Variant information

Chr06:34537359 - 34545342

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
34537494AT552094.771.00UTR_5_PRIME(|244||None|Vigan.06G211100.01)Vigna nepalensis
34537899TC421813.771.00SYNONYMOUS_CODING(SILENT|cgT/cgC|R54|None|Vigan.06G211100.01)Vigna nepalensis
34538198GA572501.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34538208GA522319.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34538332TC662683.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34538922GA512032.771.00SYNONYMOUS_CODING(SILENT|aaG/aaA|K123|None|Vigan.06G211100.01)Vigna nepalensis
34539107CT592402.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34539124CA592323.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34539215CT642607.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34539267AG592407.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34539357AT632377.770.98INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34539375AC652616.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34539474TC512033.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34540011TC441751.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34540283CT622416.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34540350TG562219.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34540410TG341589.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34540419TG361582.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34540450TA301301.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34540467TA30588.770.93INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34540510GT401666.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34540865TG572238.771.00NON_SYNONYMOUS_CODING(MISSENSE|gTt/gGt|V240G|None|Vigan.06G211100.01)Vigna nepalensis
34541153CT471885.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34541297GA512046.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34541469AG532057.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34541651TC522015.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34541688TA552136.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34541765TC492181.771.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34542050TC471968.771.00DOWNSTREAM(|4824||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34542156AT451796.771.00DOWNSTREAM(|4718||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34542799GA602493.771.00DOWNSTREAM(|4075||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34542966TG532456.771.00DOWNSTREAM(|3908||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34542973CA602619.771.00DOWNSTREAM(|3901||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34543042AG582262.771.00DOWNSTREAM(|3832||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34543074TC502248.771.00DOWNSTREAM(|3800||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34543098AC522342.771.00DOWNSTREAM(|3776||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34543211CT622416.771.00DOWNSTREAM(|3663||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34543297GC502336.771.00DOWNSTREAM(|3577||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34543300CT542369.771.00DOWNSTREAM(|3574||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34543402CT411680.771.00DOWNSTREAM(|3472||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34543585AG482085.771.00DOWNSTREAM(|3289||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34543898GA592347.771.00DOWNSTREAM(|2976||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34543977GA542401.771.00DOWNSTREAM(|2897||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34543978GC542401.771.00DOWNSTREAM(|2896||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34544110CT522107.771.00DOWNSTREAM(|2764||None|Vigan.06G211200.01), SYNONYMOUS_CODING(SILENT|ccC/ccT|P443|None|Vigan.06G211100.01)Vigna nepalensis
34545029AG491906.771.00DOWNSTREAM(|1845||None|Vigan.06G211200.01), UTR_3_PRIME(|288||None|Vigan.06G211100.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
34537906GTCCCG431852.731.00INTRON(|||None|Vigan.06G211100.01), SPLICE_SITE_DONOR(|||None|Vigan.06G211100.01)Vigna nepalensis
34538204AAT552502.731.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34538413GGT371281.731.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34538486CTTC27920.731.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34538737TTCATA502280.731.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34539302AAT642355.731.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34539432TAT542020.731.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34539898ATA461547.731.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34539903ATA451362.731.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34539926TTGTG572526.731.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34540408CTC341580.731.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34540602GGT411236.731.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34541751TGATCCTCGAAT462097.731.00INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34543494GAAAAG462032.731.00DOWNSTREAM(|3379||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis
34543599CTAC572508.731.00DOWNSTREAM(|3274||None|Vigan.06G211200.01), INTRON(|||None|Vigan.06G211100.01)Vigna nepalensis