Variant information

Chr06:31535216 - 31539979

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 [SNPs] [SSR-associated indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
31535492CA461875.771.00UTR_3_PRIME(|1306||None|Vigan.06G180000.01)Vigna nepalensis
31536165GT471828.771.00UTR_3_PRIME(|633||None|Vigan.06G180000.01)Vigna nepalensis
31536463AT521979.771.00UTR_3_PRIME(|335||None|Vigan.06G180000.01)Vigna nepalensis
31536637TC552238.771.00UTR_3_PRIME(|161||None|Vigan.06G180000.01)Vigna nepalensis
31537080CA562327.771.00SYNONYMOUS_CODING(SILENT|ctG/ctT|L491|None|Vigan.06G180000.01)Vigna nepalensis
31537130TA512155.771.00INTRON(|||None|Vigan.06G180000.01)Vigna nepalensis
31537466TA451687.771.00SYNONYMOUS_CODING(SILENT|ggA/ggT|G483|None|Vigan.06G180000.01)Vigna nepalensis
31537498TC481921.771.00NON_SYNONYMOUS_CODING(MISSENSE|Aac/Gac|N473D|None|Vigan.06G180000.01)Vigna nepalensis
31537876GA562247.771.00SYNONYMOUS_CODING(SILENT|Ctg/Ttg|L347|None|Vigan.06G180000.01)Vigna nepalensis
31538047AG562180.771.00INTRON(|||None|Vigan.06G180000.01)Vigna nepalensis
31538918TC491860.771.00INTRON(|||None|Vigan.06G180000.01)Vigna nepalensis

SSR-associated indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
31535384(GA)9(GA)10391289.730.97UTR_3_PRIME(|1413||None|Vigan.06G180000.01)Vigna nepalensis