTTTACTGG TTTTCTAGAT GGTGAAGTAG TTCCTTAG

>Vigan.01G070100.01
MGMASNEPSP FESRQMLASF ISSTPLLSDS WRLCTQANAA PFRTFVADRV GASVYVAFSG VQMPGSSDPN SRDLVPLDSI
GGVPLFSPRR SKEPDEPVMV HAAMLNLFLS LFNSFQNQML EIVGNKDTKS IVITGHSIGG ATASLCSLWL LSYLQSISSS
VSILCITFGA PLLGNEAFSQ SIFRERWGGN FCHVVSKHDI MPRLLFAPIT FLTTQLNSLL QFWQFSMTSE DFGKLANQIS
EKEKAKLFDA VMDYLEAASQ EGETFVPILF HPFGNYFFVT EEGAVCVDSP SAIIKMMHLM LATGSPVSSI EDHLKYGYYV
NKLSSQTLNQ EISMQRTIPD SSYEAGLELA IQSSGIANEE SAITSAKECL KKTRRMGPSP NLNAATLAVS LSKVVPLRAQ
IEWYKNWCDE QDDQIGYYDS FKSRDSSSSK RDMKININRC KLARFWNNVI DMLERGELPH DFDKRAKWVN ASHFYKLLVE
PLDIAEYYGR KGMHRAKGYH YMQHGRERRY EIFDRWWKDR TVTTAAEENK ERSKFASLTQ DSCFWARVEE ARDWLNCVRS
EIDANKLSLL WDKIENFEKY AINLVENKEV SCDVLLKNSS YSIWVEDLRE LKQLKVKVQR LPHQFTGFLD GEVVP*