VIGGS:Variant information

Chr08:25002084 - 25003228

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
25002196	A	T	56	2233.77	1.00	UTR_5_PRIME(\|213\|\|None\|Vigan.08G251400.01)	Vigna nepalensis
25002453	G	C	43	1653.77	1.00	SYNONYMOUS_CODING(SILENT\|gtG/gtC\|V15\|None\|Vigan.08G251400.01)	Vigna nepalensis
25002818	G	A	45	1996.77	1.00	NON_SYNONYMOUS_CODING(MISSENSE\|Gct/Act\|A63T\|None\|Vigan.08G251400.01)	Vigna nepalensis
25002819	C	T	45	1996.77	1.00	NON_SYNONYMOUS_CODING(MISSENSE\|gCt/gTt\|A63V\|None\|Vigan.08G251400.01)	Vigna nepalensis
25002920	G	A	49	1934.77	1.00	NON_SYNONYMOUS_CODING(MISSENSE\|Gga/Aga\|G97R\|None\|Vigan.08G251400.01)	Vigna nepalensis
25002968	A	C	59	2334.77	1.00	UTR_3_PRIME(\|31\|\|None\|Vigan.08G251400.01)	Vigna nepalensis
25003107	G	C	70	2794.77	1.00	UTR_3_PRIME(\|170\|\|None\|Vigan.08G251400.01)	Vigna nepalensis
25003165	T	C	69	2689.77	1.00	UTR_3_PRIME(\|228\|\|None\|Vigan.08G251400.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
25002504	CTT	C	42	1619.73	1.00	INTRON(\|\|\|None\|Vigan.08G251400.01)	Vigna nepalensis
25002690	C	CT	60	1905.73	1.00	INTRON(\|\|\|None\|Vigan.08G251400.01)	Vigna nepalensis
25003190	GT	G	60	1567.73	0.98	UTR_3_PRIME(\|254\|\|None\|Vigan.08G251400.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
25002715	(GCG)8	(GCG)7	31	1333.73	1.00	CODON_DELETION(\|gcg/\|A29\|None\|Vigan.08G251400.01)	Vigna nepalensis