Variant information

Chr06:6461389 - 6469222

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
6461655TC501997.771.00UTR_5_PRIME(|24||None|Vigan.06G049700.01)Vigna nepalensis
6461783TA461861.771.00SYNONYMOUS_CODING(SILENT|atT/atA|I35|None|Vigan.06G049700.01)Vigna nepalensis
6461828AT552014.771.00SYNONYMOUS_CODING(SILENT|ggA/ggT|G50|None|Vigan.06G049700.01)Vigna nepalensis
6462126TG642561.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6462194CA682836.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6462248AG622506.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6462261AT592422.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6462294TA622485.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6462506TC602636.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6462729TC542134.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6462811CA582598.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6462892CA482076.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6462904GA532436.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6462911CT532447.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6463116AG492014.771.00SYNONYMOUS_CODING(SILENT|ctA/ctG|L99|None|Vigan.06G049700.01)Vigna nepalensis
6463152CT431616.771.00SYNONYMOUS_CODING(SILENT|gaC/gaT|D111|None|Vigan.06G049700.01)Vigna nepalensis
6463224TC461808.771.00SYNONYMOUS_CODING(SILENT|aaT/aaC|N135|None|Vigan.06G049700.01)Vigna nepalensis
6463374AG481899.771.00SYNONYMOUS_CODING(SILENT|gcA/gcG|A185|None|Vigan.06G049700.01)Vigna nepalensis
6463672CT491917.771.00SYNONYMOUS_CODING(SILENT|acC/acT|T248|None|Vigan.06G049700.01)Vigna nepalensis
6463745AG441747.771.00NON_SYNONYMOUS_CODING(MISSENSE|Agc/Ggc|S273G|None|Vigan.06G049700.01)Vigna nepalensis
6463793AT502074.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6463979AG572306.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6464061CG692844.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6464156CT632467.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6464411GT462065.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6464666AG752904.770.99INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6464798AC693129.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6464970TC742903.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465027GA743074.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465045CG733041.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465094AG622549.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465204CA592600.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465299GC622416.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465336GA441867.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465437AC522089.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465494AG592586.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465515AG612660.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465744GA471717.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465763CG381715.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465766GA381690.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465808TC411640.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465861TC682609.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6466072CT612744.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6466079CG592663.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6466154TC692706.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6466254AG582391.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6466329TA642530.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6466353TC692773.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6466365GA682611.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6466420TG582308.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6466510GT562291.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6466777TA441715.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6466856TA562179.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6467103AG612468.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6467243TC592349.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6467664GA321245.771.00SYNONYMOUS_CODING(SILENT|ctG/ctA|L291|None|Vigan.06G049700.01)Vigna nepalensis
6467937CT532118.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6468058CT502132.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6468150CT542401.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6468151GA542401.771.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6468237GA482016.771.00NON_SYNONYMOUS_CODING(MISSENSE|aGg/aAg|R322K|None|Vigan.06G049700.01)Vigna nepalensis
6468700TA521256.770.96INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
6462327CAC682344.731.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6462420ATA441477.731.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6462496CTC542502.731.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6462788TTC552512.731.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6464125AATTGTTCATCATACAT572796.731.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6464399TCTGT441924.731.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6464805CCA693277.731.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6464821TAAT723283.731.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6465210GGT612698.731.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6466127GGC592078.731.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6466230ACATGA582562.731.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6467455AATTTTTAGGCTTAGTTGTCTTGGTGGTTTTCTATTATTCCA879.730.62INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6467614TGT21749.731.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6467903AATA592401.731.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis
6468693ATA532364.731.00INTRON(|||None|Vigan.06G049700.01)Vigna nepalensis