VIGGS:Variant information

Chr05:11880652 - 11885177

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
11881310	A	C	49	1911.77	1.00	DOWNSTREAM(\|2315\|\|None\|Vigan.05G145000.01), INTRON(\|\|\|None\|Vigan.05G144900.01), UPSTREAM(\|4654\|\|None\|Vigan.05G144800.01)	Vigna nepalensis
11881441	T	A	54	2179.77	1.00	DOWNSTREAM(\|2184\|\|None\|Vigan.05G145000.01), INTRON(\|\|\|None\|Vigan.05G144900.01), UPSTREAM(\|4785\|\|None\|Vigan.05G144800.01), UPSTREAM(\|4878\|\|None\|Vigan.05G145100.01)	Vigna nepalensis
11884244	C	A	46	1836.77	1.00	INTRON(\|\|\|None\|Vigan.05G145000.01), UPSTREAM(\|2075\|\|None\|Vigan.05G145100.01), UTR_3_PRIME(\|908\|\|None\|Vigan.05G144900.01)	Vigna nepalensis
11884614	G	A	56	2479.77	1.00	INTRON(\|\|\|None\|Vigan.05G145000.01), UPSTREAM(\|1705\|\|None\|Vigan.05G145100.01), UTR_3_PRIME(\|1278\|\|None\|Vigan.05G144900.01)	Vigna nepalensis
11884778	A	T	58	2322.77	1.00	INTRON(\|\|\|None\|Vigan.05G145000.01), UPSTREAM(\|1541\|\|None\|Vigan.05G145100.01), UTR_3_PRIME(\|1442\|\|None\|Vigan.05G144900.01)	Vigna nepalensis
11884797	T	A	54	2212.77	1.00	INTRON(\|\|\|None\|Vigan.05G145000.01), UPSTREAM(\|1522\|\|None\|Vigan.05G145100.01), UTR_3_PRIME(\|1461\|\|None\|Vigan.05G144900.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
11881624	TA	T	58	1726.73	1.00	DOWNSTREAM(\|2000\|\|None\|Vigan.05G145000.01), INTRON(\|\|\|None\|Vigan.05G144900.01), UPSTREAM(\|4694\|\|None\|Vigan.05G145100.01), UPSTREAM(\|4969\|\|None\|Vigan.05G144800.01)	Vigna nepalensis
11884612	AT	A	56	2470.73	1.00	INTRON(\|\|\|None\|Vigan.05G145000.01), UPSTREAM(\|1706\|\|None\|Vigan.05G145100.01), UTR_3_PRIME(\|1277\|\|None\|Vigan.05G144900.01)	Vigna nepalensis