Variant information

Chr04:689218 - 693412

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 [SNPs] [Indels] [SSR-associated indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
689419GA17560.771.00DOWNSTREAM(|4861||None|Vigan.04G007900.01), UTR_3_PRIME(|471||None|Vigan.04G007800.01)Vigna nepalensis
689431GA17386.770.41DOWNSTREAM(|4849||None|Vigan.04G007900.01), UTR_3_PRIME(|459||None|Vigan.04G007800.01)Vigna nepalensis
689434CA17227.770.29DOWNSTREAM(|4846||None|Vigan.04G007900.01), UTR_3_PRIME(|456||None|Vigan.04G007800.01)Vigna nepalensis
691139TC512008.771.00DOWNSTREAM(|3141||None|Vigan.04G007900.01), INTRON(|||None|Vigan.04G007800.01)Vigna nepalensis
692650CA38809.770.92DOWNSTREAM(|1630||None|Vigan.04G007900.01), INTRON(|||None|Vigan.04G007800.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
689232GGA431149.731.00UTR_3_PRIME(|657||None|Vigan.04G007800.01)Vigna nepalensis
690632ATA561789.731.00DOWNSTREAM(|3647||None|Vigan.04G007900.01), INTRON(|||None|Vigan.04G007800.01)Vigna nepalensis
692171TTGACATTGTGCCCTAA17686.731.00DOWNSTREAM(|2108||None|Vigan.04G007900.01), INTRON(|||None|Vigan.04G007800.01)Vigna nepalensis
692565TTCA542370.731.00DOWNSTREAM(|1714||None|Vigan.04G007900.01), INTRON(|||None|Vigan.04G007800.01)Vigna nepalensis
692931GGAGAT251154.731.00DOWNSTREAM(|1348||None|Vigan.04G007900.01), INTRON(|||None|Vigan.04G007800.01)Vigna nepalensis

SSR-associated indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
692951(AG)10(AG)18302017.731.00DOWNSTREAM(|1328||None|Vigan.04G007900.01), INTRON(|||None|Vigan.04G007800.01)Vigna nepalensis