VIGGS:Variant information

Chr05:136643 - 142324

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
137154	C	T	85	3802.77	1.00	INTRON(\|\|\|None\|Vigan.05G002200.01)	Vigna nepalensis
137163	A	T	87	3752.77	1.00	INTRON(\|\|\|None\|Vigan.05G002200.01)	Vigna nepalensis
137872	T	C	88	3558.77	1.00	SYNONYMOUS_CODING(SILENT\|atT/atC\|I135\|None\|Vigan.05G002200.01)	Vigna nepalensis
138451	A	G	98	4398.77	1.00	INTRON(\|\|\|None\|Vigan.05G002200.01), UPSTREAM(\|4959\|\|None\|Vigan.05G002300.01)	Vigna nepalensis
138963	T	C	87	3523.77	1.00	INTRON(\|\|\|None\|Vigan.05G002200.01), UPSTREAM(\|4447\|\|None\|Vigan.05G002300.01)	Vigna nepalensis
139165	C	G	91	3700.77	1.00	INTRON(\|\|\|None\|Vigan.05G002200.01), UPSTREAM(\|4245\|\|None\|Vigan.05G002300.01)	Vigna nepalensis
139193	T	C	99	4365.77	1.00	INTRON(\|\|\|None\|Vigan.05G002200.01), UPSTREAM(\|4217\|\|None\|Vigan.05G002300.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
137164	C	CT	78	2162.73	0.99	INTRON(\|\|\|None\|Vigan.05G002200.01)	Vigna nepalensis
137176	AT	A	77	2246.73	1.00	INTRON(\|\|\|None\|Vigan.05G002200.01)	Vigna nepalensis
138077	C	CTGGAAATTCATATAATAATAGCAAGAGGCATTCCCCAGGATATTTCGATTATAAACATCGTACATGTGTTTAATGTTAATAGTCTCATCATATTAATAGCTCATGAAGTGCTAACTCGCCCCTTTGGTTGTTTTTCTTAAATTTTCATGT	70	5743.73	1.00	INTRON(\|\|\|None\|Vigan.05G002200.01)	Vigna nepalensis
138150	CA	C	86	3017.73	1.00	INTRON(\|\|\|None\|Vigan.05G002200.01)	Vigna nepalensis