Variant information

Chr05:8166607 - 8169312

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 [SNPs] [Indels] [SSR-associated indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
8166679TC662500.771.00DOWNSTREAM(|2869||None|Vigan.05G105900.01), DOWNSTREAM(|3384||None|Vigan.05G106100.01), UTR_5_PRIME(|5||None|Vigan.05G106000.01)Vigna nepalensis
8166946CT441784.771.00DOWNSTREAM(|3117||None|Vigan.05G106100.01), DOWNSTREAM(|3136||None|Vigan.05G105900.01), INTRON(|||None|Vigan.05G106000.01)Vigna nepalensis
8167923TC471858.771.00DOWNSTREAM(|2140||None|Vigan.05G106100.01), DOWNSTREAM(|4113||None|Vigan.05G105900.01), INTRON(|||None|Vigan.05G106000.01)Vigna nepalensis
8168045CT592320.771.00DOWNSTREAM(|2018||None|Vigan.05G106100.01), DOWNSTREAM(|4235||None|Vigan.05G105900.01), INTRON(|||None|Vigan.05G106000.01)Vigna nepalensis
8168072AG572322.771.00DOWNSTREAM(|1991||None|Vigan.05G106100.01), DOWNSTREAM(|4262||None|Vigan.05G105900.01), INTRON(|||None|Vigan.05G106000.01)Vigna nepalensis
8168164AG542416.771.00DOWNSTREAM(|1899||None|Vigan.05G106100.01), DOWNSTREAM(|4354||None|Vigan.05G105900.01), INTRON(|||None|Vigan.05G106000.01)Vigna nepalensis
8168170CA532404.771.00DOWNSTREAM(|1893||None|Vigan.05G106100.01), DOWNSTREAM(|4360||None|Vigan.05G105900.01), INTRON(|||None|Vigan.05G106000.01)Vigna nepalensis
8168392AG532156.771.00DOWNSTREAM(|1671||None|Vigan.05G106100.01), DOWNSTREAM(|4582||None|Vigan.05G105900.01), INTRON(|||None|Vigan.05G106000.01)Vigna nepalensis
8168588CA582310.771.00DOWNSTREAM(|1475||None|Vigan.05G106100.01), DOWNSTREAM(|4778||None|Vigan.05G105900.01), INTRON(|||None|Vigan.05G106000.01), SPLICE_SITE_REGION(|||None|Vigan.05G106000.01)Vigna nepalensis
8168627GA501950.771.00DOWNSTREAM(|1436||None|Vigan.05G106100.01), DOWNSTREAM(|4817||None|Vigan.05G105900.01), INTRON(|||None|Vigan.05G106000.01)Vigna nepalensis
8169272GA431695.771.00DOWNSTREAM(|791||None|Vigan.05G106100.01), UTR_3_PRIME(|106||None|Vigan.05G106000.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
8166998TTTGT652841.731.00DOWNSTREAM(|3064||None|Vigan.05G106100.01), DOWNSTREAM(|3189||None|Vigan.05G105900.01), INTRON(|||None|Vigan.05G106000.01)Vigna nepalensis
8168681GGC471890.731.00DOWNSTREAM(|1381||None|Vigan.05G106100.01), DOWNSTREAM(|4872||None|Vigan.05G105900.01), INTRON(|||None|Vigan.05G106000.01)Vigna nepalensis

SSR-associated indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
8167411(AT)26(AT)12281097.731.00DOWNSTREAM(|2651||None|Vigan.05G106100.01), DOWNSTREAM(|3602||None|Vigan.05G105900.01), INTRON(|||None|Vigan.05G106000.01)Vigna nepalensis