Variant information

Chr05:3384323 - 3392029

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
3384506GC612325.771.00DOWNSTREAM(|4130||None|Vigan.05G047800.01), UTR_5_PRIME(|523||None|Vigan.05G047900.01)Vigna nepalensis
3384928AG622376.771.00DOWNSTREAM(|4552||None|Vigan.05G047800.01), START_GAINED(|||None|Vigan.05G047900.01), UTR_5_PRIME(|101||None|Vigan.05G047900.01)Vigna nepalensis
3385009CT602414.771.00DOWNSTREAM(|4633||None|Vigan.05G047800.01), UTR_5_PRIME(|20||None|Vigan.05G047900.01)Vigna nepalensis
3385109GA481956.771.00DOWNSTREAM(|4733||None|Vigan.05G047800.01), SYNONYMOUS_CODING(SILENT|cgG/cgA|R27|None|Vigan.05G047900.01)Vigna nepalensis
3385137GA532369.771.00DOWNSTREAM(|4761||None|Vigan.05G047800.01), INTRON(|||None|Vigan.05G047900.01)Vigna nepalensis
3385144GT542381.771.00DOWNSTREAM(|4768||None|Vigan.05G047800.01), INTRON(|||None|Vigan.05G047900.01)Vigna nepalensis
3385346GT431761.771.00DOWNSTREAM(|4970||None|Vigan.05G047800.01), INTRON(|||None|Vigan.05G047900.01)Vigna nepalensis
3385440CA522035.771.00INTRON(|||None|Vigan.05G047900.01)Vigna nepalensis
3385504AG592374.771.00INTRON(|||None|Vigan.05G047900.01)Vigna nepalensis
3385687CT481786.771.00INTRON(|||None|Vigan.05G047900.01)Vigna nepalensis
3386232CT592430.771.00INTRON(|||None|Vigan.05G047900.01)Vigna nepalensis
3386404AG471923.771.00SYNONYMOUS_CODING(SILENT|acA/acG|T101|None|Vigan.05G047900.01)Vigna nepalensis
3386863GA662686.771.00INTRON(|||None|Vigan.05G047900.01)Vigna nepalensis
3387142TA582226.771.00INTRON(|||None|Vigan.05G047900.01)Vigna nepalensis
3387589AT491977.771.00INTRON(|||None|Vigan.05G047900.01)Vigna nepalensis
3387767CA481877.771.00INTRON(|||None|Vigan.05G047900.01)Vigna nepalensis
3388193AG582370.771.00SYNONYMOUS_CODING(SILENT|acA/acG|T315|None|Vigan.05G047900.01)Vigna nepalensis
3388299GT572304.771.00INTRON(|||None|Vigan.05G047900.01)Vigna nepalensis
3388443CG602379.771.00NON_SYNONYMOUS_CODING(MISSENSE|aCc/aGc|T334S|None|Vigan.05G047900.01)Vigna nepalensis
3390006CT732852.771.00INTRON(|||None|Vigan.05G047900.01), UPSTREAM(|4546||None|Vigan.05G048000.01)Vigna nepalensis
3391026TG572269.771.00INTRON(|||None|Vigan.05G047900.01), UPSTREAM(|3526||None|Vigan.05G048000.01)Vigna nepalensis
3391499GA592361.771.00SYNONYMOUS_CODING(SILENT|ttG/ttA|L848|None|Vigan.05G047900.01), UPSTREAM(|3053||None|Vigan.05G048000.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
3384706GGTGA341528.731.00DOWNSTREAM(|4331||None|Vigan.05G047800.01), UTR_5_PRIME(|322||None|Vigan.05G047900.01)Vigna nepalensis
3390426TTA591826.731.00INTRON(|||None|Vigan.05G047900.01), UPSTREAM(|4125||None|Vigan.05G048000.01)Vigna nepalensis