Variant information

Chr11:14060558 - 14063345

Filter



 [SNPs] [Indels] [SSR-associated indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
14060599CT652915.771.00DOWNSTREAM(|1595||None|Vigan.11G103900.01), DOWNSTREAM(|706||None|Vigan.11G103700.01), UTR_5_PRIME(|337||None|Vigan.11G103800.01)Vigna nepalensis
14060606TC632816.771.00DOWNSTREAM(|1588||None|Vigan.11G103900.01), DOWNSTREAM(|713||None|Vigan.11G103700.01), UTR_5_PRIME(|330||None|Vigan.11G103800.01)Vigna nepalensis
14060758TG451860.771.00DOWNSTREAM(|1436||None|Vigan.11G103900.01), DOWNSTREAM(|865||None|Vigan.11G103700.01), UTR_5_PRIME(|178||None|Vigan.11G103800.01)Vigna nepalensis
14061471TG492035.770.98DOWNSTREAM(|1578||None|Vigan.11G103700.01), DOWNSTREAM(|723||None|Vigan.11G103900.01), INTRON(|||None|Vigan.11G103800.01)Vigna nepalensis
14061483CA462114.771.00DOWNSTREAM(|1590||None|Vigan.11G103700.01), DOWNSTREAM(|711||None|Vigan.11G103900.01), INTRON(|||None|Vigan.11G103800.01)Vigna nepalensis
14062022TG472111.771.00DOWNSTREAM(|172||None|Vigan.11G103900.01), DOWNSTREAM(|2129||None|Vigan.11G103700.01), INTRON(|||None|Vigan.11G103800.01)Vigna nepalensis
14062023TA482111.771.00DOWNSTREAM(|171||None|Vigan.11G103900.01), DOWNSTREAM(|2130||None|Vigan.11G103700.01), INTRON(|||None|Vigan.11G103800.01)Vigna nepalensis
14062821AT632541.771.00DOWNSTREAM(|2928||None|Vigan.11G103700.01), NON_SYNONYMOUS_CODING(MISSENSE|Att/Ttt|I265F|None|Vigan.11G103800.01), UTR_3_PRIME(|339||None|Vigan.11G103900.01)Vigna nepalensis
14062926TC622524.771.00DOWNSTREAM(|3033||None|Vigan.11G103700.01), UTR_3_PRIME(|234||None|Vigan.11G103900.01), UTR_3_PRIME(|97||None|Vigan.11G103800.01)Vigna nepalensis
14063258TC501991.771.00DOWNSTREAM(|3365||None|Vigan.11G103700.01), NON_SYNONYMOUS_CODING(MISSENSE|Att/Gtt|I240V|None|Vigan.11G103900.01), UTR_3_PRIME(|429||None|Vigan.11G103800.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
14060666GCG521897.731.00DOWNSTREAM(|1527||None|Vigan.11G103900.01), DOWNSTREAM(|774||None|Vigan.11G103700.01), UTR_5_PRIME(|269||None|Vigan.11G103800.01)Vigna nepalensis
14061381TTTA422000.731.00DOWNSTREAM(|1489||None|Vigan.11G103700.01), DOWNSTREAM(|812||None|Vigan.11G103900.01), INTRON(|||None|Vigan.11G103800.01)Vigna nepalensis
14061399CAC38992.731.00DOWNSTREAM(|1507||None|Vigan.11G103700.01), DOWNSTREAM(|794||None|Vigan.11G103900.01), INTRON(|||None|Vigan.11G103800.01)Vigna nepalensis

SSR-associated indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
14061114(TC)16(TC)2411669.731.00DOWNSTREAM(|1079||None|Vigan.11G103900.01), DOWNSTREAM(|1222||None|Vigan.11G103700.01), INTRON(|||None|Vigan.11G103800.01)Vigna nepalensis
14061636(AT)30(AT)16341326.731.00DOWNSTREAM(|1744||None|Vigan.11G103700.01), DOWNSTREAM(|557||None|Vigan.11G103900.01), INTRON(|||None|Vigan.11G103800.01)Vigna nepalensis