Variant information

Chr08:15116484 - 15120521

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
15116766AT471951.771.00UPSTREAM(|3761||None|Vigan.08G169100.01), UPSTREAM(|536||None|Vigan.08G168900.01), UTR_3_PRIME(|548||None|Vigan.08G169000.01)Vigna nepalensis
15116955AC502034.771.00UPSTREAM(|3572||None|Vigan.08G169100.01), UPSTREAM(|725||None|Vigan.08G168900.01), UTR_3_PRIME(|359||None|Vigan.08G169000.01)Vigna nepalensis
15116987AT562533.771.00UPSTREAM(|3540||None|Vigan.08G169100.01), UPSTREAM(|757||None|Vigan.08G168900.01), UTR_3_PRIME(|327||None|Vigan.08G169000.01)Vigna nepalensis
15117398AG572299.771.00SYNONYMOUS_CODING(SILENT|gtT/gtC|V416|None|Vigan.08G169000.01), UPSTREAM(|1168||None|Vigan.08G168900.01), UPSTREAM(|3129||None|Vigan.08G169100.01)Vigna nepalensis
15117601AT441788.771.00INTRON(|||None|Vigan.08G169000.01), SPLICE_SITE_REGION(|||None|Vigan.08G169000.01), UPSTREAM(|1371||None|Vigan.08G168900.01), UPSTREAM(|2926||None|Vigan.08G169100.01)Vigna nepalensis
15118061TC582380.771.00INTRON(|||None|Vigan.08G169000.01), UPSTREAM(|1831||None|Vigan.08G168900.01), UPSTREAM(|2466||None|Vigan.08G169100.01)Vigna nepalensis
15118792AG451783.771.00INTRON(|||None|Vigan.08G169000.01), UPSTREAM(|1735||None|Vigan.08G169100.01), UPSTREAM(|2562||None|Vigan.08G168900.01)Vigna nepalensis
15118861AT491982.771.00INTRON(|||None|Vigan.08G169000.01), UPSTREAM(|1666||None|Vigan.08G169100.01), UPSTREAM(|2631||None|Vigan.08G168900.01)Vigna nepalensis
15119055GC522197.771.00INTRON(|||None|Vigan.08G169000.01), UPSTREAM(|1472||None|Vigan.08G169100.01), UPSTREAM(|2825||None|Vigan.08G168900.01)Vigna nepalensis
15119408CT431749.771.00SYNONYMOUS_CODING(SILENT|ggG/ggA|G177|None|Vigan.08G169000.01), UPSTREAM(|1119||None|Vigan.08G169100.01), UPSTREAM(|3178||None|Vigan.08G168900.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
15116994ATA592599.731.00UPSTREAM(|3532||None|Vigan.08G169100.01), UPSTREAM(|765||None|Vigan.08G168900.01), UTR_3_PRIME(|319||None|Vigan.08G169000.01)Vigna nepalensis
15117717TTA431699.731.00INTRON(|||None|Vigan.08G169000.01), UPSTREAM(|1488||None|Vigan.08G168900.01), UPSTREAM(|2809||None|Vigan.08G169100.01)Vigna nepalensis
15119282GGGA592026.730.97INTRON(|||None|Vigan.08G169000.01), UPSTREAM(|1244||None|Vigan.08G169100.01), UPSTREAM(|3053||None|Vigan.08G168900.01)Vigna nepalensis