Variant information

Chr11:22599200 - 22603207

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
22600205CG451772.771.00INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22601038GA501938.771.00INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22601303TG592268.771.00INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22601545TC481914.771.00INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22601904CT69366.770.20INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22601925CT74575.770.26INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22601978GA80726.770.31INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22601979TG80768.770.31INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22601990CA83818.770.30INTRON(|||None|Vigan.11G142400.01), SPLICE_SITE_REGION(|||None|Vigan.11G142400.01)Vigna nepalensis
22601998TA84972.770.33SYNONYMOUS_CODING(SILENT|atA/atT|I79|None|Vigan.11G142400.01)Vigna nepalensis
22602018TC861047.770.33NON_SYNONYMOUS_CODING(MISSENSE|Att/Gtt|I73V|None|Vigan.11G142400.01)Vigna nepalensis
22602020GA871005.770.33NON_SYNONYMOUS_CODING(MISSENSE|aCa/aTa|T72I|None|Vigan.11G142400.01)Vigna nepalensis
22602045GA911395.770.38STOP_GAINED(NONSENSE|Caa/Taa|Q64*|None|Vigan.11G142400.01)Vigna nepalensis
22602050CG901350.770.40NON_SYNONYMOUS_CODING(MISSENSE|aGa/aCa|R62T|None|Vigan.11G142400.01)Vigna nepalensis
22602053CA891356.770.40NON_SYNONYMOUS_CODING(MISSENSE|tGg/tTg|W61L|None|Vigan.11G142400.01)Vigna nepalensis
22602054AT891359.770.40NON_SYNONYMOUS_CODING(MISSENSE|Tgg/Agg|W61R|None|Vigan.11G142400.01)Vigna nepalensis
22602062TA891486.770.44NON_SYNONYMOUS_CODING(MISSENSE|gAg/gTg|E58V|None|Vigan.11G142400.01)Vigna nepalensis
22602063CA881489.770.45STOP_GAINED(NONSENSE|Gag/Tag|E58*|None|Vigan.11G142400.01)Vigna nepalensis
22602076CA881770.770.52INTRON(|||None|Vigan.11G142400.01), SPLICE_SITE_ACCEPTOR(|||None|Vigan.11G142400.01)Vigna nepalensis
22602077TG871773.770.52INTRON(|||None|Vigan.11G142400.01), SPLICE_SITE_ACCEPTOR(|||None|Vigan.11G142400.01)Vigna nepalensis
22602092CT871557.770.52INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602170CG941324.770.39INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602175GA901327.770.40INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602176TC901330.770.40INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602190GC941293.770.36INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602192GA951248.770.37INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602199GA931212.770.34INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602200CA921254.770.35INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602205GC922071.770.63INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602210TG951422.770.39INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602215AC951296.770.38INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602230CT931338.770.33INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602240CG981473.770.41INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602466GA931230.770.38INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602541AG69567.770.23INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602783TA532523.771.00INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602784CA532478.771.00INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22603139AG471893.771.00UTR_5_PRIME(|90||None|Vigan.11G142400.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
22602070ATA851725.730.52FRAME_SHIFT(|aat/|N55|None|Vigan.11G142400.01)Vigna nepalensis
22602227AAG961242.730.36INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602228AAAT961245.730.35INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602479CAAATAATC901082.730.33INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602487GTGTACTCAAATAGTTTAG981011.730.31INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602539GGAATA70558.730.26INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602603CCA441330.731.00INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis
22602771AAAAT552589.731.00INTRON(|||None|Vigan.11G142400.01)Vigna nepalensis