Variant information

Chr06:7358617 - 7365669

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
7358844TA441647.771.00UPSTREAM(|1457||None|Vigan.06G053000.01), UTR_5_PRIME(|4||None|Vigan.06G053100.01)Vigna nepalensis
7359112CA552197.771.00INTRON(|||None|Vigan.06G053100.01), UPSTREAM(|1725||None|Vigan.06G053000.01)Vigna nepalensis
7359875CT652565.771.00SYNONYMOUS_CODING(SILENT|caC/caT|H115|None|Vigan.06G053100.01), UPSTREAM(|2488||None|Vigan.06G053000.01)Vigna nepalensis
7360129CG602291.771.00INTRON(|||None|Vigan.06G053100.01), UPSTREAM(|2742||None|Vigan.06G053000.01)Vigna nepalensis
7360323TA461857.771.00INTRON(|||None|Vigan.06G053100.01), UPSTREAM(|2936||None|Vigan.06G053000.01)Vigna nepalensis
7360385AT552243.771.00INTRON(|||None|Vigan.06G053100.01), UPSTREAM(|2998||None|Vigan.06G053000.01)Vigna nepalensis
7360442GT602407.771.00INTRON(|||None|Vigan.06G053100.01), UPSTREAM(|3055||None|Vigan.06G053000.01)Vigna nepalensis
7361030CG702681.771.00INTRON(|||None|Vigan.06G053100.01), UPSTREAM(|3643||None|Vigan.06G053000.01)Vigna nepalensis
7361063TC652468.771.00INTRON(|||None|Vigan.06G053100.01), UPSTREAM(|3676||None|Vigan.06G053000.01)Vigna nepalensis
7361145TG592313.771.00INTRON(|||None|Vigan.06G053100.01), UPSTREAM(|3758||None|Vigan.06G053000.01)Vigna nepalensis
7362582TC431750.771.00SYNONYMOUS_CODING(SILENT|tgT/tgC|C549|None|Vigan.06G053100.01)Vigna nepalensis
7363014AT512255.771.00SYNONYMOUS_CODING(SILENT|gcA/gcT|A693|None|Vigan.06G053100.01)Vigna nepalensis
7363017TC512255.771.00SYNONYMOUS_CODING(SILENT|acT/acC|T694|None|Vigan.06G053100.01)Vigna nepalensis
7363134GA481870.771.00SYNONYMOUS_CODING(SILENT|cgG/cgA|R733|None|Vigan.06G053100.01)Vigna nepalensis
7363223AC592635.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363237AC622850.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363242TA602878.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363244GA622743.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363293TC532243.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363351CG733246.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363358TG723388.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363463TC472216.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363473CT542335.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363520CG582633.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363648GT602456.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363686CT642508.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363705GC612790.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363713AC652855.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363750CA572271.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363766GT562262.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363791GA491986.771.00SYNONYMOUS_CODING(SILENT|ttG/ttA|L745|None|Vigan.06G053100.01)Vigna nepalensis
7364186TA512256.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7364187CT502256.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7364316TG502111.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7364419AC452041.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7364454AG331456.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7364467AG311366.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7364468CT311366.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7364487TC241096.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7364563TG15489.771.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7365560AG511869.771.00UPSTREAM(|4377||None|Vigan.06G053200.01), UTR_3_PRIME(|306||None|Vigan.06G053100.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
7359510GGA37973.731.00INTRON(|||None|Vigan.06G053100.01), UPSTREAM(|2124||None|Vigan.06G053000.01)Vigna nepalensis
7363310CCAAGAGAATCATGTTTAGAACATGTAAACTTAAGATTGTGTCCTATAATGT543893.731.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363355TAT723282.731.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363367AATT753409.731.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363535ACA733057.731.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7363620GGATCCAT693219.731.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7364353CATTCTCACAAAACCATCTCTTTTATTTACTTATTCGGAAGTTTGTTTAAGCTTAACTGC482212.731.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7364843CAATC532347.731.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7364876TTTATA512313.731.00INTRON(|||None|Vigan.06G053100.01)Vigna nepalensis
7365483AGTTA572483.731.00UPSTREAM(|4453||None|Vigan.06G053200.01), UTR_3_PRIME(|230||None|Vigan.06G053100.01)Vigna nepalensis
7365549CCT481364.731.00UPSTREAM(|4387||None|Vigan.06G053200.01), UTR_3_PRIME(|296||None|Vigan.06G053100.01)Vigna nepalensis