Variant information

Chr08:12386760 - 12390760

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
12386944CG552217.771.00DOWNSTREAM(|2283||None|Vigan.08G140100.01), UTR_3_PRIME(|49||None|Vigan.08G140200.01)Vigna nepalensis
12386991CT512238.771.00DOWNSTREAM(|2330||None|Vigan.08G140100.01), UTR_3_PRIME(|2||None|Vigan.08G140200.01)Vigna nepalensis
12386998TC542354.771.00DOWNSTREAM(|2337||None|Vigan.08G140100.01), NON_SYNONYMOUS_CODING(MISSENSE|Acg/Gcg|T185A|None|Vigan.08G140200.01)Vigna nepalensis
12387073AT652667.771.00DOWNSTREAM(|2412||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387131CA612458.771.00DOWNSTREAM(|2470||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387319AT632836.771.00DOWNSTREAM(|2658||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387329TC612847.771.00DOWNSTREAM(|2668||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387338GC582626.771.00DOWNSTREAM(|2677||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387347CT552446.771.00DOWNSTREAM(|2686||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387353CT572626.771.00DOWNSTREAM(|2692||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387381TC472221.771.00DOWNSTREAM(|2720||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387404AG472131.771.00DOWNSTREAM(|2743||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387421TC452041.771.00DOWNSTREAM(|2760||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387426TC452258.771.00DOWNSTREAM(|2765||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387436GA321501.771.00DOWNSTREAM(|2775||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387479GA11373.771.00DOWNSTREAM(|2818||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387553GA381532.771.00DOWNSTREAM(|2892||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387597CT401770.771.00DOWNSTREAM(|2936||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387740TA632801.771.00DOWNSTREAM(|3079||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387745AG612726.771.00DOWNSTREAM(|3084||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387781TC602304.770.98DOWNSTREAM(|3120||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387929GA482001.771.00DOWNSTREAM(|3268||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12388130AC491966.771.00DOWNSTREAM(|3469||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12388381GA612336.771.00DOWNSTREAM(|3720||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12388425GA733226.771.00DOWNSTREAM(|3764||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12388434CT703110.771.00DOWNSTREAM(|3773||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12388610CG582581.771.00DOWNSTREAM(|3949||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12388611AT582581.771.00DOWNSTREAM(|3950||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12388748GT441782.771.00DOWNSTREAM(|4087||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12388866AT722851.771.00DOWNSTREAM(|4205||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12388956TG592273.771.00DOWNSTREAM(|4295||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12388985CA612495.771.00DOWNSTREAM(|4324||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12389277TC602335.771.00DOWNSTREAM(|4616||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12389398GA602327.771.00DOWNSTREAM(|4737||None|Vigan.08G140100.01), SYNONYMOUS_CODING(SILENT|ttC/ttT|F107|None|Vigan.08G140200.01)Vigna nepalensis
12389803AT431813.771.00INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12390381GC501939.771.00START_GAINED(|||None|Vigan.08G140200.01), UTR_5_PRIME(|66||None|Vigan.08G140200.01)Vigna nepalensis
12390510GA441968.771.00START_GAINED(|||None|Vigan.08G140200.01), UTR_5_PRIME(|195||None|Vigan.08G140200.01)Vigna nepalensis
12390511TC451968.771.00UTR_5_PRIME(|196||None|Vigan.08G140200.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
12387358TTAA552617.731.00DOWNSTREAM(|2698||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387360TTGCCCT542572.731.00DOWNSTREAM(|2700||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387506CCCTAAGT16815.731.00DOWNSTREAM(|2846||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387535ACA29994.731.00DOWNSTREAM(|2875||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387603ATA371704.731.00DOWNSTREAM(|2943||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387609CTCGAATATTC361632.731.00DOWNSTREAM(|2949||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12387987ATGA451926.731.00DOWNSTREAM(|3327||None|Vigan.08G140100.01), INTRON(|||None|Vigan.08G140200.01)Vigna nepalensis
12390598CCATTA462028.731.00UTR_5_PRIME(|284||None|Vigan.08G140200.01)Vigna nepalensis