Variant information

Chr05:10878799 - 10883014

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
10879524TC461863.771.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|4357||None|Vigan.05G134100.01)Vigna nepalensis
10879923AG561979.770.95INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|3958||None|Vigan.05G134100.01)Vigna nepalensis
10880002CG471841.771.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|3879||None|Vigan.05G134100.01)Vigna nepalensis
10880047GA552099.771.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|3834||None|Vigan.05G134100.01)Vigna nepalensis
10880348AG713071.771.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|3533||None|Vigan.05G134100.01)Vigna nepalensis
10880358GA673053.771.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|3523||None|Vigan.05G134100.01)Vigna nepalensis
10880434TA803152.771.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|3447||None|Vigan.05G134100.01)Vigna nepalensis
10880475AC823331.771.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|3406||None|Vigan.05G134100.01)Vigna nepalensis
10880538TA612339.771.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|3343||None|Vigan.05G134100.01)Vigna nepalensis
10880626CT662740.771.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|3255||None|Vigan.05G134100.01)Vigna nepalensis
10880822TG79794.770.28INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|3059||None|Vigan.05G134100.01)Vigna nepalensis
10880837TC69755.770.33INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|3044||None|Vigan.05G134100.01)Vigna nepalensis
10880874AG74848.770.31INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|3007||None|Vigan.05G134100.01)Vigna nepalensis
10880898CT79843.770.29INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2983||None|Vigan.05G134100.01)Vigna nepalensis
10880899TC80756.770.28INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2982||None|Vigan.05G134100.01)Vigna nepalensis
10880903TC81711.770.27INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2978||None|Vigan.05G134100.01)Vigna nepalensis
10880907GC83711.770.27INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2974||None|Vigan.05G134100.01)Vigna nepalensis
10880942CT81528.770.21INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2939||None|Vigan.05G134100.01)Vigna nepalensis
10880943AG81525.770.21INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2938||None|Vigan.05G134100.01)Vigna nepalensis
10880944CT79483.770.20INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2937||None|Vigan.05G134100.01)Vigna nepalensis
10880959TC73279.770.15INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2922||None|Vigan.05G134100.01)Vigna nepalensis
10880960CG72279.770.14INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2921||None|Vigan.05G134100.01)Vigna nepalensis
10880988TG712939.771.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2893||None|Vigan.05G134100.01)Vigna nepalensis
10881383GA511851.771.00SYNONYMOUS_CODING(SILENT|cgG/cgA|R187|None|Vigan.05G134000.01), UPSTREAM(|2498||None|Vigan.05G134100.01)Vigna nepalensis
10882178CT602520.771.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|1703||None|Vigan.05G134100.01)Vigna nepalensis
10882377AT752954.771.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|1504||None|Vigan.05G134100.01)Vigna nepalensis
10882918CG451660.771.00UPSTREAM(|963||None|Vigan.05G134100.01), UTR_3_PRIME(|171||None|Vigan.05G134000.01)Vigna nepalensis
10882971TC542102.771.00UPSTREAM(|910||None|Vigan.05G134100.01), UTR_3_PRIME(|224||None|Vigan.05G134000.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
10879453AAGT482049.731.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|4427||None|Vigan.05G134100.01)Vigna nepalensis
10879539GGTTT401686.730.97INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|4341||None|Vigan.05G134100.01)Vigna nepalensis
10879636AACA492206.731.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|4244||None|Vigan.05G134100.01)Vigna nepalensis
10879639GGT492205.731.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|4241||None|Vigan.05G134100.01)Vigna nepalensis
10880166TTAG542370.731.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|3714||None|Vigan.05G134100.01)Vigna nepalensis
10880860TATAATTCT78729.730.28INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|3020||None|Vigan.05G134100.01)Vigna nepalensis
10880915TCT80702.730.28INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2965||None|Vigan.05G134100.01)Vigna nepalensis
10880917ATGTA82696.730.27INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2963||None|Vigan.05G134100.01)Vigna nepalensis
10880930TCTATTGCT84555.730.21INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2950||None|Vigan.05G134100.01)Vigna nepalensis
10880946CAC731575.730.79INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2934||None|Vigan.05G134100.01)Vigna nepalensis
10880952ACA76354.730.18INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2928||None|Vigan.05G134100.01)Vigna nepalensis
10881608TTC632204.731.00INTRON(|||None|Vigan.05G134000.01), UPSTREAM(|2272||None|Vigan.05G134100.01)Vigna nepalensis