Variant information

Chr05:2768346 - 2769868

Filter



 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
2768370AT301321.771.00DOWNSTREAM(|1951||None|Vigan.05G041200.01), INTRON(|||None|Vigan.05G041000.01), START_GAINED(|||None|Vigan.05G041100.01), UTR_5_PRIME(|220||None|Vigan.05G041100.01)Vigna nepalensis
2768371GC301321.771.00DOWNSTREAM(|1950||None|Vigan.05G041200.01), INTRON(|||None|Vigan.05G041000.01), START_GAINED(|||None|Vigan.05G041100.01), UTR_5_PRIME(|219||None|Vigan.05G041100.01)Vigna nepalensis
2768466TG602021.771.00DOWNSTREAM(|1855||None|Vigan.05G041200.01), INTRON(|||None|Vigan.05G041000.01), START_GAINED(|||None|Vigan.05G041100.01), UTR_5_PRIME(|124||None|Vigan.05G041100.01)Vigna nepalensis
2768533TC31546.770.61DOWNSTREAM(|1788||None|Vigan.05G041200.01), INTRON(|||None|Vigan.05G041000.01), UTR_5_PRIME(|57||None|Vigan.05G041100.01)Vigna nepalensis
2768973AT28672.770.71DOWNSTREAM(|1348||None|Vigan.05G041200.01), INTRON(|||None|Vigan.05G041100.01), INTRON(|||None|Vigan.05G041000.01)Vigna nepalensis
2769180GC391340.771.00DOWNSTREAM(|1141||None|Vigan.05G041200.01), START_GAINED(|||None|Vigan.05G041000.01), SYNONYMOUS_CODING(SILENT|gcG/gcC|A43|None|Vigan.05G041100.01), UTR_5_PRIME(|3729||None|Vigan.05G041000.01)Vigna nepalensis
2769252GT35869.770.80DOWNSTREAM(|1069||None|Vigan.05G041200.01), SYNONYMOUS_CODING(SILENT|ccG/ccT|P67|None|Vigan.05G041100.01), UTR_5_PRIME(|3801||None|Vigan.05G041000.01)Vigna nepalensis
2769283GC39100.770.15DOWNSTREAM(|1038||None|Vigan.05G041200.01), NON_SYNONYMOUS_CODING(MISSENSE|Gag/Cag|E78Q|None|Vigan.05G041100.01), START_GAINED(|||None|Vigan.05G041000.01), UTR_5_PRIME(|3832||None|Vigan.05G041000.01)Vigna nepalensis
2769705TC431571.771.00DOWNSTREAM(|616||None|Vigan.05G041200.01), UPSTREAM(|111||None|Vigan.05G041000.01), UTR_3_PRIME(|51||None|Vigan.05G041100.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
2768373GTG291312.731.00DOWNSTREAM(|1947||None|Vigan.05G041200.01), INTRON(|||None|Vigan.05G041000.01), UTR_5_PRIME(|216||None|Vigan.05G041100.01)Vigna nepalensis
2768806TAT41431.00DOWNSTREAM(|1514||None|Vigan.05G041200.01), INTRON(|||None|Vigan.05G041100.01), INTRON(|||None|Vigan.05G041000.01)Vigna nepalensis
2768895CCCA8355.741.00DOWNSTREAM(|1425||None|Vigan.05G041200.01), INTRON(|||None|Vigan.05G041100.01), INTRON(|||None|Vigan.05G041000.01)Vigna nepalensis
2769670TGT531861.731.00DOWNSTREAM(|650||None|Vigan.05G041200.01), UPSTREAM(|77||None|Vigan.05G041000.01), UTR_3_PRIME(|17||None|Vigan.05G041100.01)Vigna nepalensis
2769827GGAACACACC532464.731.00DOWNSTREAM(|493||None|Vigan.05G041200.01), UPSTREAM(|234||None|Vigan.05G041000.01), UTR_3_PRIME(|174||None|Vigan.05G041100.01)Vigna nepalensis