VIGGS:Variant information

Chr09:15777825 - 15779492

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
15777851	A	G	41	1612.77	1.00	UTR_5_PRIME(\|55\|\|None\|Vigan.09G105500.01)	Vigna nepalensis
15778077	C	T	50	2232.77	1.00	INTRON(\|\|\|None\|Vigan.09G105500.01)	Vigna nepalensis
15778079	A	G	48	2232.77	1.00	INTRON(\|\|\|None\|Vigan.09G105500.01)	Vigna nepalensis
15778944	C	A	65	2609.77	1.00	INTRON(\|\|\|None\|Vigan.09G105500.01)	Vigna nepalensis
15779086	A	G	62	2224.77	1.00	NON_SYNONYMOUS_CODING(MISSENSE\|aAc/aGc\|N129S\|None\|Vigan.09G105500.01)	Vigna nepalensis
15779474	A	G	60	2306.77	1.00	UTR_3_PRIME(\|330\|\|None\|Vigan.09G105500.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
15777822	AAC	A	44	1690.73	0.98	INTERGENIC(\|\|\|\|), UPSTREAM(\|2\|\|None\|Vigan.09G105500.01)	Vigna nepalensis
15777875	C	CA	38	1205.73	1.00	UTR_5_PRIME(\|30\|\|None\|Vigan.09G105500.01)	Vigna nepalensis
15778238	G	GTATA	39	1689.73	1.00	INTRON(\|\|\|None\|Vigan.09G105500.01)	Vigna nepalensis
15778822	CTA	C	48	2073.73	1.00	INTRON(\|\|\|None\|Vigan.09G105500.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
15778259	(AT)13	(AT)20	25	1172.73	1.00	INTRON(\|\|\|None\|Vigan.09G105500.01)	Vigna nepalensis