Variant information

Chr06:4147299 - 4153893

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
4147809AT652576.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4147974TA662599.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4148022CT532183.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4148178GA562218.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4148207CT501890.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4148390GT522095.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4148408CA481979.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4148648TG562269.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4148779TC652573.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4148841AG642560.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4148861CG512033.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149226TG451778.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149267AG582545.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149281AC562442.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149308AT552438.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149324AG632723.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149352CT562246.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149393AG592294.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149423AT521963.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149511CG632803.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149515TC622772.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149587GT452032.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149590TA472068.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149656CA471919.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149713TC562253.771.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149899CA481712.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|4952||None|Vigan.06G036000.01)Vigna nepalensis
4149980TC562294.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|4871||None|Vigan.06G036000.01)Vigna nepalensis
4150148GA562217.771.00SYNONYMOUS_CODING(SILENT|taC/taT|Y147|None|Vigan.06G035900.01), UPSTREAM(|4703||None|Vigan.06G036000.01)Vigna nepalensis
4150276CA652859.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|4575||None|Vigan.06G036000.01)Vigna nepalensis
4150290AT632774.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|4561||None|Vigan.06G036000.01)Vigna nepalensis
4150331CA692731.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|4520||None|Vigan.06G036000.01)Vigna nepalensis
4150472CT582454.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|4379||None|Vigan.06G036000.01)Vigna nepalensis
4150518AG582557.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|4333||None|Vigan.06G036000.01)Vigna nepalensis
4150524GA582565.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|4327||None|Vigan.06G036000.01)Vigna nepalensis
4150656AT562306.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|4195||None|Vigan.06G036000.01)Vigna nepalensis
4150771AG552029.770.96INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|4080||None|Vigan.06G036000.01)Vigna nepalensis
4150830CA712812.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|4021||None|Vigan.06G036000.01)Vigna nepalensis
4150899GA622421.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3952||None|Vigan.06G036000.01)Vigna nepalensis
4150965AT602319.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3886||None|Vigan.06G036000.01)Vigna nepalensis
4150991GA612521.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3860||None|Vigan.06G036000.01)Vigna nepalensis
4151031TG522373.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3820||None|Vigan.06G036000.01)Vigna nepalensis
4151032CA542373.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3819||None|Vigan.06G036000.01)Vigna nepalensis
4151064CA612427.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3787||None|Vigan.06G036000.01)Vigna nepalensis
4151177AG481938.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3674||None|Vigan.06G036000.01)Vigna nepalensis
4151234GC532441.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3617||None|Vigan.06G036000.01)Vigna nepalensis
4151242GA612771.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3609||None|Vigan.06G036000.01)Vigna nepalensis
4151245AG622726.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3606||None|Vigan.06G036000.01)Vigna nepalensis
4151301AG602527.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3550||None|Vigan.06G036000.01)Vigna nepalensis
4151649CT572243.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3202||None|Vigan.06G036000.01)Vigna nepalensis
4151702CA612363.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3149||None|Vigan.06G036000.01)Vigna nepalensis
4151922GA582560.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2929||None|Vigan.06G036000.01)Vigna nepalensis
4151955CA622790.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2896||None|Vigan.06G036000.01)Vigna nepalensis
4151957AG622790.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2894||None|Vigan.06G036000.01)Vigna nepalensis
4152087GA672752.771.00SYNONYMOUS_CODING(SILENT|gtC/gtT|V91|None|Vigan.06G035900.01), UPSTREAM(|2764||None|Vigan.06G036000.01)Vigna nepalensis
4152252AT572545.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2599||None|Vigan.06G036000.01)Vigna nepalensis
4152254AG562545.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2597||None|Vigan.06G036000.01)Vigna nepalensis
4152325GA562284.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2526||None|Vigan.06G036000.01)Vigna nepalensis
4152451CG552210.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2400||None|Vigan.06G036000.01)Vigna nepalensis
4152519CG763431.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2332||None|Vigan.06G036000.01)Vigna nepalensis
4152579AG702783.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2272||None|Vigan.06G036000.01)Vigna nepalensis
4152591AG642570.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2260||None|Vigan.06G036000.01)Vigna nepalensis
4152661GA672645.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2190||None|Vigan.06G036000.01)Vigna nepalensis
4152711CT662817.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2140||None|Vigan.06G036000.01)Vigna nepalensis
4152742AT632521.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2109||None|Vigan.06G036000.01)Vigna nepalensis
4152813TG572569.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2038||None|Vigan.06G036000.01)Vigna nepalensis
4152815AG582569.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2036||None|Vigan.06G036000.01)Vigna nepalensis
4152974GC522025.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|1877||None|Vigan.06G036000.01)Vigna nepalensis
4153111TA472112.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|1740||None|Vigan.06G036000.01)Vigna nepalensis
4153161CT401568.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|1690||None|Vigan.06G036000.01)Vigna nepalensis
4153239CA502020.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|1612||None|Vigan.06G036000.01)Vigna nepalensis
4153469AT552201.771.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|1382||None|Vigan.06G036000.01)Vigna nepalensis
4153721AG411577.771.00UPSTREAM(|1130||None|Vigan.06G036000.01), UTR_5_PRIME(|20||None|Vigan.06G035900.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
4148076AACAGGCTGTGTACGATAAATA562483.731.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4148105CTC582610.731.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4148121AGA572549.731.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4149448AAAGATGC512385.731.00INTRON(|||None|Vigan.06G035900.01)Vigna nepalensis
4150620GGAGAGAAGACAGGCAGAAAAGGTTATTTTTGTATTGGTATTGATAAAATGTACAAA422897.731.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|4230||None|Vigan.06G036000.01)Vigna nepalensis
4150980AAT581933.731.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3870||None|Vigan.06G036000.01)Vigna nepalensis
4151722CTC572097.731.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|3128||None|Vigan.06G036000.01)Vigna nepalensis
4151920ACA582551.731.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2930||None|Vigan.06G036000.01)Vigna nepalensis
4152523AATG793631.731.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|2327||None|Vigan.06G036000.01)Vigna nepalensis
4153118CAC472072.731.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|1732||None|Vigan.06G036000.01)Vigna nepalensis
4153215TAGT461889.731.00INTRON(|||None|Vigan.06G035900.01), UPSTREAM(|1635||None|Vigan.06G036000.01)Vigna nepalensis