VIGGS:Variant information

Chr07:7884902 - 7888314

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
7885058	G	T	46	1785.77	1.00	START_GAINED(\|\|\|None\|Vigan.07G091300.01), UTR_5_PRIME(\|473\|\|None\|Vigan.07G091300.01)	Vigna nepalensis
7885121	A	G	34	1282.77	1.00	UTR_5_PRIME(\|410\|\|None\|Vigan.07G091300.01)	Vigna nepalensis
7885242	C	T	46	1657.77	1.00	UTR_5_PRIME(\|289\|\|None\|Vigan.07G091300.01)	Vigna nepalensis
7885311	T	C	32	1350.77	1.00	UTR_5_PRIME(\|220\|\|None\|Vigan.07G091300.01)	Vigna nepalensis
7885352	C	T	21	869.77	1.00	START_GAINED(\|\|\|None\|Vigan.07G091300.01), UTR_5_PRIME(\|179\|\|None\|Vigan.07G091300.01)	Vigna nepalensis
7886502	T	G	48	1971.77	1.00	INTRON(\|\|\|None\|Vigan.07G091300.01), UPSTREAM(\|4816\|\|None\|Vigan.07G091400.01)	Vigna nepalensis
7886655	T	C	58	2315.77	1.00	INTRON(\|\|\|None\|Vigan.07G091300.01), UPSTREAM(\|4663\|\|None\|Vigan.07G091400.01)	Vigna nepalensis
7886759	T	C	51	2031.77	1.00	INTRON(\|\|\|None\|Vigan.07G091300.01), UPSTREAM(\|4559\|\|None\|Vigan.07G091400.01)	Vigna nepalensis
7887652	T	C	41	1623.77	1.00	INTRON(\|\|\|None\|Vigan.07G091300.01), UPSTREAM(\|3666\|\|None\|Vigan.07G091400.01)	Vigna nepalensis
7887888	G	A	31	1177.77	1.00	SYNONYMOUS_CODING(SILENT\|ggG/ggA\|G190\|None\|Vigan.07G091300.01), UPSTREAM(\|3430\|\|None\|Vigan.07G091400.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
7885279	CA	C	35	1208.73	1.00	UTR_5_PRIME(\|251\|\|None\|Vigan.07G091300.01)	Vigna nepalensis
7885334	AG	A	29	1354.73	1.00	UTR_5_PRIME(\|196\|\|None\|Vigan.07G091300.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
7885944	(CTT)9	(CTT)10	40	1832.73	1.00	INTRON(\|\|\|None\|Vigan.07G091300.01)	Vigna nepalensis