Variant information

Chr10:9741040 - 9750395

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
9741533TG441655.771.00NON_SYNONYMOUS_CODING(MISSENSE|cTc/cGc|L5R|None|Vigan.10G085000.01)Vigna nepalensis
9741783AG562393.771.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9741877CT451818.771.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9742435TG692752.771.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9742843TA742916.771.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9742892TG602203.771.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9743075GA451877.771.00SYNONYMOUS_CODING(SILENT|ccG/ccA|P218|None|Vigan.10G085000.01)Vigna nepalensis
9743300TC742999.771.00SYNONYMOUS_CODING(SILENT|agT/agC|S293|None|Vigan.10G085000.01)Vigna nepalensis
9743746CT622455.771.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9744192AT522174.771.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9744394TC692810.771.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9745286CT491980.771.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9745405AG692615.771.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9745787GA552127.771.00SYNONYMOUS_CODING(SILENT|aaG/aaA|K509|None|Vigan.10G085000.01)Vigna nepalensis
9745963CA582325.771.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9746561TC491950.771.00INTRON(|||None|Vigan.10G085000.01), SPLICE_SITE_REGION(|||None|Vigan.10G085000.01)Vigna nepalensis
9746636CT391583.771.00SYNONYMOUS_CODING(SILENT|Ctg/Ttg|L584|None|Vigan.10G085000.01)Vigna nepalensis
9746708AC321286.771.00SYNONYMOUS_CODING(SILENT|Agg/Cgg|R608|None|Vigan.10G085000.01)Vigna nepalensis
9746809GT401679.771.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9747967GC592307.771.00DOWNSTREAM(|3981||None|Vigan.10G085100.01), INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9748701CT712776.771.00DOWNSTREAM(|3247||None|Vigan.10G085100.01), INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9749209TC532059.771.00DOWNSTREAM(|2739||None|Vigan.10G085100.01), SYNONYMOUS_CODING(SILENT|gtT/gtC|V861|None|Vigan.10G085000.01)Vigna nepalensis
9750192CG722926.771.00DOWNSTREAM(|1756||None|Vigan.10G085100.01), DOWNSTREAM(|4270||None|Vigan.10G085200.01), UTR_3_PRIME(|800||None|Vigan.10G085000.01)Vigna nepalensis
9750235GA742958.770.99DOWNSTREAM(|1713||None|Vigan.10G085100.01), DOWNSTREAM(|4227||None|Vigan.10G085200.01), UTR_3_PRIME(|843||None|Vigan.10G085000.01)Vigna nepalensis
9750384GA602376.771.00DOWNSTREAM(|1564||None|Vigan.10G085100.01), DOWNSTREAM(|4078||None|Vigan.10G085200.01), UTR_3_PRIME(|992||None|Vigan.10G085000.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
9741803TTTTC452132.731.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9743503CTGC572466.731.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9743600GGA541640.731.00INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis
9748983GGTT482091.731.00DOWNSTREAM(|2964||None|Vigan.10G085100.01), INTRON(|||None|Vigan.10G085000.01)Vigna nepalensis