VIGGS:Variant information

Chr08:46094253 - 46109958

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SNPs

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
46094540	G	T	94	2411.77	0.65	NON_SYNONYMOUS_CODING(MISSENSE\|cGt/cTt\|R54L\|None\|Vigan.08G361900.01)	Vigna nepalensis
46095936	T	C	31	1141.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46096280	G	C	72	331.77	0.19	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46096307	C	A	71	181.77	0.17	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46096323	G	T	68	169.77	0.18	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46096347	A	T	72	344.77	0.25	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46096398	G	C	74	355.77	0.23	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46096412	T	C	78	183.77	0.13	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46096416	C	T	76	153.77	0.13	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46096421	G	C	73	192.77	0.14	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46096462	G	A	45	132.77	0.16	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46096584	A	G	15	493.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46096622	T	A	30	1053.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46099016	C	T	58	288.77	0.19	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46099533	G	T	39	124.77	0.15	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46099535	A	T	38	124.77	0.16	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46099708	T	A	21	689.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46102473	A	T	53	2091.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103355	C	T	70	474.77	0.23	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103361	T	C	73	549.77	0.23	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103378	G	A	81	666.77	0.26	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103388	T	C	87	825.77	0.29	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103404	T	A	92	810.77	0.27	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103411	T	C	92	771.77	0.26	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103439	T	C	90	720.77	0.26	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103448	T	A	87	828.77	0.29	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103473	A	G	85	969.77	0.31	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103474	T	C	86	1008.77	0.31	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103480	T	C	80	1020.77	0.34	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103489	A	G	84	1101.77	0.33	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103501	T	C	90	1353.77	0.41	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103503	T	C	91	1419.77	0.41	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103509	A	G	97	1524.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103556	A	G	94	1467.77	0.46	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103661	T	C	72	772.77	0.36	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103672	T	C	75	947.77	0.33	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103676	A	G	71	1037.77	0.37	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103689	T	C	63	626.77	0.33	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103712	A	C	67	918.77	0.36	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103722	T	C	67	975.77	0.39	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103732	T	C	69	927.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103737	G	T	71	919.77	0.37	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103751	C	G	73	868.77	0.33	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103759	C	T	71	733.77	0.30	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103761	A	G	72	736.77	0.31	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103782	G	C	79	558.77	0.25	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103861	A	G	87	1182.77	0.34	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103864	G	A	88	1200.77	0.34	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103867	T	C	89	1108.77	0.34	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103886	G	A	76	1122.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103894	G	A	78	1162.77	0.41	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103938	T	C	84	1350.77	0.49	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103956	A	G	89	1691.77	0.56	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104059	C	T	99	1854.77	0.49	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104068	G	T	88	1788.77	0.50	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104070	T	C	89	1767.77	0.49	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104076	A	G	86	1568.77	0.47	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104078	C	T	87	1568.77	0.47	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104122	C	T	94	1529.77	0.49	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104156	A	T	76	1296.77	0.51	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104216	C	T	68	919.77	0.37	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104219	T	C	69	924.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104220	G	A	70	924.77	0.37	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104224	G	A	68	921.77	0.35	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104232	T	G	66	916.77	0.35	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104233	C	T	67	880.77	0.36	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104262	T	C	87	1267.77	0.41	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104277	G	C	90	1330.77	0.42	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104289	T	C	93	1611.77	0.44	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104293	T	G	94	1572.77	0.45	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104393	C	T	88	1683.77	0.58	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104407	T	A	83	1796.77	0.57	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104413	C	T	83	1833.77	0.57	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104422	G	A	81	1805.77	0.57	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104457	C	T	76	1146.77	0.46	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104530	G	T	85	1649.77	0.52	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104539	G	T	81	1645.77	0.53	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104554	A	C	81	1606.77	0.53	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104559	A	G	76	1513.77	0.51	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104568	A	G	77	1562.77	0.53	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104616	T	C	86	1827.77	0.55	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104617	G	A	86	1827.77	0.55	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104662	C	T	96	1518.77	0.49	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104706	T	C	84	1363.77	0.44	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104707	A	C	83	1405.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104722	T	G	84	1219.77	0.40	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104738	T	C	82	1190.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104770	T	G	85	1087.77	0.39	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104791	T	C	94	1357.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104805	G	T	97	1649.77	0.45	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104821	G	T	100	1675.77	0.47	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104886	T	C	78	677.77	0.28	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104888	G	A	75	674.77	0.25	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104895	T	C	73	411.77	0.18	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104898	G	T	73	327.77	0.16	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104900	G	T	71	285.77	0.14	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104902	A	G	70	204.77	0.11	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104946	G	A	67	2157.77	0.87	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104979	T	C	65	402.77	0.23	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104991	C	T	62	504.77	0.26	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104992	T	A, G	45	2274.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104993	A	G	61	504.77	0.26	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46104998	C	A	57	510.77	0.28	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105002	T	G	57	639.77	0.28	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105006	A	G	65	672.77	0.31	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105010	T	C	63	675.77	0.32	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105045	G	A	65	663.77	0.31	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105052	T	A	61	591.77	0.30	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105061	T	G	62	546.77	0.27	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105063	T	C	62	543.77	0.27	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105070	A	G	56	462.77	0.25	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105071	G	A	57	423.77	0.25	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105072	C	T	57	426.77	0.23	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105083	A	G	61	501.77	0.25	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105085	T	C	63	560.77	0.25	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105090	T	G	61	522.77	0.28	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105102	G	A	65	756.77	0.29	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105105	A	G	67	756.77	0.33	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105128	A	T	66	1101.77	0.39	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105130	A	G	67	1020.77	0.42	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105134	G	A	68	1113.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105139	T	C	72	1233.77	0.44	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105168	T	A	80	1389.77	0.45	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105178	T	G	84	1515.77	0.48	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105187	C	T	89	1503.77	0.45	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105210	G	T	88	1590.77	0.47	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105217	T	C	85	1512.77	0.46	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105222	A	C	83	1663.77	0.48	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105223	G	A	84	1618.77	0.48	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105231	A	G	87	1554.77	0.45	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105258	T	C	74	1007.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105271	C	T	73	1012.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105282	T	C	74	847.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105316	C	T	84	1188.77	0.45	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105335	C	T	80	1434.77	0.47	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105340	G	A	78	1504.77	0.50	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105353	A	G	86	1323.77	0.49	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105410	T	C	79	1305.77	0.44	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105413	A	G	80	1339.77	0.45	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105418	C	T	74	3145.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105458	T	G	62	1042.77	0.45	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105470	T	C	74	1263.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105472	A	G	76	1263.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105481	A	G	78	1260.77	0.41	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105492	G	T	85	1326.77	0.42	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105511	A	C	84	1245.77	0.39	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105521	A	G	86	1280.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105532	A	G	86	1232.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105554	T	C	82	1243.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105591	T	G	85	1503.77	0.46	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105595	T	C	86	1501.77	0.47	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105606	T	C	94	1753.77	0.50	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105611	T	C	94	1660.77	0.47	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105634	A	G	98	1724.77	0.47	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105637	T	G	98	1724.77	0.46	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105679	A	C	84	1463.77	0.46	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105682	G	A	83	1554.77	0.46	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105694	G	A	88	1378.77	0.42	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105703	G	A	81	1328.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105723	C	T	85	1273.77	0.41	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105733	T	C	88	1271.77	0.40	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105794	T	C	94	1130.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105807	G	A	97	1302.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105826	G	A	89	1198.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105861	C	A	85	1136.77	0.36	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105874	A	C	81	1158.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105879	A	G	80	1164.77	0.39	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105890	T	C	81	1122.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105912	A	G	73	936.77	0.37	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105929	C	T	78	1104.77	0.40	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105972	T	C	74	799.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106015	A	G	49	1023.77	0.51	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106020	T	G	46	1029.77	0.59	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106074	G	A	41	1339.78	0.90	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106097	A	C	53	2386.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106099	C	T	54	1663.77	0.85	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106168	G	C	65	1588.77	0.62	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106176	A	G	63	1494.77	0.60	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106182	A	G	63	2899.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106192	A	G	65	1392.77	0.57	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106200	T	C	66	1479.77	0.58	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106207	G	T	70	1104.77	0.46	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106215	A	T	71	1477.77	0.54	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106246	A	G	69	1590.77	0.58	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4999\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106252	C	T	69	1681.77	0.58	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4993\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106262	G	T	74	1677.77	0.57	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4983\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106263	G	A	72	1677.77	0.57	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4982\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106267	G	A	71	1644.77	0.59	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4978\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106306	T	A	79	1713.77	0.65	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4939\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106315	G	C	83	1017.77	0.37	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4930\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106366	T	G	79	1328.77	0.49	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4879\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106413	C	T	78	1125.77	0.40	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4832\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106415	C	T	76	1521.77	0.59	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4830\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106420	T	C	80	1245.77	0.40	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4825\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106426	G	A	86	1249.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4819\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106450	T	C	92	3978.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4795\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106456	A	G	94	1527.77	0.44	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4789\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106465	G	A	97	1608.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4780\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106485	T	A	91	1611.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4760\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106486	A	G	93	1572.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4759\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106488	T	C	92	1572.77	0.45	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4757\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106494	A	G	91	1522.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4751\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106509	G	A	96	1417.77	0.42	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4736\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106554	A	G	87	1361.77	0.41	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4691\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106566	T	C	85	1415.77	0.44	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4679\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106576	A	G	84	1287.77	0.42	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4669\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106580	G	T	83	1380.77	0.41	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4665\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106583	G	A	88	1758.77	0.58	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4662\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106635	A	G	73	1157.77	0.45	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4610\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106645	C	A	71	1039.77	0.39	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4600\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106651	G	A	68	1053.77	0.40	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4594\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106664	T	C	68	905.77	0.37	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4581\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106679	T	C	70	815.77	0.36	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4566\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106695	G	A	65	1436.77	0.68	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4550\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106720	G	A	67	793.77	0.34	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4525\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106732	T	G	74	858.77	0.35	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4513\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106762	T	G	77	1221.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4483\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106769	T	G	77	1260.77	0.44	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4476\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106776	C	T	72	1146.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4469\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106792	C	T	68	1065.77	0.40	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4453\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106796	A	G	69	1059.77	0.39	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4449\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106803	T	G	74	1092.77	0.39	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4442\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106810	G	A	70	1137.77	0.40	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4435\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106811	T	C	67	1140.77	0.40	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4434\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106821	A	G	70	1008.77	0.40	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4424\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106833	G	A	71	1177.77	0.45	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4412\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106837	G	A	74	1177.77	0.41	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4408\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106867	G	A	94	1832.77	0.50	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4378\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106878	G	A	96	2046.77	0.53	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4367\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106893	C	T	98	2019.77	0.54	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4352\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106969	C	T	68	1257.77	0.49	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4276\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106971	G	T	68	1254.77	0.46	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4274\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106993	A	G	73	1269.77	0.42	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4252\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107000	G	A	68	1294.77	0.54	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4245\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107008	A	T	75	1269.77	0.44	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4237\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107011	T	A	76	1311.77	0.45	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4234\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107012	A	G	76	1269.77	0.45	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4233\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107014	A	C	75	1266.77	0.45	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4231\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107028	C	T	76	1266.77	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4217\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107041	T	G	82	1374.77	0.41	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4204\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107045	T	A	87	1410.77	0.41	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4200\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107048	T	G	90	1407.77	0.42	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4197\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107055	T	C	91	1308.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4190\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107056	C	A	92	1266.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4189\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107155	T	G	85	1855.77	0.56	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4090\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107184	C	T	79	1299.77	0.44	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4061\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107190	G	A	89	1370.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4055\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107225	T	G	84	1209.77	0.40	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4020\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107234	A	G	90	1221.77	0.37	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4011\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107244	G	A	86	1127.77	0.34	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4001\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107256	G	A	83	1035.77	0.36	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3989\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107307	T	C	69	831.77	0.35	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3938\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107316	T	C	68	779.77	0.34	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3929\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107319	C	T	67	782.77	0.34	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3926\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107334	A	G	63	845.77	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3911\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107343	G	A	63	847.77	0.37	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3902\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107346	G	A	62	847.77	0.34	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3899\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107361	T	C	61	680.77	0.33	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3884\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107411	G	C	49	315.77	0.22	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3834\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107416	G	T	46	225.77	0.20	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3829\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107421	T	G	49	222.77	0.18	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3824\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107422	C	T	49	222.77	0.16	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3823\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107474	C	A	43	1718.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3771\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107515	A	G	46	1818.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3730\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107581	A	C	28	1049.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3664\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107783	T	C	36	1581.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3462\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107785	G	A	35	1581.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3460\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107852	T	G	20	823.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3393\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46108235	A	G	44	1775.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3010\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46108527	T	C	54	2115.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|2718\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46109276	C	T	55	2116.77	1.00	SYNONYMOUS_CODING(SILENT\|caC/caT\|H147\|None\|Vigan.08G361900.01), UPSTREAM(\|1969\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46109420	G	A	59	2613.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|1825\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46109434	G	A	60	2669.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|1811\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46109462	G	A	53	2376.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|1783\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46109466	T	A	51	2397.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|1779\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46109474	A	T	56	2605.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|1771\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46109476	T	A	56	2515.77	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|1769\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46109698	G	C	44	1828.77	1.00	UPSTREAM(\|1547\|\|None\|Vigan.08G362000.01), UTR_3_PRIME(\|68\|\|None\|Vigan.08G361900.01)	Vigna nepalensis

Indels

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
46094545	CGG	C	90	2317.73	0.62	FRAME_SHIFT(\|cgg/\|R56\|None\|Vigan.08G361900.01)	Vigna nepalensis
46094549	A	ATC	88	2402.73	0.64	FRAME_SHIFT(\|gag/gaTCg\|E57D?\|None\|Vigan.08G361900.01)	Vigna nepalensis
46099506	CTT	C	49	206.73	0.16	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46100324	C	CT	24	522.73	0.96	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103677	C	CAGT	69	993.73	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103848	C	CTG	80	1061.73	0.38	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46103852	AGC	A	87	999.73	0.33	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105111	CA	C	61	882.73	0.33	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105116	GGAC	G	63	840.73	0.35	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105121	T	TTCTG	64	972.73	0.36	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105141	GAGACATAGTGGGAATATT	G	84	1233.73	0.39	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105201	CAA	C	87	1584.73	0.46	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105204	T	TCG	88	1623.73	0.47	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46105909	CA	C	69	969.73	0.36	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106051	G	GA	31	996.77	0.90	INTRON(\|\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46106582	TGAA	T	91	1314.73	0.41	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4662\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106710	C	CACG	68	736.73	0.32	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4534\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106714	T	TCCGCC	63	831.73	0.29	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4530\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106715	T	TC	64	912.73	0.30	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4529\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106982	A	ATGGC	69	1221.73	0.43	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4262\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46106983	CAGTA	C	74	1212.73	0.42	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4261\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107151	T	TA	84	1852.73	0.56	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|4093\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107367	A	ACCACC	59	697.73	0.32	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3877\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107368	T	TC	59	694.73	0.32	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3876\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107393	A	AG	56	311.73	0.25	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3851\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107404	A	AC	53	356.73	0.25	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3840\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107427	A	AGGAGGTT	51	165.73	0.16	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3817\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107429	A	AAATTTT	48	165.73	0.12	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3815\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46107430	G	GGTGGTAAAT	46	130.73	0.09	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3814\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46108137	TCA	T	51	1916.73	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|3107\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46109459	T	TA	53	2367.73	1.00	INTRON(\|\|\|None\|Vigan.08G361900.01), UPSTREAM(\|1785\|\|None\|Vigan.08G362000.01)	Vigna nepalensis
46109738	G	GA	44	1428.73	1.00	UPSTREAM(\|1506\|\|None\|Vigan.08G362000.01), UTR_3_PRIME(\|109\|\|None\|Vigan.08G361900.01)	Vigna nepalensis
46109848	T	TTGAG	45	1909.73	1.00	UPSTREAM(\|1396\|\|None\|Vigan.08G362000.01), UTR_3_PRIME(\|219\|\|None\|Vigan.08G361900.01)	Vigna nepalensis