Variant information

Chr08:13386030 - 13389423

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
13386101TC572522.771.00DOWNSTREAM(|2887||None|Vigan.08G150600.01), DOWNSTREAM(|825||None|Vigan.08G150700.01), START_GAINED(|||None|Vigan.08G150800.01), UTR_5_PRIME(|140||None|Vigan.08G150800.01)Vigna nepalensis
13386116TC552363.771.00DOWNSTREAM(|2902||None|Vigan.08G150600.01), DOWNSTREAM(|840||None|Vigan.08G150700.01), START_GAINED(|||None|Vigan.08G150800.01), UTR_5_PRIME(|125||None|Vigan.08G150800.01)Vigna nepalensis
13386212TA462008.771.00DOWNSTREAM(|2998||None|Vigan.08G150600.01), DOWNSTREAM(|936||None|Vigan.08G150700.01), UTR_5_PRIME(|29||None|Vigan.08G150800.01)Vigna nepalensis
13386223GT421931.771.00DOWNSTREAM(|3009||None|Vigan.08G150600.01), DOWNSTREAM(|947||None|Vigan.08G150700.01), UTR_5_PRIME(|18||None|Vigan.08G150800.01)Vigna nepalensis
13386624AG401590.771.00DOWNSTREAM(|1348||None|Vigan.08G150700.01), DOWNSTREAM(|3410||None|Vigan.08G150600.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13386636CT401605.771.00DOWNSTREAM(|1360||None|Vigan.08G150700.01), DOWNSTREAM(|3422||None|Vigan.08G150600.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13386701TC381546.771.00DOWNSTREAM(|1425||None|Vigan.08G150700.01), DOWNSTREAM(|3487||None|Vigan.08G150600.01), SYNONYMOUS_CODING(SILENT|atT/atC|I96|None|Vigan.08G150800.01)Vigna nepalensis
13387011TC512205.771.00DOWNSTREAM(|1735||None|Vigan.08G150700.01), DOWNSTREAM(|3797||None|Vigan.08G150600.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13387013CT502205.771.00DOWNSTREAM(|1737||None|Vigan.08G150700.01), DOWNSTREAM(|3799||None|Vigan.08G150600.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13387656CA552443.771.00DOWNSTREAM(|2380||None|Vigan.08G150700.01), DOWNSTREAM(|4442||None|Vigan.08G150600.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13387664AG532330.771.00DOWNSTREAM(|2388||None|Vigan.08G150700.01), DOWNSTREAM(|4450||None|Vigan.08G150600.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13387729TA562220.771.00DOWNSTREAM(|2453||None|Vigan.08G150700.01), DOWNSTREAM(|4515||None|Vigan.08G150600.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13387796AT592235.771.00DOWNSTREAM(|2520||None|Vigan.08G150700.01), DOWNSTREAM(|4582||None|Vigan.08G150600.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13388137AG411671.771.00DOWNSTREAM(|2861||None|Vigan.08G150700.01), DOWNSTREAM(|4923||None|Vigan.08G150600.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13388159TC441639.770.98DOWNSTREAM(|2883||None|Vigan.08G150700.01), DOWNSTREAM(|4945||None|Vigan.08G150600.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13388253CA552141.771.00DOWNSTREAM(|2977||None|Vigan.08G150700.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13388362AC491975.771.00DOWNSTREAM(|3086||None|Vigan.08G150700.01), DOWNSTREAM(|4935||None|Vigan.08G150900.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13388514GT552438.771.00DOWNSTREAM(|3238||None|Vigan.08G150700.01), DOWNSTREAM(|4783||None|Vigan.08G150900.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13388521AG572496.771.00DOWNSTREAM(|3245||None|Vigan.08G150700.01), DOWNSTREAM(|4776||None|Vigan.08G150900.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13388619AG502022.771.00DOWNSTREAM(|3343||None|Vigan.08G150700.01), DOWNSTREAM(|4678||None|Vigan.08G150900.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13388692TC471863.771.00DOWNSTREAM(|3416||None|Vigan.08G150700.01), DOWNSTREAM(|4605||None|Vigan.08G150900.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13388829GA602728.771.00DOWNSTREAM(|3553||None|Vigan.08G150700.01), DOWNSTREAM(|4468||None|Vigan.08G150900.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13389242AC612473.771.00DOWNSTREAM(|3966||None|Vigan.08G150700.01), DOWNSTREAM(|4055||None|Vigan.08G150900.01), UTR_3_PRIME(|176||None|Vigan.08G150800.01)Vigna nepalensis
13389307AG612452.771.00DOWNSTREAM(|3990||None|Vigan.08G150900.01), DOWNSTREAM(|4031||None|Vigan.08G150700.01), UTR_3_PRIME(|241||None|Vigan.08G150800.01)Vigna nepalensis
13389328AG612476.771.00DOWNSTREAM(|3969||None|Vigan.08G150900.01), DOWNSTREAM(|4052||None|Vigan.08G150700.01), UTR_3_PRIME(|262||None|Vigan.08G150800.01)Vigna nepalensis
13389414AT451242.771.00DOWNSTREAM(|3883||None|Vigan.08G150900.01), DOWNSTREAM(|4138||None|Vigan.08G150700.01), UTR_3_PRIME(|348||None|Vigan.08G150800.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
13388810GGGTCTTTCGTTTCCGCG572649.731.00DOWNSTREAM(|3535||None|Vigan.08G150700.01), DOWNSTREAM(|4486||None|Vigan.08G150900.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13388830CCATAAATATGCAAATAATTTATCTATATTCTATTTAGTTGGATAAGAGAC612722.731.00DOWNSTREAM(|3555||None|Vigan.08G150700.01), DOWNSTREAM(|4466||None|Vigan.08G150900.01), INTRON(|||None|Vigan.08G150800.01)Vigna nepalensis
13389184ATCGTGAATTA552429.731.00DOWNSTREAM(|3909||None|Vigan.08G150700.01), DOWNSTREAM(|4112||None|Vigan.08G150900.01), UTR_3_PRIME(|119||None|Vigan.08G150800.01)Vigna nepalensis
13389357CCATTGTGGAAACA582779.731.00DOWNSTREAM(|3939||None|Vigan.08G150900.01), DOWNSTREAM(|4082||None|Vigan.08G150700.01), UTR_3_PRIME(|292||None|Vigan.08G150800.01)Vigna nepalensis