Variant information

Chr09:5535145 - 5540001

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 [SNPs] [Indels] [SSR-associated indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
5536224GA622440.771.00INTRON(|||None|Vigan.09G044700.01)Vigna nepalensis
5536311GA491920.771.00INTRON(|||None|Vigan.09G044700.01)Vigna nepalensis
5536983AG532077.771.00INTRON(|||None|Vigan.09G044700.01)Vigna nepalensis
5537437CG421636.771.00INTRON(|||None|Vigan.09G044700.01)Vigna nepalensis
5537701AT552079.771.00INTRON(|||None|Vigan.09G044700.01)Vigna nepalensis
5537769AT502281.771.00INTRON(|||None|Vigan.09G044700.01)Vigna nepalensis
5537770AT522281.771.00INTRON(|||None|Vigan.09G044700.01)Vigna nepalensis
5539545AT532225.771.00UTR_5_PRIME(|357||None|Vigan.09G044700.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
5537959CAC541611.731.00INTRON(|||None|Vigan.09G044700.01)Vigna nepalensis
5538340AGATATA7154.920.71INTRON(|||None|Vigan.09G044700.01)Vigna nepalensis
5539033CAC541649.731.00INTRON(|||None|Vigan.09G044700.01)Vigna nepalensis
5539495AAT511423.731.00UTR_5_PRIME(|308||None|Vigan.09G044700.01)Vigna nepalensis
5539792ATATA572453.731.00UTR_5_PRIME(|605||None|Vigan.09G044700.01)Vigna nepalensis

SSR-associated indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
5538338(AT)27(AT)267154.920.71INTRON(|||None|Vigan.09G044700.01)Vigna nepalensis