GBrowse Details

Vigan.01G021500.01

Basic Information:
Name: Vigan.01G021500.01
Multiple alignment
Variant Information
Position: Chr01:1355799..1357655 (- strand)
Length: 1857
Functional Information:
Description: Similar to Uncharacterized protein. [I1KQ64, Glycine max]
GO: Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
InterPro: SANT/Myb domain (IPR001005)
Homeodomain-like (IPR009057)
Myb domain (IPR017930)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:9.84,0.63,33.06,5.92,4.61,2.73,0.64, 3.11
Automatic updates:
Name: NM_001248908 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max MYB transcription factor MYB184 (MYB184), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:1355799..1356061 (- strand)
Length: 263
Type: three_prime_UTR
Position: Chr01:1356062..1356728 (- strand)
Length: 667
Type: CDS
Position: Chr01:1356990..1357119 (- strand)
Length: 130
Type: CDS
Position: Chr01:1357213..1357360 (- strand)
Length: 148
Type: CDS
Position: Chr01:1357361..1357655 (- strand)
Length: 295
Type: five_prime_UTR

>Vigan.01G021500.01 class=Sequence position=Chr01:1355799..1357655 (- strand)
GTTTCCTGTG GCAAAGACTA CGGAAGGTGA ATGGAAGGTG TCGTAAGGAA TTTAGAGCAT GAGCATGCTC TTTCTTTTGG
AAAAGTATTA AAGTGTATAG TAATTCACTT TGACCTGAAT TCAACTCCCA AAATGGGATA CAGACATACA GTGTATAGTG
ATAGTATATT ATACACTATG CATCTTGCGT ATAACAATTT GCTTTGTAAT TCTGGTTTTT CCCTTGACCC TTTTAAAATC
CTTCTGCATA TATATGCTCA CATAGTGTTT ATAGTTTTAG TGGGTGAGAA TAGCCATGTC TACTTCAAAG AGCGTCAGCA
GTTCTAGCGA AGATGACAAT GAACTTAGAA GAGGGCCCTG GACTCTTGAA GAGGATAATT TGCTCTCCCA ATACATTTCT
GATCACGGGG AAGGCCGATG GAACTTGCTG GCTAAACGTT CAGGTAACTT GATAACAGCA TAATTAGAAG TTAAATGCAT
GAAAGAAACA CCACCCTGCT ATTTTTTATC AATTCCCTTT CCTTTATATG ACACAGGATT AAAGAGAACT GGAAAAAGTT
GCAGATTAAG GTGGCTAAAT TATCTAAAAC CAGATGTGAA ACGAGGAAAT TTAACCCCAC AAGAGCAACT TTTAATTCTT
GAACTCCACT CAAAGTGGGG AAACAGGTAT CTATCTATCT TCTGTGTCTG ATTCTTTAGC TTATGATTGC GGTTATGGTC
ATTATTTTAT TGTGAAAAAC TGTTCACAAA TTTGTCAATG CAATCTCCCC TGCATTTGTG TTATGGTACA AAAAATCTAG
TTGCGAAATT ACAATCATAA ATTTTTTTTA GAACTCGCCT CTAACAGTAG AAGCAAAGGA AATATTGCCA CTATCAGATG
CTTGTCTGCT ACATTTATCT GGATTTCTAT TTCTTTAATG ACTGTAGGTG GTCAAAAATT GCACAGCATT TGCCCGGAAG
AACAGACAAT GAGATCAAGA ACTATTGGAG AACAAGGATT CAGAAACAAG CCAGACATTT GAAAATTGAG ACTGACAGCA
GAGAATTTCA AGAGCTTGTA AGGCGTTTTT GGATGCCAAG ATTGCTTCAG AAGGTAAAAG AGTCATCGTC TTCTTCGGCC
ATGTCGATTC AGAATCAGGC AATTCCTTTG GTTCTTGATG ATGGTGTTTC TCAACAGTCA ACTATTGGGA CCATACCATG
GCAGGGAGCT TGCGTGAGTA TGAATGGAGG TAGTCCCACT TATATGGACC AACATGAGCA GAACTCAGAC TCTGAACACA
ACAGTGGTTC ATGCATCTCC TTTTCTGAGT CAGCAAATAT GCCAAAAGTG TCTCATCATT TTGGACACAC CATGGACCAA
TTCCATTCCC TAAGCAACAA TGACTTTGGC ACTTACTCAT ATGATCCTTA TCATGTAAAT GACAATGCAT ATGAGATGGA
GACCTTCAAA GCAGCAACTG CAAAGGTGGC TCAGGATGTG CAATACCCAA TTGCTGACTG TCAAACGGCA GGAACCGATT
GGCTAAGCAA CGATTTTGCA TGTACCATGT GGAACATCGA TGAACTGTGG CAGTTTAGCA AGTTACAAAA ATAAGATTTT
TAGGGTTTCT CATTTTTGGA ATAACCCAAA CACTGTCTTT GATGATGTTA TTGTGGATTA GCTACCAAAT TAATCAATTC
AGAGATGGTG ATTGTTTTCT GTACATCTGT CATGTCATGA ATTCCTCTGT TTAGATGATA GTGCTTTCTA ATTTGTATTC
ATTGAGATTG AATCCCTGAT TAGAGAAAGG TCAATAGTCA ATAGCTAGTG AAAACAAAAT AGTTAATTAA TGCTAAAAAA
AATTCGTGAA TATACAG

>Vigan.01G021500.01
GTTTCCTGTG GCAAAGACTA CGGAAGGTGA ATGGAAGGTG TCGTAAGGAA TTTAGAGCAT GAGCATGCTC TTTCTTTTGG
AAAAGTATTA AAGTGTATAG TAATTCACTT TGACCTGAAT TCAACTCCCA AAATGGGATA CAGACATACA GTGTATAGTG
ATAGTATATT ATACACTATG CATCTTGCGT ATAACAATTT GCTTTGTAAT TCTGGTTTTT CCCTTGACCC TTTTAAAATC
CTTCTGCATA TATATGCTCA CATAGTGTTT ATAGTTTTAG TGGGTGAGAA TAGCCATGTC TACTTCAAAG AGCGTCAGCA
GTTCTAGCGA AGATGACAAT GAACTTAGAA GAGGGCCCTG GACTCTTGAA GAGGATAATT TGCTCTCCCA ATACATTTCT
GATCACGGGG AAGGCCGATG GAACTTGCTG GCTAAACGTT CAGGATTAAA GAGAACTGGA AAAAGTTGCA GATTAAGGTG
GCTAAATTAT CTAAAACCAG ATGTGAAACG AGGAAATTTA ACCCCACAAG AGCAACTTTT AATTCTTGAA CTCCACTCAA
AGTGGGGAAA CAGGTGGTCA AAAATTGCAC AGCATTTGCC CGGAAGAACA GACAATGAGA TCAAGAACTA TTGGAGAACA
AGGATTCAGA AACAAGCCAG ACATTTGAAA ATTGAGACTG ACAGCAGAGA ATTTCAAGAG CTTGTAAGGC GTTTTTGGAT
GCCAAGATTG CTTCAGAAGG TAAAAGAGTC ATCGTCTTCT TCGGCCATGT CGATTCAGAA TCAGGCAATT CCTTTGGTTC
TTGATGATGG TGTTTCTCAA CAGTCAACTA TTGGGACCAT ACCATGGCAG GGAGCTTGCG TGAGTATGAA TGGAGGTAGT
CCCACTTATA TGGACCAACA TGAGCAGAAC TCAGACTCTG AACACAACAG TGGTTCATGC ATCTCCTTTT CTGAGTCAGC
AAATATGCCA AAAGTGTCTC ATCATTTTGG ACACACCATG GACCAATTCC ATTCCCTAAG CAACAATGAC TTTGGCACTT
ACTCATATGA TCCTTATCAT GTAAATGACA ATGCATATGA GATGGAGACC TTCAAAGCAG CAACTGCAAA GGTGGCTCAG
GATGTGCAAT ACCCAATTGC TGACTGTCAA ACGGCAGGAA CCGATTGGCT AAGCAACGAT TTTGCATGTA CCATGTGGAA
CATCGATGAA CTGTGGCAGT TTAGCAAGTT ACAAAAATAA GATTTTTAGG GTTTCTCATT TTTGGAATAA CCCAAACACT
GTCTTTGATG ATGTTATTGT GGATTAGCTA CCAAATTAAT CAATTCAGAG ATGGTGATTG TTTTCTGTAC ATCTGTCATG
TCATGAATTC CTCTGTTTAG ATGATAGTGC TTTCTAATTT GTATTCATTG AGATTGAATC CCTGATTAGA GAAAGGTCAA
TAGTCAATAG CTAGTGAAAA CAAAATAGTT AATTAATGCT AAAAAAAATT CGTGAATATA CAG

>Vigan.01G021500.01
ATGTCTACTT CAAAGAGCGT CAGCAGTTCT AGCGAAGATG ACAATGAACT TAGAAGAGGG CCCTGGACTC TTGAAGAGGA
TAATTTGCTC TCCCAATACA TTTCTGATCA CGGGGAAGGC CGATGGAACT TGCTGGCTAA ACGTTCAGGA TTAAAGAGAA
CTGGAAAAAG TTGCAGATTA AGGTGGCTAA ATTATCTAAA ACCAGATGTG AAACGAGGAA ATTTAACCCC ACAAGAGCAA
CTTTTAATTC TTGAACTCCA CTCAAAGTGG GGAAACAGGT GGTCAAAAAT TGCACAGCAT TTGCCCGGAA GAACAGACAA
TGAGATCAAG AACTATTGGA GAACAAGGAT TCAGAAACAA GCCAGACATT TGAAAATTGA GACTGACAGC AGAGAATTTC
AAGAGCTTGT AAGGCGTTTT TGGATGCCAA GATTGCTTCA GAAGGTAAAA GAGTCATCGT CTTCTTCGGC CATGTCGATT
CAGAATCAGG CAATTCCTTT GGTTCTTGAT GATGGTGTTT CTCAACAGTC AACTATTGGG ACCATACCAT GGCAGGGAGC
TTGCGTGAGT ATGAATGGAG GTAGTCCCAC TTATATGGAC CAACATGAGC AGAACTCAGA CTCTGAACAC AACAGTGGTT
CATGCATCTC CTTTTCTGAG TCAGCAAATA TGCCAAAAGT GTCTCATCAT TTTGGACACA CCATGGACCA ATTCCATTCC
CTAAGCAACA ATGACTTTGG CACTTACTCA TATGATCCTT ATCATGTAAA TGACAATGCA TATGAGATGG AGACCTTCAA
AGCAGCAACT GCAAAGGTGG CTCAGGATGT GCAATACCCA ATTGCTGACT GTCAAACGGC AGGAACCGAT TGGCTAAGCA
ACGATTTTGC ATGTACCATG TGGAACATCG ATGAACTGTG GCAGTTTAGC AAGTTACAAA AATAA

>Vigan.01G021500.01
MSTSKSVSSS SEDDNELRRG PWTLEEDNLL SQYISDHGEG RWNLLAKRSG LKRTGKSCRL RWLNYLKPDV KRGNLTPQEQ
LLILELHSKW GNRWSKIAQH LPGRTDNEIK NYWRTRIQKQ ARHLKIETDS REFQELVRRF WMPRLLQKVK ESSSSSAMSI
QNQAIPLVLD DGVSQQSTIG TIPWQGACVS MNGGSPTYMD QHEQNSDSEH NSGSCISFSE SANMPKVSHH FGHTMDQFHS
LSNNDFGTYS YDPYHVNDNA YEMETFKAAT AKVAQDVQYP IADCQTAGTD WLSNDFACTM WNIDELWQFS KLQK*