Variant information

Chr04:6536573 - 6541222

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
6536842CT481899.771.00SYNONYMOUS_CODING(SILENT|ttC/ttT|F42|None|Vigan.04G068400.01)Vigna nepalensis
6537042AG471793.771.00INTRON(|||None|Vigan.04G068400.01)Vigna nepalensis
6537223AT522025.771.00INTRON(|||None|Vigan.04G068400.01)Vigna nepalensis
6537935CT461790.771.00INTRON(|||None|Vigan.04G068400.01), UPSTREAM(|4539||None|Vigan.04G068500.01)Vigna nepalensis
6539050CA501970.771.00INTRON(|||None|Vigan.04G068400.01), UPSTREAM(|3424||None|Vigan.04G068500.01)Vigna nepalensis
6539363TA602417.771.00INTRON(|||None|Vigan.04G068400.01), UPSTREAM(|3111||None|Vigan.04G068500.01)Vigna nepalensis
6539527CT602405.771.00INTRON(|||None|Vigan.04G068400.01), UPSTREAM(|2947||None|Vigan.04G068500.01)Vigna nepalensis
6540825CT522074.771.00UPSTREAM(|1649||None|Vigan.04G068500.01), UTR_3_PRIME(|107||None|Vigan.04G068400.01)Vigna nepalensis
6540989CT612236.771.00UPSTREAM(|1485||None|Vigan.04G068500.01), UTR_3_PRIME(|271||None|Vigan.04G068400.01)Vigna nepalensis
6541125GA471828.771.00UPSTREAM(|1349||None|Vigan.04G068500.01), UTR_3_PRIME(|407||None|Vigan.04G068400.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
6537381CTTTTC12231.730.58INTRON(|||None|Vigan.04G068400.01)Vigna nepalensis
6538451AAAT703005.731.00INTRON(|||None|Vigan.04G068400.01), UPSTREAM(|4022||None|Vigan.04G068500.01)Vigna nepalensis
6538705CAC552014.731.00INTRON(|||None|Vigan.04G068400.01), UPSTREAM(|3768||None|Vigan.04G068500.01)Vigna nepalensis
6538872CTC471607.731.00INTRON(|||None|Vigan.04G068400.01), UPSTREAM(|3601||None|Vigan.04G068500.01)Vigna nepalensis
6538891GGTTTTT311492.731.00INTRON(|||None|Vigan.04G068400.01), UPSTREAM(|3582||None|Vigan.04G068500.01)Vigna nepalensis
6539566AGGAAAATCA562438.731.00INTRON(|||None|Vigan.04G068400.01), UPSTREAM(|2907||None|Vigan.04G068500.01)Vigna nepalensis