Variant information

Chr09:7346240 - 7359061

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
7346388CT542145.771.00UTR_5_PRIME(|1||None|Vigan.09G054400.01)Vigna nepalensis
7346431CT491798.771.00NON_SYNONYMOUS_CODING(MISSENSE|Ccc/Tcc|P15S|None|Vigan.09G054400.01)Vigna nepalensis
7346889GA662516.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7346920GA562128.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7347268AG451662.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7347395TA481793.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7347467AG441735.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7347511GA401615.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7347647CT562230.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7348168AC582383.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7348567TG622459.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7348612AT592774.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7348728TC642902.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7348800TC431817.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7348871GT371559.771.00NON_SYNONYMOUS_CODING(MISSENSE|Gca/Tca|A113S|None|Vigan.09G054400.01)Vigna nepalensis
7348985CT712935.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7349217TG461858.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7349288TC522038.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7349542AT542223.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7349583AC652509.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7349629GC622452.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7349686CG702734.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7349785AT562335.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7349833CT451853.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7349878CG421895.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7349879AT421895.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7349944CT472068.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7349960GA462032.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7350035CT501855.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7350616GT552179.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7350656CA501887.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7350782CA451759.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7350889GA361484.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351075CG281325.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351113GA291221.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351122TC261214.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351134GA361508.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351184AG401737.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351187CT381737.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351188CT381737.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351204TC361591.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351222TA401771.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351245TC401816.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351246GT391771.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351261CT391715.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351344TC421693.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351387CT391520.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351456TC461835.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351619TA461793.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351695CT532054.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351721TC532117.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351745CG582675.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351752AG632794.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351771GC672573.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351801GT612416.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351902CG682999.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351909AG672991.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7352007AG461943.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7352037TC472145.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7352047TG472069.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7352136CG421701.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7352190GT391726.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7352244CT381466.770.97INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7352604GA552211.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7352964GA612494.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7353112GA461855.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7353211TC441811.771.00SYNONYMOUS_CODING(SILENT|gaT/gaC|D137|None|Vigan.09G054400.01)Vigna nepalensis
7353329GA471862.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7353417AG491814.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7354398TG472078.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7354400GT462078.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7354553GA632526.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7354594TC582284.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7354785GT572626.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7354786GT592626.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7354787AT592626.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7354920TC512142.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7355146AG622426.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7355330CT622444.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7355700TG722711.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7355792TA592298.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7356328AT612527.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7356423TC622547.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7356456AG562281.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7357297TC602342.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7357380GA502023.771.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7358880GT632438.771.00UTR_3_PRIME(|59||None|Vigan.09G054400.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
7346372AGA491945.731.00UTR_5_PRIME(|16||None|Vigan.09G054400.01)Vigna nepalensis
7346943CGTGGTGGC451989.731.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7348620CTAC652920.731.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7348714GGT632741.731.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7350066TTTGAATCACTCAATAACTTAGGAGAATCACTTTCACTAAGATAAAAAGGATAAAACTCTAACATTGTTGCATAAAACTTCACTTGTTTC182563.731.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7351086CAC291258.731.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7352189GGA391717.731.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7353276TGCAGAGTTCTTGTGGT462030.731.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7354013ATA461541.731.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7357077TGT612093.731.00INTRON(|||None|Vigan.09G054400.01)Vigna nepalensis
7358861ATA531693.731.00UTR_3_PRIME(|41||None|Vigan.09G054400.01)Vigna nepalensis