VIGGS:Variant information

Chr05:3144065 - 3146427

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
3144278	G	A	53	2001.77	1.00	UTR_5_PRIME(\|24\|\|None\|Vigan.05G044800.01)	Vigna nepalensis
3144532	C	T	35	1262.77	1.00	SYNONYMOUS_CODING(SILENT\|ttC/ttT\|F77\|None\|Vigan.05G044800.01)	Vigna nepalensis
3145203	T	C	58	2272.77	1.00	DOWNSTREAM(\|4384\|\|None\|Vigan.05G044900.01), INTRON(\|\|\|None\|Vigan.05G044800.01)	Vigna nepalensis
3145342	G	T	50	2283.77	1.00	DOWNSTREAM(\|4245\|\|None\|Vigan.05G044900.01), INTRON(\|\|\|None\|Vigan.05G044800.01)	Vigna nepalensis
3145542	A	G	71	2848.77	1.00	DOWNSTREAM(\|4045\|\|None\|Vigan.05G044900.01), INTRON(\|\|\|None\|Vigan.05G044800.01)	Vigna nepalensis
3145622	T	G	70	2937.77	1.00	DOWNSTREAM(\|3965\|\|None\|Vigan.05G044900.01), INTRON(\|\|\|None\|Vigan.05G044800.01)	Vigna nepalensis
3145691	G	T	54	2225.77	1.00	DOWNSTREAM(\|3896\|\|None\|Vigan.05G044900.01), INTRON(\|\|\|None\|Vigan.05G044800.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
3144099	GT	G	57	1988.73	1.00	UTR_5_PRIME(\|202\|\|None\|Vigan.05G044800.01)	Vigna nepalensis
3144896	C	CCTT	51	2331.73	1.00	DOWNSTREAM(\|4690\|\|None\|Vigan.05G044900.01), INTRON(\|\|\|None\|Vigan.05G044800.01)	Vigna nepalensis
3145107	CT	C	68	2134.73	1.00	DOWNSTREAM(\|4479\|\|None\|Vigan.05G044900.01), INTRON(\|\|\|None\|Vigan.05G044800.01)	Vigna nepalensis
3145353	G	GTCGT	55	2466.73	1.00	DOWNSTREAM(\|4233\|\|None\|Vigan.05G044900.01), INTRON(\|\|\|None\|Vigan.05G044800.01)	Vigna nepalensis
3146389	G	GTTAATGAAGCAGCGCAATCATTATTCATAGCTTTGGC	63	3749.73	1.00	DOWNSTREAM(\|3197\|\|None\|Vigan.05G044900.01), UTR_3_PRIME(\|326\|\|None\|Vigan.05G044800.01)	Vigna nepalensis