Variant information

Chr06:3479150 - 3484489

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
3479200AC371451.771.00DOWNSTREAM(|1531||None|Vigan.06G030100.01), UTR_3_PRIME(|531||None|Vigan.06G030200.01)Vigna nepalensis
3480355TC702748.771.00DOWNSTREAM(|2686||None|Vigan.06G030100.01), INTRON(|||None|Vigan.06G030200.01), UPSTREAM(|3851||None|Vigan.06G030300.01)Vigna nepalensis
3480398AC652553.771.00DOWNSTREAM(|2729||None|Vigan.06G030100.01), INTRON(|||None|Vigan.06G030200.01), UPSTREAM(|3808||None|Vigan.06G030300.01)Vigna nepalensis
3480432TC602327.771.00DOWNSTREAM(|2763||None|Vigan.06G030100.01), INTRON(|||None|Vigan.06G030200.01), UPSTREAM(|3774||None|Vigan.06G030300.01)Vigna nepalensis
3480566TC642448.771.00DOWNSTREAM(|2897||None|Vigan.06G030100.01), INTRON(|||None|Vigan.06G030200.01), UPSTREAM(|3640||None|Vigan.06G030300.01)Vigna nepalensis
3481397GA451833.771.00DOWNSTREAM(|3728||None|Vigan.06G030100.01), INTRON(|||None|Vigan.06G030200.01), UPSTREAM(|2809||None|Vigan.06G030300.01)Vigna nepalensis
3481737AC381445.771.00DOWNSTREAM(|4068||None|Vigan.06G030100.01), INTRON(|||None|Vigan.06G030200.01), UPSTREAM(|2469||None|Vigan.06G030300.01)Vigna nepalensis
3483172TA542072.771.00INTRON(|||None|Vigan.06G030200.01), UPSTREAM(|1034||None|Vigan.06G030300.01)Vigna nepalensis
3483186TG542154.771.00INTRON(|||None|Vigan.06G030200.01), UPSTREAM(|1020||None|Vigan.06G030300.01)Vigna nepalensis
3483958TC522140.771.00INTRON(|||None|Vigan.06G030200.01), UPSTREAM(|248||None|Vigan.06G030300.01)Vigna nepalensis
3484372AG552446.771.00NON_SYNONYMOUS_CODING(MISSENSE|aAa/aGa|K56R|None|Vigan.06G030300.01), START_GAINED(|||None|Vigan.06G030200.01), UTR_5_PRIME(|211||None|Vigan.06G030200.01)Vigna nepalensis
3484373AT552446.771.00NON_SYNONYMOUS_CODING(MISSENSE|aaA/aaT|K56N|None|Vigan.06G030300.01), UTR_5_PRIME(|212||None|Vigan.06G030200.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
3479157CCTG461990.731.00DOWNSTREAM(|1489||None|Vigan.06G030100.01), UTR_3_PRIME(|573||None|Vigan.06G030200.01)Vigna nepalensis
3483985GAAAAAAAAACCAG512285.731.00INTRON(|||None|Vigan.06G030200.01), UPSTREAM(|220||None|Vigan.06G030300.01)Vigna nepalensis
3484004ACA582499.731.00INTRON(|||None|Vigan.06G030200.01), UPSTREAM(|201||None|Vigan.06G030300.01)Vigna nepalensis