GBrowse Details

Vigan.01G014600.01

Basic Information:
Name: Vigan.01G014600.01
Multiple alignment
Variant Information
Position: Chr01:891434..894944 (- strand)
Length: 3511
Functional Information:
Description: Similar to Uncharacterized protein. [K7LSA3, Glycine max]
GO: Biological Process: protein folding (GO:0006457)
Cellular Component: prefoldin complex (GO:0016272)
Molecular Function: unfolded protein binding (GO:0051082)
InterPro: Prefoldin beta-like (IPR002777)
Prefoldin (IPR009053)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:95.83,53.08,33.15,45.61,57.08,58.94,47.87,35.78
Arabidopsis thaliana homolog: AT1G29990.1
Automatic updates:
Name: NM_001248831 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306488 (LOC100306488), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:891434..891678 (- strand)
Length: 245
Type: three_prime_UTR
Position: Chr01:891679..891735 (- strand)
Length: 57
Type: CDS
Position: Chr01:892232..892292 (- strand)
Length: 61
Type: CDS
Position: Chr01:894479..894603 (- strand)
Length: 125
Type: CDS
Position: Chr01:894686..894756 (- strand)
Length: 71
Type: CDS
Position: Chr01:894845..894920 (- strand)
Length: 76
Type: CDS
Position: Chr01:894921..894944 (- strand)
Length: 24
Type: five_prime_UTR

>Vigan.01G014600.01 class=Sequence position=Chr01:891434..894944 (- strand)
TGAAGGAAGA AGGTCGGAAA CACGATGAGT TCGTCCAACC TCAGAGATCT TCAACGTGAA TTGGAGAACA AAGCCAATGA
TCTCAGCAAG CTCCAGAAGG GTACGCTCAC TATTCCCCTT ATCTATTATT GTTCTATTTG TATTCACTCT TCTAATTCGT
GCCACGAATT TCCCATTTTT TTTTTCAGAA ATTGCGAAGA ATCACCAGAT GAGAAAGAAG TACACGATTC AGCTTGGCGA
GAACGAGCTC GTCCTCAAGG TACCGTAATC ATATATTTTT ATTTGTTCTC TGGCTCTTCC TGCTACGATG CCAACTGATT
ATATCTGTTC CTTTTGATAA GGAACTTGAT TTGTTGAAAG AAGACGCAAA TGTTTACAAG TTGATTGGGC CCGTACTTGT
TAAGCAAGAT TTGGCTGAGG CCAATGCAAA TGTCCGTAAG AGAATCGAAT ACATCTCTGC TGAATTGTAA GTTTGTGTTT
TCCCCCCGCC TATTTTTATG GGTATTGGGG TTTGTTACTT TTGGTTTCAA TTCATATGAT TAGCTTATCA TGGTTGTTTT
TAATTATTTA GTTAAAGTAC GTTGTTATCG TATGTCCCTT GTTATCGTAT GCCCCTTATT GTGAGGTGAA ACATAACCTA
GTTATTCCTG AGGGATACTA GTTAACACCT TGCTCTTACT TGGAAACTAT GCGTGAGTGT GACCATCTTG GGTCTCTTAA
AGAGTTTCTG ACCACTTTTT CCATTGCTTC CTATAGAAAA TGGAATGGTT TTTGTTTTCT ATTTTTATTT TTCAAAAGAT
ATGCTTATCA TCTGTGGTTG TGCATCTTAA TAGAAAATCA AGGAACTAAT TGGTGTCCAG TCAATAGGCT TGATTTTTAT
AAGTTTGCAA AAAAGGAGTA AATAAGTAAA CGTGAGGTAT CTGCTATTTA TATGAAGCTA TTAATATCAA GGACGGGTGA
ACTGACTAAA CAGCAAAGAA CACTCAAAAC AGCAAATGGT TCAAATATGA CTAAAAACAC AGCAATCAAG TGTATAAAAC
AGCAAAAAGA AGTATAAAAG CAACAAAAAT AGGTAGCTAT CAGCGATTGA AACTAAGCAA AAGTGCAAAA ATGAAACCAC
TCCTCCCACA CTTGACACAT TGTCCTCAAT GTGGAAGGGA AGCAATTTGG AAACAGCAAA GCAAGTACAG ATTTAAGCAT
AAAATGCAGA AAGAAAATTG TTCTGAGGTA ATGAAAAGGA AAATGAAAAA TTGGAATGAA AACTGAAGCT GAATTGCACT
ATTCTTCCAT CACTGGTTCT GTTATATGGA TCCTCTCCAG CCATTCCATG GAACTTTGGT AGCAACTGGA TCGTTTTTGG
CTTCAATTCA AAGTTGCAGC CCCTTGAACA TGTGGAGTCT GGAGAGGCTG GTAGCCTACA TCTGGGCTTG CCAGCTTCTC
TCAAGTTCTC TCTCACATTG CAGGTCTATG TCTCTCAGAT TAACTGGTTC TGGTTCAACA GGCTTGACAG TTCGGTCAAC
AGGTCCTGAC TCAAACTGGT TTTGAATTTT CACCTTTATC TCCCTTCTAG TCATCTCAAG CTCAGTGAAA TCTGTGTATT
GAACCTGGTC TGGACCTGGT CACACACTTA CAGAAAACAG TGACAGAAAT AGAACAGTGA TCATAGCAAA AACAGTGTAT
AACAGTGGCA GAAAAATATA GATTACTCCT ATCTAAAATG CTCAAACTGG AAAAACATAA AATTGGTAAC TCAAATGACT
ACTAAGTTTT TGTTTCCCCG GCAATGGTGC CAATTTGTTA AATCCCCAGT TGCATAGAGA TTTCCAACAT CGGAAATTCC
CCCTAATGTA GTAGAGTGGC AACCAGGTGT CAATCCAAGT AAACTCCAAC TTTAGTAGCT AATTTGTGTT ATGTTATCCA
TGAAAACTAA TGTAGACTCT GGGGGAAAAT GTAAAAGACA AAACTCCAAC ACAATGCAAG AAACTCAAGA AAAGAAATTA
AAAATATATA AAAAAATTAG AGAAACAAAA CTGTGACAGC AATGTATAGT GTAAAACATG AATAAAATGT TCAAATTTCT
ACTTACAAAG ACTAGAAATC TAACAATTGA AAAACTAAAC TAAAAATCTA CTTAAAAAAC ACCTTATTGA CACATTTTCA
CAAAATCACT AATTTTTACA AGAAAATCTG AAAATGAATT AAAATCAAAG AATTAAAACA AAAGAATACC AAAAAGAAGA
TCTTTTAACA ATAAAAAAAC ATGACAAAAT AGGGATTTGA CACTGCTTAA AATATCTAGG CACAAAATCG TATACTTTGA
ACAATAAGCC TATTTTGTTT TATTACAACT CTGTGTGTAG CTGGTTACAA GCCCAGACAA AACATCAGGC TTGTATTTGT
ATTAGGCAGG TAACAAACAT GCGCAAATAA ATTACCAAAT ATTTTATGAC ATGGATAGAT GCATTACCTC GTACTACATT
TATTCTCGAT GTCCTATTTT TCCCTCTCAT TTCTAGTACT GTTAAGTACT GCTTGCTTGT TTATGTTTTT TTGCCATCTT
TTCATTATAT GGCTGGGCTG GTTTTAGTAT TCTTAAGCTT TTTATAATTT TTATTTTTGT TATCACAAAT GTAAGTGTTC
TCTGTGTGAC AGGAAGCGGC TTGATGCCAC TGTTCAAGAT TTGGAAGAGA AGCAAAATAG CAAGAAAGAT ACGGTTTGTA
ACTTTAGCTT CTTTATTTTT ACCTTTCGTC TATGCCTGGA CATGTTTTTT GTCATTCCAT TTGATAGAAT TAGATGCAAG
TCTTGATATG TAAAACAATT TTATCTATAT TATATAATAT TGAAATTAAA AAAATTAATT GACTTTTGTT GAGAGTGGGA
TTTGAACCCA CGCCCTTTCG GACCAGAACC TTAATCTGGC GCCTTAGACC AACTCGGCCA TCTCAACTTT GTTTTTGTTT
AATGTAACAT GCATGTAACC ATCTAATTTC TGAACTTATT TTAAAATTGG TCATAAATAG TAATTATTAA CAAATATAAA
ATTGAAATTA AAAAAATTAA TTGACTTTTG TTGAGAGTGG GATTTGAACC CACGCCCTTT CGGACCAGAA CCTTAATCTG
GCGCCTTAGA CCAACTCGGC CATCTCAAAT TTATTTATTA ACATTGAGAG GGAAAAGAAA TGACTGATCT TCTTTTGTCA
TTGTTGCAGA TACTAAAATT GCAACAGAGG ATTCAATCTC TTCAGTCTGG GAAAGGAAAG GCATAATTTG CCCTAATATA
TTGTTTCAGC ATTGTAATTT AGGTGTGCTT AGCATTTGTA TTTTGAGCCT TTTCGTGGAC TGAAAGTTAA GTAGAAAGAA
AACCGTTTGG AGATTTGAGT GGATATTATA GTTGCTATTT TCAAAGTTTG TTTTATTAGA AGGTAATGAA AGAAAGATCT
ATTCTTCCCT ATAAAATGAA ATTAATTTAT ATAATTTTTG AAATTTTTGA ATTATGGTAA CTCTATAAAA T

>Vigan.01G014600.01
TGAAGGAAGA AGGTCGGAAA CACGATGAGT TCGTCCAACC TCAGAGATCT TCAACGTGAA TTGGAGAACA AAGCCAATGA
TCTCAGCAAG CTCCAGAAGG AAATTGCGAA GAATCACCAG ATGAGAAAGA AGTACACGAT TCAGCTTGGC GAGAACGAGC
TCGTCCTCAA GGAACTTGAT TTGTTGAAAG AAGACGCAAA TGTTTACAAG TTGATTGGGC CCGTACTTGT TAAGCAAGAT
TTGGCTGAGG CCAATGCAAA TGTCCGTAAG AGAATCGAAT ACATCTCTGC TGAATTGAAG CGGCTTGATG CCACTGTTCA
AGATTTGGAA GAGAAGCAAA ATAGCAAGAA AGATACGATA CTAAAATTGC AACAGAGGAT TCAATCTCTT CAGTCTGGGA
AAGGAAAGGC ATAATTTGCC CTAATATATT GTTTCAGCAT TGTAATTTAG GTGTGCTTAG CATTTGTATT TTGAGCCTTT
TCGTGGACTG AAAGTTAAGT AGAAAGAAAA CCGTTTGGAG ATTTGAGTGG ATATTATAGT TGCTATTTTC AAAGTTTGTT
TTATTAGAAG GTAATGAAAG AAAGATCTAT TCTTCCCTAT AAAATGAAAT TAATTTATAT AATTTTTGAA ATTTTTGAAT
TATGGTAACT CTATAAAAT

>Vigan.01G014600.01
ATGAGTTCGT CCAACCTCAG AGATCTTCAA CGTGAATTGG AGAACAAAGC CAATGATCTC AGCAAGCTCC AGAAGGAAAT
TGCGAAGAAT CACCAGATGA GAAAGAAGTA CACGATTCAG CTTGGCGAGA ACGAGCTCGT CCTCAAGGAA CTTGATTTGT
TGAAAGAAGA CGCAAATGTT TACAAGTTGA TTGGGCCCGT ACTTGTTAAG CAAGATTTGG CTGAGGCCAA TGCAAATGTC
CGTAAGAGAA TCGAATACAT CTCTGCTGAA TTGAAGCGGC TTGATGCCAC TGTTCAAGAT TTGGAAGAGA AGCAAAATAG
CAAGAAAGAT ACGATACTAA AATTGCAACA GAGGATTCAA TCTCTTCAGT CTGGGAAAGG AAAGGCATAA 

>Vigan.01G014600.01
MSSSNLRDLQ RELENKANDL SKLQKEIAKN HQMRKKYTIQ LGENELVLKE LDLLKEDANV YKLIGPVLVK QDLAEANANV
RKRIEYISAE LKRLDATVQD LEEKQNSKKD TILKLQQRIQ SLQSGKGKA*