Variant information

Chr08:18505241 - 18533072

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
18505267AC19731.771.00UTR_5_PRIME(|108||None|Vigan.08G206500.01)Vigna nepalensis
18506499GA732889.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18506718CG672725.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18507596AG381450.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18508096GA431780.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18508301CT512045.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18508758GA19812.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18508798TC16736.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18508833TC19871.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18508866AG16495.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18508912TC11398.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18508968CT20678.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18509037TC21801.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18509051CT20790.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18509063CA22875.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18509096TC251201.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18509104GA311324.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18509136AC301209.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18509191CT411605.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18509489CT411238.780.93INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18509622TC38948.770.76INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18509914AG311225.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18509933AG291014.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18510578AG21716.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18510659CT22659.780.91INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18510700GC8204.280.88INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18510940AG13341.180.85INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18511462TC411608.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18511603GA351290.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18511848GA5180.91.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18512089CT10360.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18512493GA401447.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18512526GA421322.770.95INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18512578GA411245.530.88INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18512638TC421352.220.90INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18512829GA73164.770.18INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18513011CT451847.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18513504TC331296.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18513648TC351378.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18513675GA351399.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18513740GA371367.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18514239AG411627.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18514519CT371478.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18514699TC261141.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18514708CT261141.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18514897AG11425.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18515211TG8371.781.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18515213AG9371.781.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18515265GA21788.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18515487CT562209.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18515797TC522014.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18516053GT472086.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18516054AT472086.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18516838TA361473.770.97INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18516842CT331366.770.97INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18516855CT301248.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18516877CT21855.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18517201AG6102.780.83INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18517924AT724.780.43INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18519202CT6241.841.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18519215AG6241.841.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18519355CA552.770.60INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18520499CA7318.781.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18520501TC8318.781.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18520535CT15457.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18520570CA23670.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18521611TA25993.840.96INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18521615CT25993.840.96INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18523426GA381409.771.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18524138CT12194.770.42INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18530069AG572308.771.00INTRON(|||None|Vigan.08G206500.01), UPSTREAM(|3945||None|Vigan.08G206600.01)Vigna nepalensis
18530208TA562273.771.00INTRON(|||None|Vigan.08G206500.01), UPSTREAM(|3806||None|Vigan.08G206600.01)Vigna nepalensis
18530946TC602331.771.00INTRON(|||None|Vigan.08G206500.01), UPSTREAM(|3068||None|Vigan.08G206600.01)Vigna nepalensis
18531094GA592347.771.00SYNONYMOUS_CODING(SILENT|ttG/ttA|L91|None|Vigan.08G206500.01), UPSTREAM(|2920||None|Vigan.08G206600.01)Vigna nepalensis
18531360GA572215.771.00INTRON(|||None|Vigan.08G206500.01), UPSTREAM(|2654||None|Vigan.08G206600.01)Vigna nepalensis
18531586TA491928.771.00INTRON(|||None|Vigan.08G206500.01), UPSTREAM(|2428||None|Vigan.08G206600.01)Vigna nepalensis
18531612AG522119.771.00INTRON(|||None|Vigan.08G206500.01), UPSTREAM(|2402||None|Vigan.08G206600.01)Vigna nepalensis
18532118GA592108.771.00INTRON(|||None|Vigan.08G206500.01), UPSTREAM(|1896||None|Vigan.08G206600.01)Vigna nepalensis
18532718TC592307.771.00UPSTREAM(|1296||None|Vigan.08G206600.01), UTR_3_PRIME(|280||None|Vigan.08G206500.01)Vigna nepalensis
18532839GC562290.771.00UPSTREAM(|1175||None|Vigan.08G206600.01), UTR_3_PRIME(|401||None|Vigan.08G206500.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
18507981AAAAGGAGGTTATGCTCCCTAGTGACCG8752.731.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18508776CCCGCCGCCGG14765.731.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18514730GTG321257.731.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18515388AAGTTTAAAGTTTAGG392012.731.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18516065TGT431366.731.00INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18517908TCAGAAT925.740.22INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18517917ATCAAGAAGAAGCTTGACAAGTATTATA925.740.22INTRON(|||None|Vigan.08G206500.01)Vigna nepalensis
18529822TTA611687.731.00INTRON(|||None|Vigan.08G206500.01), UPSTREAM(|4191||None|Vigan.08G206600.01)Vigna nepalensis
18529900AGAAAGAAGATA572512.731.00INTRON(|||None|Vigan.08G206500.01), UPSTREAM(|4113||None|Vigan.08G206600.01)Vigna nepalensis
18530259ATA571786.731.00INTRON(|||None|Vigan.08G206500.01), UPSTREAM(|3754||None|Vigan.08G206600.01)Vigna nepalensis
18530395TTGT592457.731.00INTRON(|||None|Vigan.08G206500.01), UPSTREAM(|3618||None|Vigan.08G206600.01)Vigna nepalensis
18530498CCACGATTTCAATTGCCAATTACTGGACACTCTC391693.731.00INTRON(|||None|Vigan.08G206500.01), UPSTREAM(|3515||None|Vigan.08G206600.01)Vigna nepalensis
18532086AGACA562455.731.00INTRON(|||None|Vigan.08G206500.01), UPSTREAM(|1927||None|Vigan.08G206600.01)Vigna nepalensis