Variant information

Chr10:10034706 - 10038655

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 [SNPs] [Indels] [SSR-associated indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
10035650AT622338.771.00DOWNSTREAM(|3898||None|Vigan.10G087500.01), INTRON(|||None|Vigan.10G087400.01)Vigna nepalensis
10035784TC552404.771.00DOWNSTREAM(|3764||None|Vigan.10G087500.01), INTRON(|||None|Vigan.10G087400.01)Vigna nepalensis
10035797GC572481.771.00DOWNSTREAM(|3751||None|Vigan.10G087500.01), INTRON(|||None|Vigan.10G087400.01)Vigna nepalensis
10035879AG632549.771.00DOWNSTREAM(|3669||None|Vigan.10G087500.01), INTRON(|||None|Vigan.10G087400.01)Vigna nepalensis
10035975GA371481.771.00DOWNSTREAM(|3573||None|Vigan.10G087500.01), INTRON(|||None|Vigan.10G087400.01)Vigna nepalensis
10036287TG542153.771.00DOWNSTREAM(|3261||None|Vigan.10G087500.01), NON_SYNONYMOUS_CODING(MISSENSE|Tct/Gct|S246A|None|Vigan.10G087400.01)Vigna nepalensis
10037587CT552241.771.00DOWNSTREAM(|1961||None|Vigan.10G087500.01), INTRON(|||None|Vigan.10G087400.01)Vigna nepalensis
10038276CT592471.771.00DOWNSTREAM(|1272||None|Vigan.10G087500.01), UTR_3_PRIME(|13||None|Vigan.10G087400.01)Vigna nepalensis
10038585GA652887.771.00DOWNSTREAM(|963||None|Vigan.10G087500.01), UTR_3_PRIME(|322||None|Vigan.10G087400.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
10038583ATA652878.731.00DOWNSTREAM(|964||None|Vigan.10G087500.01), UTR_3_PRIME(|321||None|Vigan.10G087400.01)Vigna nepalensis

SSR-associated indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
10035187(GGA)7(GGA)818777.731.00CODON_INSERTION(|gga/GGAgga|G62GG|None|Vigan.10G087400.01), DOWNSTREAM(|4360||None|Vigan.10G087500.01)Vigna nepalensis