Variant information

Chr07:978767 - 981939

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
978952GA502034.771.00DOWNSTREAM(|1711||None|Vigan.07G014600.01), UTR_5_PRIME(|223||None|Vigan.07G014700.01)Vigna nepalensis
979111GA592263.771.00DOWNSTREAM(|1870||None|Vigan.07G014600.01), UTR_5_PRIME(|64||None|Vigan.07G014700.01)Vigna nepalensis
979240CT501963.771.00DOWNSTREAM(|1999||None|Vigan.07G014600.01), DOWNSTREAM(|4974||None|Vigan.07G014800.01), SYNONYMOUS_CODING(SILENT|ccC/ccT|P22|None|Vigan.07G014700.01)Vigna nepalensis
979660AC481865.771.00DOWNSTREAM(|2419||None|Vigan.07G014600.01), DOWNSTREAM(|4554||None|Vigan.07G014800.01), SYNONYMOUS_CODING(SILENT|gcA/gcC|A162|None|Vigan.07G014700.01)Vigna nepalensis
979975TC582206.771.00DOWNSTREAM(|2734||None|Vigan.07G014600.01), DOWNSTREAM(|4239||None|Vigan.07G014800.01), INTRON(|||None|Vigan.07G014700.01)Vigna nepalensis
980107CT703146.771.00DOWNSTREAM(|2866||None|Vigan.07G014600.01), DOWNSTREAM(|4107||None|Vigan.07G014800.01), INTRON(|||None|Vigan.07G014700.01)Vigna nepalensis
980110AT723180.771.00DOWNSTREAM(|2869||None|Vigan.07G014600.01), DOWNSTREAM(|4104||None|Vigan.07G014800.01), INTRON(|||None|Vigan.07G014700.01)Vigna nepalensis
980375CT722761.771.00DOWNSTREAM(|3134||None|Vigan.07G014600.01), DOWNSTREAM(|3839||None|Vigan.07G014800.01), INTRON(|||None|Vigan.07G014700.01)Vigna nepalensis
980428CG682715.771.00DOWNSTREAM(|3187||None|Vigan.07G014600.01), DOWNSTREAM(|3786||None|Vigan.07G014800.01), INTRON(|||None|Vigan.07G014700.01)Vigna nepalensis
980494GT662504.771.00DOWNSTREAM(|3253||None|Vigan.07G014600.01), DOWNSTREAM(|3720||None|Vigan.07G014800.01), INTRON(|||None|Vigan.07G014700.01)Vigna nepalensis
980686AT461869.771.00DOWNSTREAM(|3445||None|Vigan.07G014600.01), DOWNSTREAM(|3528||None|Vigan.07G014800.01), INTRON(|||None|Vigan.07G014700.01)Vigna nepalensis
980793GC522166.771.00DOWNSTREAM(|3421||None|Vigan.07G014800.01), DOWNSTREAM(|3552||None|Vigan.07G014600.01), INTRON(|||None|Vigan.07G014700.01)Vigna nepalensis
980914TC451836.771.00DOWNSTREAM(|3300||None|Vigan.07G014800.01), DOWNSTREAM(|3673||None|Vigan.07G014600.01), DOWNSTREAM(|4964||None|Vigan.07G014900.01), INTRON(|||None|Vigan.07G014700.01)Vigna nepalensis
981051AG642865.771.00DOWNSTREAM(|3163||None|Vigan.07G014800.01), DOWNSTREAM(|3810||None|Vigan.07G014600.01), DOWNSTREAM(|4827||None|Vigan.07G014900.01), INTRON(|||None|Vigan.07G014700.01)Vigna nepalensis
981055CT652864.771.00DOWNSTREAM(|3159||None|Vigan.07G014800.01), DOWNSTREAM(|3814||None|Vigan.07G014600.01), DOWNSTREAM(|4823||None|Vigan.07G014900.01), INTRON(|||None|Vigan.07G014700.01)Vigna nepalensis
981114TC602253.771.00DOWNSTREAM(|3100||None|Vigan.07G014800.01), DOWNSTREAM(|3873||None|Vigan.07G014600.01), DOWNSTREAM(|4764||None|Vigan.07G014900.01), INTRON(|||None|Vigan.07G014700.01)Vigna nepalensis
981173AC582271.771.00DOWNSTREAM(|3041||None|Vigan.07G014800.01), DOWNSTREAM(|3932||None|Vigan.07G014600.01), DOWNSTREAM(|4705||None|Vigan.07G014900.01), INTRON(|||None|Vigan.07G014700.01)Vigna nepalensis
981404AG501965.771.00DOWNSTREAM(|2810||None|Vigan.07G014800.01), DOWNSTREAM(|4163||None|Vigan.07G014600.01), DOWNSTREAM(|4474||None|Vigan.07G014900.01), SYNONYMOUS_CODING(SILENT|acA/acG|T246|None|Vigan.07G014700.01)Vigna nepalensis
981684TC602413.771.00DOWNSTREAM(|2530||None|Vigan.07G014800.01), DOWNSTREAM(|4194||None|Vigan.07G014900.01), DOWNSTREAM(|4443||None|Vigan.07G014600.01), UTR_3_PRIME(|25||None|Vigan.07G014700.01)Vigna nepalensis
981730GA632457.771.00DOWNSTREAM(|2484||None|Vigan.07G014800.01), DOWNSTREAM(|4148||None|Vigan.07G014900.01), DOWNSTREAM(|4489||None|Vigan.07G014600.01), UTR_3_PRIME(|71||None|Vigan.07G014700.01)Vigna nepalensis
981871GA431672.771.00DOWNSTREAM(|2343||None|Vigan.07G014800.01), DOWNSTREAM(|4007||None|Vigan.07G014900.01), DOWNSTREAM(|4630||None|Vigan.07G014600.01), UTR_3_PRIME(|212||None|Vigan.07G014700.01)Vigna nepalensis
981934GA441925.771.00DOWNSTREAM(|2280||None|Vigan.07G014800.01), DOWNSTREAM(|3944||None|Vigan.07G014900.01), DOWNSTREAM(|4693||None|Vigan.07G014600.01), UTR_3_PRIME(|275||None|Vigan.07G014700.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
980570CCT642521.731.00DOWNSTREAM(|3330||None|Vigan.07G014600.01), DOWNSTREAM(|3643||None|Vigan.07G014800.01), INTRON(|||None|Vigan.07G014700.01)Vigna nepalensis