GBrowse Details

Vigan.01G035900.01

Basic Information:
Name: Vigan.01G035900.01
Multiple alignment
Variant Information
Position: Chr01:2499625..2503539 (- strand)
Length: 3915
Functional Information:
Description: Similar to Uncharacterized protein. [W9QUK0, Morus notabilis.]
GO: Biological Process: ATP synthesis coupled proton transport (GO:0015986)
Cellular Component: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) (GO:0000276)
Molecular Function: hydrogen ion transmembrane transporter activity (GO:0015078)
InterPro: ATPase, F0 complex, subunit G, mitochondrial (IPR006808)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:14.34,22.05,44.16,25.49,69.08,66.42,43.88,30.34
Arabidopsis thaliana homolog: AT4G29480.1
Automatic updates:
Name: NM_001248462 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306205 (LOC100306205), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001249047 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499783 (LOC100499783), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:2499625..2499968 (- strand)
Length: 344
Type: three_prime_UTR
Position: Chr01:2499969..2500155 (- strand)
Length: 187
Type: CDS
Position: Chr01:2502752..2502933 (- strand)
Length: 182
Type: CDS
Position: Chr01:2502934..2503539 (- strand)
Length: 606
Type: five_prime_UTR

>Vigan.01G035900.01 class=Sequence position=Chr01:2499625..2503539 (- strand)
TATTCTCATT TCTGATTTCT GTATTCACCT CAGATACTAT GATTCATCCA CCCTTTGTCT TTTTCATTTT CCCTGCAGAT
CTCGTTCTCT CCTCTTCCCG ATCTTCTTCT CTCACACTAT CATCTCTTTC ATTTTCAATA GTTACTTCAG TTGCGTTTTG
TTTTTGCTTA TATTGCCTAA TTTTATTTAT TTTTTATTTA TTTATGTGGT TGTAGTGTGA AATGGTTGAT AATTTTGGTT
CTGACATGAC ACCTAGAACC CTATTTTATT TATTTAATTG AAGTTCTTTT CATTTGATAT CAATGCATAA CTCCATCTTA
ATCCCTTTTT AGTTACTCAT AAAACATCAC CTGCTAAGCC AATGTAGAAA TGAAATGGAT GAGGTAGCAA CTGTTAGTGT
CGAAGGCCGA GATGTGTTCT AGATGTTGCT TTAAGAATAT GCCTTTAGCT GTTAATTTTC TTTTTGTTCT GACTATTGTC
AATGTGAGCT GAAGAAATTA TGATAGTTTG ATAAACTTCT GCTTAAACAC TTTTTGACTC TGTCTTATTC TAATATGATC
TTTCCCCTTT GGTCTAGGGT TTTGTTGTAC CTAGTTTGCA GACTTGATGG CGTCAAAGTT GCACCAGTTG CAGTCCAAAG
CATGTCAAGC ATCTCAATTT GTAGCCAAAC ATGGATCTAA CTACTACAGG CAATTGTTGG AACAGAATAA GCAATACATT
CAGGAGCCTC CGACTGTAGA AAAATGCAAC CTGCTATCGA AACAATTGTT CTACACCCGC CTTGCAAGGT TATATGTTCT
CCAACTCCCC CTTTCCCCTC AAATAATGTG TATGGATGGA TTTATTGTGT GAAAATTTCT AATTGTCTTT TTTTGATTGC
AAATTGTCTT TTGGAAACTT TAAAACAAAT GGATGCTTCT AGTCTTTTCT ATTGGCCATA GACCAGAGAA GTCTGTATGA
ATGATGTGGA TGCAAGGCTT TAACATACTT TGTACTGCTG TATTATGTTG GCTTGTCCCT CTTTCGCCAG AGTTTCTTAT
TGACTGAGAT ATAAACTTTC AGTCATCAAT CCCCTAAATT ACATCAAATA TCCATGTTGG GATATCCATG TTTGGGATAT
CGACTATTTT TATGATGGCT AACACTATTT CTGCTTTACC TGGATTTGGA ACTGGCTGTG AGACCAAAGT TCTAGTTAAT
GTCTCAAAGT TGTATATGGG AAAGTCTTCT ATTCTCTTCT GATTTATAAA GTAAGTAAAT GGGTCCTCCT TCATGTCCTT
GATCGTGGGA GATGTTATGG AATGGGAGAT TGTTTTCATT TTGATGGTAA AGGGATAAAA CAGATTCTTG TTCATATTTG
TTACAAACAA CAGTCTGATG TGGTTCCTAT GCAATGATGT CAAACTCAAG GATCCCAAGA GGATTTGAGG GAGTATTGTA
ACTCAACTCA TAAGAGTTTC AAGTCTATGA AAAACTATAT TCATATATCC ATGCATGCAT TAAAAAGAAT ATAGGCAATA
TAACAACACA TAATAAGTCT TAAGTATTAA GATTCAATAC ATAACAACTA TAAATAGGTT CACAATTCAT AAAATTACAC
TATTGCAAGA GCAAAGGAAA GTATTAAGGA AACAATACAA AGCAGACTGC CAAGGACGAA GGCAGCATTG GTGACAATGG
TTGTGAGTGC TGTGATGGCC ATCAATGGTG AAGCTAGCAT CAATTGGAAG GTACAGTGCT TCAATTGTTA TTGATGACAG
TTGTTTGACA ACAATGTCAG TCTCAAAGTG CGCACACTGT TGAGAGTAGT TTATTTCTCT TCTGATTTGT GAATGGGTGG
GAACCCTAGC AGAACAAAAG GGCCATGCGA ATTGGACTTC TATTTTTGGT TGGGTCGAGT CTTTCAGCCA ACAAATGGGC
CATTTTAACT CTCAAACCTC ATCTGCTCAA ACAAATTGGA CCAATGTGAT GCACCTCATG ATTTCATGAG CAACTGAGTG
ATCCGGCTAC AGTCCACACC TCTTCTGATC CTCGTGTGCA TCAGCTTGCT GCATCCCCCA AACTTGTAGG ATCACACGAG
TATCCAAGTA TACTTGTGAT TTTAACAATG TTGCCACTGT AGACTTATTA AGGGTTCAGG CTATAATTTA GCAATTCTTC
TTCTAAAATA TGCTGAGCCA AACACACTAA ATACGTTAGC CCATCCATTA ATTGGCCTTA TATTGGGAAA GTTCACCTGG
TATGTGGCAT GAAAGGTTGA TTGTAACCAG GGACATGAGT CAGGGGAGAA GGGCAAAATT GGCACTTGAA AAATGAAGTG
GACTCTATAA ACGAACAGGT GATCATGTAA TTAACATTAA TCCTTTCTTG GAACTGAAGT TTAGTTTGAT TCAGCCCACG
AATCTGTTCA TACCATAGAC TCTAGAATTA GTATTGGACG TATTGGAGAC AAGTGTTTGC GTGGAAGAGT CCATGGACAG
AATTTAGTGT AATCAAAGTT CTGATCTGGT GTTGGAAAGA AATGCCAGAA ATATATTCTG TGTATGCTTT AGTGAATATT
GTTATGGATG CTTTAGAAGT ACAAACTAAA ATCCTGTAGG ACTCTAGAAC CAACCGGACT CTTAAGTCTT TAGATACCAT
GTTATTTACT TTTGACTAAC TTTTGGACTT CCTATAATAA CCTGAATCCC TAATTTCTGA CTTTCATGGG CTTCATTTGC
TTGCCAGATA TACCAAACTA TAGCTCTTTG CATCACTATG CGTGTACAAT TAGCATTGAA CATAATACAT TAATTATTTA
TTACACTTTA AAAATTATTT ATCCACATCC AAGTAGCAAG ACATGCATAT ATTTGAAATT AAGTCTCGTT GCATCAAATA
ATTAATTTAA TTTTTCCTGT AATCCATCAT AGCATGGTTC AACTGTATGC ATTGAATTTA GCAGCTCATA ATGTGCTTTT
CATTATGAGA ACCTATAGTT TTAAGTCTAG AATTTCTTGT TAATTGGTGT AGTCATCGTG TTTACAATTC TGATATAAAA
TAACCTTAGC TCTTCAATTT CTTCCCACAT CTGTTTGTAG TTTTTGTGCT GAAGCCCACT TCTGCTAGGT ACTACTGAGC
CAGTGCTGCC TCTCTATCTC TGTCATCTAT TTGTGAATGC CAATGCTTAT GTGGCTCACT TCAATATTGG TTTCAAATCT
GTCGTGTGTT TCTAATTATG CTAGTTTTCA TCACGATCTT CGGTGAATTA GCAAAACAAT GATATAATGA ACTCCGGAAA
CCTGTTCTGC ATACTGTATT GTCTCTATGT AGTAAAGTCT GTTGTATGCC AATTTAATTT TGGGTGCCCT CGCTGCTACA
TATAACTCTT CAAATCTTTT GCAGTATTCC GGGTCGTACA GAGTCATTCT GGAAGGAACT TGATTATGCC AAGAATTTGT
GGAAGAACAG GAAGGACCTA AAGGTGGAAG ATGCAGGTAT TGCTGCTTTG TTTGGCCTGG AATGCTTTGC ATGGTTTTGC
GCTGGTGAGA TTGTTGGAAG GGGATTTACT TTCACCGGTT ACTATGTCTG ACAAAAACCA CTTGAAAGTG TAGGTTTTAT
CAGTGCTTAT ATACTCTTAA AGCCAATTTC TCTGATCATT CATACATTGT GTGGATTATT CTACAAGGCA ATTTTTGTTA
TTCTGAATTA TTTTGTTTTG GGAGAAAGGT TGAAAAACTA GGGTTTAGTT TTCATAAGCC TCAATAACCC CTTGTAGTTG
AAAGCGGGGG GACGAAACAT GCGTTGTTCT CTTGTACTGT TGGAAAGCTA GTGATGGTAT TCCACAATGA TGAATTGATG
ATATACTCCT GCAAGTCTTT TAATTATTTT TGTCATGCTT TTTTATTTAA AAAAAAAGAT TTAATTAAGC TGGAA

>Vigan.01G035900.01
TATTCTCATT TCTGATTTCT GTATTCACCT CAGATACTAT GATTCATCCA CCCTTTGTCT TTTTCATTTT CCCTGCAGAT
CTCGTTCTCT CCTCTTCCCG ATCTTCTTCT CTCACACTAT CATCTCTTTC ATTTTCAATA GTTACTTCAG TTGCGTTTTG
TTTTTGCTTA TATTGCCTAA TTTTATTTAT TTTTTATTTA TTTATGTGGT TGTAGTGTGA AATGGTTGAT AATTTTGGTT
CTGACATGAC ACCTAGAACC CTATTTTATT TATTTAATTG AAGTTCTTTT CATTTGATAT CAATGCATAA CTCCATCTTA
ATCCCTTTTT AGTTACTCAT AAAACATCAC CTGCTAAGCC AATGTAGAAA TGAAATGGAT GAGGTAGCAA CTGTTAGTGT
CGAAGGCCGA GATGTGTTCT AGATGTTGCT TTAAGAATAT GCCTTTAGCT GTTAATTTTC TTTTTGTTCT GACTATTGTC
AATGTGAGCT GAAGAAATTA TGATAGTTTG ATAAACTTCT GCTTAAACAC TTTTTGACTC TGTCTTATTC TAATATGATC
TTTCCCCTTT GGTCTAGGGT TTTGTTGTAC CTAGTTTGCA GACTTGATGG CGTCAAAGTT GCACCAGTTG CAGTCCAAAG
CATGTCAAGC ATCTCAATTT GTAGCCAAAC ATGGATCTAA CTACTACAGG CAATTGTTGG AACAGAATAA GCAATACATT
CAGGAGCCTC CGACTGTAGA AAAATGCAAC CTGCTATCGA AACAATTGTT CTACACCCGC CTTGCAAGTA TTCCGGGTCG
TACAGAGTCA TTCTGGAAGG AACTTGATTA TGCCAAGAAT TTGTGGAAGA ACAGGAAGGA CCTAAAGGTG GAAGATGCAG
GTATTGCTGC TTTGTTTGGC CTGGAATGCT TTGCATGGTT TTGCGCTGGT GAGATTGTTG GAAGGGGATT TACTTTCACC
GGTTACTATG TCTGACAAAA ACCACTTGAA AGTGTAGGTT TTATCAGTGC TTATATACTC TTAAAGCCAA TTTCTCTGAT
CATTCATACA TTGTGTGGAT TATTCTACAA GGCAATTTTT GTTATTCTGA ATTATTTTGT TTTGGGAGAA AGGTTGAAAA
ACTAGGGTTT AGTTTTCATA AGCCTCAATA ACCCCTTGTA GTTGAAAGCG GGGGGACGAA ACATGCGTTG TTCTCTTGTA
CTGTTGGAAA GCTAGTGATG GTATTCCACA ATGATGAATT GATGATATAC TCCTGCAAGT CTTTTAATTA TTTTTGTCAT
GCTTTTTTAT TTAAAAAAAA AGATTTAATT AAGCTGGAA

>Vigan.01G035900.01
ATGGCGTCAA AGTTGCACCA GTTGCAGTCC AAAGCATGTC AAGCATCTCA ATTTGTAGCC AAACATGGAT CTAACTACTA
CAGGCAATTG TTGGAACAGA ATAAGCAATA CATTCAGGAG CCTCCGACTG TAGAAAAATG CAACCTGCTA TCGAAACAAT
TGTTCTACAC CCGCCTTGCA AGTATTCCGG GTCGTACAGA GTCATTCTGG AAGGAACTTG ATTATGCCAA GAATTTGTGG
AAGAACAGGA AGGACCTAAA GGTGGAAGAT GCAGGTATTG CTGCTTTGTT TGGCCTGGAA TGCTTTGCAT GGTTTTGCGC
TGGTGAGATT GTTGGAAGGG GATTTACTTT CACCGGTTAC TATGTCTGA

>Vigan.01G035900.01
MASKLHQLQS KACQASQFVA KHGSNYYRQL LEQNKQYIQE PPTVEKCNLL SKQLFYTRLA SIPGRTESFW KELDYAKNLW
KNRKDLKVED AGIAALFGLE CFAWFCAGEI VGRGFTFTGY YV*