VIGGS:Variant information

Chr09:11005860 - 11007041

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
11005994	G	T	61	2254.77	1.00	DOWNSTREAM(\|4286\|\|None\|Vigan.09G078300.01), UTR_5_PRIME(\|19\|\|None\|Vigan.09G078200.01)	Vigna nepalensis
11006231	T	C	52	1945.77	1.00	DOWNSTREAM(\|4049\|\|None\|Vigan.09G078300.01), SYNONYMOUS_CODING(SILENT\|atT/atC\|I73\|None\|Vigan.09G078200.01)	Vigna nepalensis
11006258	G	A	46	2042.77	1.00	DOWNSTREAM(\|4022\|\|None\|Vigan.09G078300.01), SYNONYMOUS_CODING(SILENT\|caG/caA\|Q82\|None\|Vigan.09G078200.01)	Vigna nepalensis
11006261	C	T	45	2009.77	1.00	DOWNSTREAM(\|4019\|\|None\|Vigan.09G078300.01), SYNONYMOUS_CODING(SILENT\|aaC/aaT\|N83\|None\|Vigan.09G078200.01)	Vigna nepalensis
11006297	T	C	48	1927.77	1.00	DOWNSTREAM(\|3983\|\|None\|Vigan.09G078300.01), SYNONYMOUS_CODING(SILENT\|tcT/tcC\|S95\|None\|Vigan.09G078200.01)	Vigna nepalensis
11006384	T	G	51	2538.77	1.00	DOWNSTREAM(\|3896\|\|None\|Vigan.09G078300.01), INTRON(\|\|\|None\|Vigan.09G078200.01)	Vigna nepalensis
11006637	G	C	60	2395.77	1.00	DOWNSTREAM(\|3643\|\|None\|Vigan.09G078300.01), NON_SYNONYMOUS_CODING(MISSENSE\|aaG/aaC\|K181N\|None\|Vigan.09G078200.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
11006371	G	GT	44	1442.73	1.00	DOWNSTREAM(\|3908\|\|None\|Vigan.09G078300.01), INTRON(\|\|\|None\|Vigan.09G078200.01)	Vigna nepalensis
11006385	C	CCTATACT	52	2529.73	1.00	DOWNSTREAM(\|3894\|\|None\|Vigan.09G078300.01), INTRON(\|\|\|None\|Vigan.09G078200.01)	Vigna nepalensis
11006847	C	CT	64	2046.73	1.00	DOWNSTREAM(\|3432\|\|None\|Vigan.09G078300.01), UTR_3_PRIME(\|79\|\|None\|Vigan.09G078200.01)	Vigna nepalensis