Variant information

Chr08:41586061 - 41591050

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
41586204TC341317.771.00DOWNSTREAM(|3839||None|Vigan.08G322600.01), NON_SYNONYMOUS_CODING(MISSENSE|Ttc/Ctc|F23L|None|Vigan.08G322700.01)Vigna nepalensis
41586461AG421627.771.00DOWNSTREAM(|4096||None|Vigan.08G322600.01), SYNONYMOUS_CODING(SILENT|gaA/gaG|E108|None|Vigan.08G322700.01)Vigna nepalensis
41586527GA451640.771.00DOWNSTREAM(|4162||None|Vigan.08G322600.01), SYNONYMOUS_CODING(SILENT|ggG/ggA|G130|None|Vigan.08G322700.01)Vigna nepalensis
41586908TG532104.771.00DOWNSTREAM(|4543||None|Vigan.08G322600.01), INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41586927AG522040.771.00DOWNSTREAM(|4562||None|Vigan.08G322600.01), INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41587033AC522291.771.00DOWNSTREAM(|4668||None|Vigan.08G322600.01), INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41587052GT552533.771.00DOWNSTREAM(|4687||None|Vigan.08G322600.01), INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41587114AT542492.771.00DOWNSTREAM(|4749||None|Vigan.08G322600.01), INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41587123AC572497.771.00DOWNSTREAM(|4758||None|Vigan.08G322600.01), INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41587201CT542092.771.00DOWNSTREAM(|4836||None|Vigan.08G322600.01), INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41587349CT461835.771.00DOWNSTREAM(|4984||None|Vigan.08G322600.01), INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41587561TA461892.771.00SYNONYMOUS_CODING(SILENT|gcT/gcA|A255|None|Vigan.08G322700.01)Vigna nepalensis
41587621CT471670.770.98SYNONYMOUS_CODING(SILENT|acC/acT|T275|None|Vigan.08G322700.01)Vigna nepalensis
41587721CT562190.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41587919GA602317.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588045AG773140.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588398AC532410.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588408TC532371.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588456TA552435.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588465AC552473.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588514GA512248.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588517GT472147.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588558GT471922.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588576AT491966.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588690TC532401.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588692TC542437.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588693AC542437.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588694TG532437.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588800CA552241.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41588846AG683022.771.00NON_SYNONYMOUS_CODING(MISSENSE|Aga/Gga|R347G|None|Vigan.08G322700.01), SPLICE_SITE_REGION(|||None|Vigan.08G322700.01)Vigna nepalensis
41588847GC683022.771.00NON_SYNONYMOUS_CODING(MISSENSE|aGa/aCa|R347T|None|Vigan.08G322700.01), SPLICE_SITE_REGION(|||None|Vigan.08G322700.01)Vigna nepalensis
41589554AT552497.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41589559CT572533.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41589600TC582257.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41589979AG572285.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41590014AT572279.771.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41590506CT321303.771.00SYNONYMOUS_CODING(SILENT|ttC/ttT|F577|None|Vigan.08G322700.01)Vigna nepalensis
41590593TG431585.771.00UTR_3_PRIME(|66||None|Vigan.08G322700.01)Vigna nepalensis
41590855GA552047.771.00UTR_3_PRIME(|328||None|Vigan.08G322700.01)Vigna nepalensis
41590994CT793544.771.00UTR_3_PRIME(|467||None|Vigan.08G322700.01)Vigna nepalensis
41591030CG692813.771.00UTR_3_PRIME(|503||None|Vigan.08G322700.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
41587056CCAA502437.731.00DOWNSTREAM(|4692||None|Vigan.08G322600.01), INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41587669TTAT411543.731.00INTRON(|||None|Vigan.08G322700.01)Vigna nepalensis
41590913TAT632019.731.00UTR_3_PRIME(|387||None|Vigan.08G322700.01)Vigna nepalensis
41591004TTC783462.731.00UTR_3_PRIME(|478||None|Vigan.08G322700.01)Vigna nepalensis