Variant information

Chr06:19665421 - 19671831

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
19665485TC652694.771.00UPSTREAM(|1741||None|Vigan.06G104200.01), UTR_3_PRIME(|164||None|Vigan.06G104300.01)Vigna nepalensis
19665739TA642360.771.00SYNONYMOUS_CODING(SILENT|cgA/cgT|R157|None|Vigan.06G104300.01), UPSTREAM(|1995||None|Vigan.06G104200.01)Vigna nepalensis
19665864CG572095.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|2120||None|Vigan.06G104200.01)Vigna nepalensis
19666144TG542169.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|2400||None|Vigan.06G104200.01)Vigna nepalensis
19666530GA652650.771.00SYNONYMOUS_CODING(SILENT|ctC/ctT|L92|None|Vigan.06G104300.01), UPSTREAM(|2786||None|Vigan.06G104200.01)Vigna nepalensis
19666562CT762833.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|2818||None|Vigan.06G104200.01)Vigna nepalensis
19666694TC512229.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|2950||None|Vigan.06G104200.01)Vigna nepalensis
19666708TC492136.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|2964||None|Vigan.06G104200.01)Vigna nepalensis
19666774AG502007.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|3030||None|Vigan.06G104200.01)Vigna nepalensis
19667282GA522355.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|3538||None|Vigan.06G104200.01)Vigna nepalensis
19667288GA542387.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|3544||None|Vigan.06G104200.01)Vigna nepalensis
19667346TC542127.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|3602||None|Vigan.06G104200.01)Vigna nepalensis
19667472GA612464.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|3728||None|Vigan.06G104200.01)Vigna nepalensis
19667673CG471769.770.98INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|3929||None|Vigan.06G104200.01)Vigna nepalensis
19667701AG482006.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|3957||None|Vigan.06G104200.01)Vigna nepalensis
19667724GT522281.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|3980||None|Vigan.06G104200.01)Vigna nepalensis
19667809TC582426.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4065||None|Vigan.06G104200.01)Vigna nepalensis
19667848TC472048.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4104||None|Vigan.06G104200.01)Vigna nepalensis
19667983AG431766.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4239||None|Vigan.06G104200.01)Vigna nepalensis
19668054AG321234.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4310||None|Vigan.06G104200.01)Vigna nepalensis
19668067AG361468.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4323||None|Vigan.06G104200.01)Vigna nepalensis
19668099GA291210.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4355||None|Vigan.06G104200.01)Vigna nepalensis
19668146GC381480.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4402||None|Vigan.06G104200.01)Vigna nepalensis
19668190GA371414.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4446||None|Vigan.06G104200.01)Vigna nepalensis
19668212AG311349.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4468||None|Vigan.06G104200.01)Vigna nepalensis
19668428GA522452.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4684||None|Vigan.06G104200.01)Vigna nepalensis
19668442AG502368.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4698||None|Vigan.06G104200.01)Vigna nepalensis
19668488GA461821.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4744||None|Vigan.06G104200.01)Vigna nepalensis
19668552AG492224.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4808||None|Vigan.06G104200.01)Vigna nepalensis
19668558TC502221.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4814||None|Vigan.06G104200.01)Vigna nepalensis
19668567CA502266.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4823||None|Vigan.06G104200.01)Vigna nepalensis
19668624CT331456.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4880||None|Vigan.06G104200.01)Vigna nepalensis
19668627AG351520.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4883||None|Vigan.06G104200.01)Vigna nepalensis
19668671GA26997.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4927||None|Vigan.06G104200.01)Vigna nepalensis
19668698AG311402.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4954||None|Vigan.06G104200.01)Vigna nepalensis
19668702CT331442.771.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4958||None|Vigan.06G104200.01)Vigna nepalensis
19668791CA22866.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19669028AG401550.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19669278CT642441.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19669356AG552186.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19669417CT552522.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19669421AT562485.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19669505GA502013.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19669745GT562184.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19669756AC542110.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19669769GT542117.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19669805AG612331.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19669840AG632529.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19670175GT612542.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19670297TC622477.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19670409TC522128.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19670486TA542129.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19670537AC662999.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19670538TG652999.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19670603CT572280.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19670627GA682665.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19670646TC592362.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19671228AT742747.731.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19671255CT712821.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19671436CT522011.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19671485GA512028.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19671535TA662535.771.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19671656GA471794.771.00SYNONYMOUS_CODING(SILENT|ttC/ttT|F13|None|Vigan.06G104300.01)Vigna nepalensis
19671822AT502057.771.00UTR_5_PRIME(|128||None|Vigan.06G104300.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
19667829TTA512329.731.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4086||None|Vigan.06G104200.01)Vigna nepalensis
19668000TGT411402.731.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4257||None|Vigan.06G104200.01)Vigna nepalensis
19668210CAC301340.731.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4467||None|Vigan.06G104200.01)Vigna nepalensis
19668411GGA482117.731.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4668||None|Vigan.06G104200.01)Vigna nepalensis
19668570AAAACA512257.731.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4827||None|Vigan.06G104200.01)Vigna nepalensis
19668575AATG512257.731.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4832||None|Vigan.06G104200.01)Vigna nepalensis
19668657GGC27962.731.00INTRON(|||None|Vigan.06G104300.01), UPSTREAM(|4914||None|Vigan.06G104200.01)Vigna nepalensis
19668917CTC22768.731.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19669051GGTGAG562430.731.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19670274CCAT612736.731.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis
19670503CCTATT532468.731.00INTRON(|||None|Vigan.06G104300.01)Vigna nepalensis