Variant information

Chr08:17462041 - 17464821

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
17462053TA481959.771.00UPSTREAM(|37||None|Vigan.08G196100.01), UPSTREAM(|4260||None|Vigan.08G196000.01), UTR_5_PRIME(|474||None|Vigan.08G196200.01)Vigna nepalensis
17462283GA401282.771.00UPSTREAM(|267||None|Vigan.08G196100.01), UPSTREAM(|4490||None|Vigan.08G196000.01), UTR_5_PRIME(|244||None|Vigan.08G196200.01)Vigna nepalensis
17462441AC511984.771.00START_GAINED(|||None|Vigan.08G196200.01), UPSTREAM(|425||None|Vigan.08G196100.01), UPSTREAM(|4648||None|Vigan.08G196000.01), UTR_5_PRIME(|86||None|Vigan.08G196200.01)Vigna nepalensis
17462457GA461792.771.00UPSTREAM(|441||None|Vigan.08G196100.01), UPSTREAM(|4664||None|Vigan.08G196000.01), UTR_5_PRIME(|70||None|Vigan.08G196200.01)Vigna nepalensis
17462638GC421599.770.98NON_SYNONYMOUS_CODING(MISSENSE|Gcg/Ccg|A38P|None|Vigan.08G196200.01), SPLICE_SITE_REGION(|||None|Vigan.08G196200.01), UPSTREAM(|4845||None|Vigan.08G196000.01), UPSTREAM(|622||None|Vigan.08G196100.01)Vigna nepalensis
17462809CT461826.771.00SYNONYMOUS_CODING(SILENT|cgC/cgT|R65|None|Vigan.08G196200.01), UPSTREAM(|793||None|Vigan.08G196100.01)Vigna nepalensis
17463087CT542113.771.00INTRON(|||None|Vigan.08G196200.01), UPSTREAM(|1071||None|Vigan.08G196100.01)Vigna nepalensis
17463757CT501961.771.00SYNONYMOUS_CODING(SILENT|ctC/ctT|L120|None|Vigan.08G196200.01), UPSTREAM(|1741||None|Vigan.08G196100.01)Vigna nepalensis
17464210TC491940.771.00INTRON(|||None|Vigan.08G196200.01), SPLICE_SITE_DONOR(|||None|Vigan.08G196200.01), UPSTREAM(|2194||None|Vigan.08G196100.01)Vigna nepalensis
17464748GA702814.771.00UPSTREAM(|2732||None|Vigan.08G196100.01), UPSTREAM(|4526||None|Vigan.08G196300.01), UTR_3_PRIME(|145||None|Vigan.08G196200.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
17462723GGA552018.731.00INTRON(|||None|Vigan.08G196200.01), SPLICE_SITE_REGION(|||None|Vigan.08G196200.01), UPSTREAM(|4931||None|Vigan.08G196000.01), UPSTREAM(|708||None|Vigan.08G196100.01)Vigna nepalensis