Variant information

Chr05:11581812 - 11587496

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
11581871AG522231.771.00DOWNSTREAM(|2654||None|Vigan.05G141900.01), UTR_5_PRIME(|140||None|Vigan.05G142000.01)Vigna nepalensis
11581887AC602565.771.00DOWNSTREAM(|2670||None|Vigan.05G141900.01), START_GAINED(|||None|Vigan.05G142000.01), UTR_5_PRIME(|124||None|Vigan.05G142000.01)Vigna nepalensis
11582518CT441823.771.00DOWNSTREAM(|3301||None|Vigan.05G141900.01), SYNONYMOUS_CODING(SILENT|Ctg/Ttg|L43|None|Vigan.05G142000.01)Vigna nepalensis
11582870TC492050.771.00DOWNSTREAM(|3653||None|Vigan.05G141900.01), SPLICE_SITE_REGION(|||None|Vigan.05G142000.01), SYNONYMOUS_CODING(SILENT|atT/atC|I80|None|Vigan.05G142000.01)Vigna nepalensis
11582912AG411652.771.00DOWNSTREAM(|3695||None|Vigan.05G141900.01), SYNONYMOUS_CODING(SILENT|ccA/ccG|P94|None|Vigan.05G142000.01)Vigna nepalensis
11582926AG441754.771.00DOWNSTREAM(|3709||None|Vigan.05G141900.01), NON_SYNONYMOUS_CODING(MISSENSE|aAt/aGt|N99S|None|Vigan.05G142000.01)Vigna nepalensis
11583050GC572250.771.00DOWNSTREAM(|3833||None|Vigan.05G141900.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11583371CT592661.771.00DOWNSTREAM(|4154||None|Vigan.05G141900.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11583711CA592391.771.00DOWNSTREAM(|4494||None|Vigan.05G141900.01), DOWNSTREAM(|4663||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11583802TC582375.771.00DOWNSTREAM(|4572||None|Vigan.05G142100.01), DOWNSTREAM(|4585||None|Vigan.05G141900.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11584468GA501888.771.00DOWNSTREAM(|3906||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11584480GA532146.771.00DOWNSTREAM(|3894||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11584644CT391589.771.00DOWNSTREAM(|3730||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11584737TG411691.771.00DOWNSTREAM(|3637||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11584823TG512285.771.00DOWNSTREAM(|3551||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11584827AG512330.771.00DOWNSTREAM(|3547||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11584828CG512266.771.00DOWNSTREAM(|3546||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11584918GT592351.771.00DOWNSTREAM(|3456||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11585022AG752972.771.00DOWNSTREAM(|3352||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11585121TC501970.771.00DOWNSTREAM(|3253||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11585220GC401557.771.00DOWNSTREAM(|3154||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11585383GT542014.771.00DOWNSTREAM(|2991||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11585529GA452029.771.00DOWNSTREAM(|2845||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11585533CA432176.771.00DOWNSTREAM(|2841||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11585534AT442086.771.00DOWNSTREAM(|2840||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11585542CT412036.771.00DOWNSTREAM(|2832||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11585546AT401856.771.00DOWNSTREAM(|2828||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11585868AC491829.771.00DOWNSTREAM(|2506||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11586005CT592366.771.00DOWNSTREAM(|2369||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11586043TC592338.771.00DOWNSTREAM(|2331||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11586454AT572526.771.00DOWNSTREAM(|1920||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11586466TC552455.771.00DOWNSTREAM(|1908||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11586749GC562167.771.00DOWNSTREAM(|1625||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11586832TG471915.771.00DOWNSTREAM(|1542||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11587254TA632540.771.00DOWNSTREAM(|1120||None|Vigan.05G142100.01), UTR_3_PRIME(|147||None|Vigan.05G142000.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
11581934CCTTTTC441943.731.00DOWNSTREAM(|2718||None|Vigan.05G141900.01), UTR_5_PRIME(|72||None|Vigan.05G142000.01)Vigna nepalensis
11583367CCT582588.731.00DOWNSTREAM(|4151||None|Vigan.05G141900.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11583493GGAT592678.731.00DOWNSTREAM(|4277||None|Vigan.05G141900.01), DOWNSTREAM(|4880||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11584083AAAGA733154.731.00DOWNSTREAM(|4290||None|Vigan.05G142100.01), DOWNSTREAM(|4867||None|Vigan.05G141900.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11585526GGT451975.731.00DOWNSTREAM(|2847||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11585614ATCA451895.731.00DOWNSTREAM(|2759||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11585912AACTA552378.731.00DOWNSTREAM(|2461||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11586186AAT481353.731.00DOWNSTREAM(|2187||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11586427AATC602593.731.00DOWNSTREAM(|1946||None|Vigan.05G142100.01), INTRON(|||None|Vigan.05G142000.01)Vigna nepalensis
11587183GTG491433.731.00DOWNSTREAM(|1190||None|Vigan.05G142100.01), UTR_3_PRIME(|77||None|Vigan.05G142000.01)Vigna nepalensis
11587490CCT471305.731.00DOWNSTREAM(|883||None|Vigan.05G142100.01), UTR_3_PRIME(|384||None|Vigan.05G142000.01)Vigna nepalensis